Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g02077 ATGGCGGAGGCAGCGGCCGCGGGTTTCTTGCACAAGCTGTTAACCGGACGGTGGTTAATGCTATTCGCATCACTAACCATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCGCCCGCATCAAATCCATTTTTCGTTACGATCAGTCGGCTCTTAATTTTATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTCGCACCACCGTGGCTGGTTCTCTCTGTTGGTGCCGTCCTCAACTTTTTCGCCTACTTCATGCTCTGGTCGGCGGTTTCTGGCCGGACCGCCGCACCGGGGCTGTGGTTGATGTGTGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTAAAGGATACATAGGTTTGAGTGGTGCAATAATGACGCAACTTTACCATGCCATGTATGGAGATGACGAACCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCTGCCATTTCATTAGCTTCCCTTCCATTCATTCGAATCATAAACACCATCAACCATCAACCACCAAGCCAACAACCTCAAACCATTCTATACCCTTCTTTACATATCCCTCGCCCTTGCCACTTCTCTCATTGCCATTACCATCCCTCAAACTAA 708 49.15 MAEAAAAGFLHKLLTGRWLMLFASLTIMAMNGSGYMFGLYSARIKSIFRYDQSALNFISFFKDLGGNLGVVSGLLYEVAPPWLVLSVGAVLNFFAYFMLWSAVSGRTAAPGLWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLKGYIGLSGAIMTQLYHAMYGDDEPEGLILMIAWLPSAISLASLPFIRIINTINHQPPSQQPQTILYPSLHIPRPCHFSHCHYHPSN 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29277894 29279793 - Lsi01G020770.1 Lsi01g02077 654735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g02077 235 Pfam Nodulin-like 17 204 IPR010658 -
Lsi01g02077 235 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 204 - -
Lsi01g02077 235 PANTHER FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 4 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g02077 Lsi-Chr1:29277894 Lsi04g00096 Lsi-Chr4:1102253 4.97E-78 dispersed
Lsi01g02077 Lsi-Chr1:29277894 Lsi08g00691 Lsi-Chr8:15212551 1.06E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g02077 - - csv:101220925 351.673