Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g02037 ATGTTGGTGTTAGCGGAAAAAGACTCTCCTGCCAACCTTAGTTTACGAGGTTACGAGGTTATTGATGAGATTAAGGAGCAACTTGAGAACCAATGTCCTGGTGTTGTTTCTTGTGCTGACATTATCGCTATGGCTGCTAGAGATGCAGTCTTTTGGGCCGGGGGTCCGTTTTATGAGATACCGAAGGGAAGGAAAGACGGAAGCAGATCAAGAATCGAAGACACTGTCAATTTGCCTTCTCCTTTCTTAAATGCATCTCAGCTTATTAATACTTTCGCTCAACGCGGCTTTACCGTTCAACAAATGAGCACTGTCAAGAACTTGCAGCAATGGCGACAATGCACTCCAAACATTCGACGCCACACCCGACAGCTTCGACAACGTCTATTACAACGCTCTGTCGAGAGGTGCCGGAGTTCTGTTTTCAGACCAAACATTGTTCGCTAG 447 46.09 MLVLAEKDSPANLSLRGYEVIDEIKEQLENQCPGVVSCADIIAMAARDAVFWAGGPFYEIPKGRKDGSRSRIEDTVNLPSPFLNASQLINTFAQRGFTVQQMSTVKNLQQWRQCTPNIRRHTRQLRQRLLQRSVERCRSSVFRPNIVR 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28112257 28116222 - Lsi01G020370.1 Lsi01g02037 654695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g02037 148 PRINTS Plant peroxidase signature 54 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 PRINTS Plant peroxidase signature 35 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 PRINTS Plant peroxidase signature 16 29 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 PANTHER PEROXIDASE 25-RELATED 4 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 Gene3D - 5 78 - -
Lsi01g02037 148 ProSiteProfiles Plant heme peroxidase family profile. 1 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 PRINTS Haem peroxidase superfamily signature 54 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 PRINTS Haem peroxidase superfamily signature 36 53 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 SUPERFAMILY Heme-dependent peroxidases 5 102 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lsi01g02037 148 PANTHER PEROXIDASE 47 4 104 - -
Lsi01g02037 148 Gene3D Peroxidase, domain 2 79 105 - -
Lsi01g02037 148 Pfam Peroxidase 4 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g02037 Lsi-Chr1:28112257 Lsi01g00571 Lsi-Chr1:4568992 7.43E-35 dispersed
Lsi01g02037 Lsi-Chr1:28112257 Lsi11g01469 Lsi-Chr11:23252468 1.53E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g02037 K00430 - csv:101202852 193.741