Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00022 ATGGACACATTAACTCTGAGGAGAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTAGAAGCTCTTGATGAGATTGTTTCCTTCGTTTCTCGCTTCCATGGCTGTGAAGATGATGCTATAGAGCTTGTTCTCGACAATCTTCATGATGAATCTTTGAAATCTTCGATATTAGATAAGGATGCGGTGCATCGGGTTGTAAACATTATGCTTGCAGCTGATGAAGTGGGAGAAGAAAGTCCCACTACCGTTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTTATATCTCCAAGTTTCGTTATGATCCCATCAAAAAGATCTTCCATCTACACACTGGAAGCCTTCCAATTCATGGGGATGCTCCCGCTAAAGCTGCTCTATATAGAGATAGGTTTCTTCTGCTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCCGCTTTTGACATTGGCATGTCTCATTTCGGAAGTTGTGAGATTTCTCCTATTCAATCTCTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAATGCTATATCCTTTACTGGCATCTTCTATGATGTGGAAAAATTTAAACTTGTTTGA 684 41.96 MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGIFYDVEKFKLV 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 275676 276899 - Lsi02G000220.1 Lsi02g00022 654764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00022 227 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 7 219 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lsi02g00022 227 Gene3D - 1 73 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00022 Lsi-Chr2:275676 Lsi03g00650 Lsi-Chr3:8202243 4.15E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00022 K02325 - csv:101207444 378.252