Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g02037 | ATGTTGGTGTTAGCGGAAAAAGACTCTCCTGCCAACCTTAGTTTACGAGGTTACGAGGTTATTGATGAGATTAAGGAGCAACTTGAGAACCAATGTCCTGGTGTTGTTTCTTGTGCTGACATTATCGCTATGGCTGCTAGAGATGCAGTCTTTTGGGCCGGGGGTCCGTTTTATGAGATACCGAAGGGAAGGAAAGACGGAAGCAGATCAAGAATCGAAGACACTGTCAATTTGCCTTCTCCTTTCTTAAATGCATCTCAGCTTATTAATACTTTCGCTCAACGCGGCTTTACCGTTCAACAAATGAGCACTGTCAAGAACTTGCAGCAATGGCGACAATGCACTCCAAACATTCGACGCCACACCCGACAGCTTCGACAACGTCTATTACAACGCTCTGTCGAGAGGTGCCGGAGTTCTGTTTTCAGACCAAACATTGTTCGCTAG | 447 | 46.09 | MLVLAEKDSPANLSLRGYEVIDEIKEQLENQCPGVVSCADIIAMAARDAVFWAGGPFYEIPKGRKDGSRSRIEDTVNLPSPFLNASQLINTFAQRGFTVQQMSTVKNLQQWRQCTPNIRRHTRQLRQRLLQRSVERCRSSVFRPNIVR | 148 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 28112257 | 28116222 | - | Lsi01G020370.1 | Lsi01g02037 | 654695 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g02037 | 148 | PRINTS | Plant peroxidase signature | 54 | 69 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | PRINTS | Plant peroxidase signature | 35 | 45 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | PRINTS | Plant peroxidase signature | 16 | 29 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | PANTHER | PEROXIDASE 25-RELATED | 4 | 104 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | Gene3D | - | 5 | 78 | - | - | |
Lsi01g02037 | 148 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 122 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | PRINTS | Haem peroxidase superfamily signature | 54 | 66 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | PRINTS | Haem peroxidase superfamily signature | 36 | 53 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | SUPERFAMILY | Heme-dependent peroxidases | 5 | 102 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g02037 | 148 | PANTHER | PEROXIDASE 47 | 4 | 104 | - | - | |
Lsi01g02037 | 148 | Gene3D | Peroxidase, domain 2 | 79 | 105 | - | - | |
Lsi01g02037 | 148 | Pfam | Peroxidase | 4 | 102 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g02037 | Lsi-Chr1:28112257 | Lsi01g00571 | Lsi-Chr1:4568992 | 7.43E-35 | dispersed | |
Lsi01g02037 | Lsi-Chr1:28112257 | Lsi11g01469 | Lsi-Chr11:23252468 | 1.53E-29 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g02037 | K00430 | - | csv:101202852 | 193.741 |