Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00007 ATGGGACGCTATGAATCATCATGGGGATGTTCTGAAGGATTAAGAAATTTAGATTTCTGTACGCCAGAGTCGTCTTATGATTGTGAAAATCCAAAGGAGTCTGAATCTCCGCGCTTTCAAGCTATACTCCGAGTCACAAGTGCTCCTCGAAGGAAGTATCCTGCTGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGCGTACGACCTTTTCCACTTTGGAAGTCACGTCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGCAAAATTTGACAAGGCAAAGGAAGAAGTAAATTCTGACTTGGCTATTTTTGCTGCTGATCTGGTTGGAGTTCTTGAAAAAAATGTCGATACTCATCCAGAGTGGCAAGAGACAATTGAAGATTTGTTGGTTTTAGCTCGAAGCTGTGCTATGTCATCCCCAGGTGAATTTTGGCTTCAATGTGAAAGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCTGGCATGCTGAAACAACTTCACACTCGAATGCTGTTCATTCTCACTAGGTGTACCAGGTTGCTGCAGTTCCATAAAGAAAGCGGCTTAGCTGAAGATGAAAATGTTTTTCAACTTCGTCAGTCGAGAAATCTGCATTCTGCTGATAAATGCATTGCTCCAGCTATGGTAAGGGAAATGAAAAGTTCAAGTGCAGCCAAGGCTTCTAAGACAACTTCTTCCAGGAAATCTTACAGCCAGGAGCAGCGTGGTTTGGATTGGAGCAGAGAACACGATATACCCCCTGGGAATAATGTCTCAACATCTCCTGATGATACTTCAAAGAACTTGGTATCTCCTACTGGCAGAGACAGGATGGCTTCTTGGAAAAGATTGCCTTCTCCAGCAGCAAAAAGTGTGAAAGAACCTACTTTGAAGGATCAGGGTGATAATAAGAAATTTAAAGCTTTGAACATGTCAAAAATCAGGATGGGTGTTTCTGAAACTGATTTGCCTGCTGCTAAGCTTTCTGAGCTTCCTCTGCCCAGAGATTCTCATGACCAACCTACAAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCAACTGTATGTGATGAGAGTTCAATAATTTGTCGCATTTGTGAAGAAGAAATTCCTACTGCAAATGTGGAAGATCATTCAAGAATTTGCGCAGTTGCTGATCGATGTGATCAAAAGGGTATAAGTGTTAATGAACGTCTACTTAGAATTGCTGAAACTTTAGAGAAGATGATCGAGTCTTTTACACAAAAGGATTCTCAGCATGTAGGAAGTCCGGATGTTGCAAAAGTTTCAAATTCTAGCGTGACCGAAGAATCTGATATTTCCCCAAAACATAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTAGATTGCTTCCATGAAACTGATAGTTCTGTATTTATGGATGACTTAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAAGGTATGACAACATCATCGGCTGGTAGCATGACTCCTAGATCTCCCTTATTAACACCAAGAACCAGTCAGTTTGACTTGTTTTTGGCAGGGAAAGATGTGCTTGCATGGGCGCCCCCCATCTTGGATGAAAAGGTAGGTTGCATGTGTGTCGGGGTTGGCCTATGGGGAAAAACACAGTTGGTTGGCATCGTGGTTGGATGCCCAAGTACATGGACTGGGCGCTCGTGTGCATGCCAAGGCCCATGA 1746 42.55 MGRYESSWGCSEGLRNLDFCTPESSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGVLEKNVDTHPEWQETIEDLLVLARSCAMSSPGEFWLQCESIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKCIAPAMVREMKSSSAAKASKTTSSRKSYSQEQRGLDWSREHDIPPGNNVSTSPDDTSKNLVSPTGRDRMASWKRLPSPAAKSVKEPTLKDQGDNKKFKALNMSKIRMGVSETDLPAAKLSELPLPRDSHDQPTKHQHKPSWGWGDQPTVCDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFTQKDSQHVGSPDVAKVSNSSVTEESDISPKHSDWSRRGSEDMLDCFHETDSSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKDVLAWAPPILDEKVGCMCVGVGLWGKTQLVGIVVGCPSTWTGRSCACQGP 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 88882 96057 - Lsi02G000070.1 Lsi02g00007 654749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00007 581 Coils Coil 407 427 - -
Lsi02g00007 581 MobiDBLite consensus disorder prediction 425 459 - -
Lsi02g00007 581 MobiDBLite consensus disorder prediction 231 248 - -
Lsi02g00007 581 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 4 514 - -
Lsi02g00007 581 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 514 - -
Lsi02g00007 581 MobiDBLite consensus disorder prediction 493 515 - -
Lsi02g00007 581 Coils Coil 80 100 - -
Lsi02g00007 581 MobiDBLite consensus disorder prediction 426 449 - -
Lsi02g00007 581 MobiDBLite consensus disorder prediction 261 281 - -
Lsi02g00007 581 MobiDBLite consensus disorder prediction 229 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00007 Lsi-Chr2:88882 Lsi09g00549 Lsi-Chr9:5801276 7.55E-127 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00007 - - csv:101214945 1004.2