Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00005 ATGGATGCTTACATCGTAGACCCAATTTATATTGTTCAGGTGAAGCAGCATATATTCTTCAAAGATATTAACTGGGACACGCTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTTGATACTAGTTATTTTACAAGTCGCTACTCATGGAATCATTCAGATGATCATGTCTATCCACACAGTGAACTTGAAGATTCGAGTGATGCCGACAGCTTAAGTGGTGATAGTAGTTTAAGCAATCGTCAAGATGAAGTGGGAGATGAATGTGGGGGCCTTACAGATTTTGAGCCTGGTTCTTCTGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTCGCATCCATCAACTACGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAA 426 41.31 MDAYIVDPIYIVQVKQHIFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDHVYPHSELEDSSDADSLSGDSSLSNRQDEVGDECGGLTDFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPNHDA 141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 53420 56143 - Lsi02G000050.1 Lsi02g00005 654747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00005 141 Gene3D Phosphorylase Kinase; domain 1 38 54 - -
Lsi02g00005 141 Gene3D Transferase(Phosphotransferase) domain 1 12 37 - -
Lsi02g00005 141 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 139 - -
Lsi02g00005 141 MobiDBLite consensus disorder prediction 63 97 - -
Lsi02g00005 141 ProSiteProfiles AGC-kinase C-terminal domain profile. 21 124 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lsi02g00005 141 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 13 139 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00005 Lsi-Chr2:53420 Lsi09g00549 Lsi-Chr9:5801276 2.24E-39 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00005 - - csv:101214945 238.039