Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g02076 ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA 873 43.18 MSIPVQPPSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFREREEITTPNTTTTTLSTSTTLPLTQQTESSKCV 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29276903 29277775 - Lsi01G020760.1 Lsi01g02076 654734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g02076 290 Pfam Major Facilitator Superfamily 68 245 IPR011701 GO:0022857|GO:0055085
Lsi01g02076 290 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 272 - -
Lsi01g02076 290 Gene3D MFS general substrate transporter like domains 39 249 IPR036259 -
Lsi01g02076 290 SUPERFAMILY MFS general substrate transporter 35 249 IPR036259 -
Lsi01g02076 290 PANTHER FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 17 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g02076 Lsi-Chr1:29276903 Lsi04g00099 Lsi-Chr4:1126070 1.91E-103 dispersed
Lsi01g02076 Lsi-Chr1:29276903 Lsi04g00096 Lsi-Chr4:1102253 1.58E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g02076 - - csv:101220925 436.417