Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g02077 | ATGGCGGAGGCAGCGGCCGCGGGTTTCTTGCACAAGCTGTTAACCGGACGGTGGTTAATGCTATTCGCATCACTAACCATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCGCCCGCATCAAATCCATTTTTCGTTACGATCAGTCGGCTCTTAATTTTATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTCGCACCACCGTGGCTGGTTCTCTCTGTTGGTGCCGTCCTCAACTTTTTCGCCTACTTCATGCTCTGGTCGGCGGTTTCTGGCCGGACCGCCGCACCGGGGCTGTGGTTGATGTGTGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTAAAGGATACATAGGTTTGAGTGGTGCAATAATGACGCAACTTTACCATGCCATGTATGGAGATGACGAACCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCTGCCATTTCATTAGCTTCCCTTCCATTCATTCGAATCATAAACACCATCAACCATCAACCACCAAGCCAACAACCTCAAACCATTCTATACCCTTCTTTACATATCCCTCGCCCTTGCCACTTCTCTCATTGCCATTACCATCCCTCAAACTAA | 708 | 49.15 | MAEAAAAGFLHKLLTGRWLMLFASLTIMAMNGSGYMFGLYSARIKSIFRYDQSALNFISFFKDLGGNLGVVSGLLYEVAPPWLVLSVGAVLNFFAYFMLWSAVSGRTAAPGLWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLKGYIGLSGAIMTQLYHAMYGDDEPEGLILMIAWLPSAISLASLPFIRIINTINHQPPSQQPQTILYPSLHIPRPCHFSHCHYHPSN | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 29277894 | 29279793 | - | Lsi01G020770.1 | Lsi01g02077 | 654735 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g02077 | 235 | Pfam | Nodulin-like | 17 | 204 | IPR010658 | - | |
Lsi01g02077 | 235 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 4 | 204 | - | - | |
Lsi01g02077 | 235 | PANTHER | FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED | 4 | 204 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g02077 | Lsi-Chr1:29277894 | Lsi04g00096 | Lsi-Chr4:1102253 | 4.97E-78 | dispersed | |
Lsi01g02077 | Lsi-Chr1:29277894 | Lsi08g00691 | Lsi-Chr8:15212551 | 1.06E-79 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g02077 | - | - | csv:101220925 | 351.673 |