Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00086 ATGAACCGTACATTCAATTCATACCCAGATGAAAATTATGCAAATGTTAGAAGATTGATGAGGCAGACTGTGGATGATGATCACAAGAGCCTATCGGACAAGGATCCGCACTGTGATTTGAAGAGCGACCACGAATTGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTTTGATGATGTTCATTTCTGTGATATTTTCGGTCTCTGTGGTTCTTAGAGATCCACCATCGGATGCTGTAAGTGAAGGTTCAGATGTGTGGATTTCTCAGTGGAACTCTGACCCAGTAGATTCTAAGGATGGAGATCTACATACGGTTATACAGCCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGGGGTTGGTTCTTGTGTCAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCTCATGAACCCTCTTCTTACTTAATCTCCAAATTGCGGAGTTATGAAGATCTTCATAAGCGTTGTGGAGTTTATACTGAATCTTACAACAAAACTTTGGAACAGCTCAAGTCTAATGGTAGTAGCAGCTTCTCAGACTGTAAATATCTTCTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTTGCTTCGGCGTTTCTTTATGCTCTCCTCACAAATCGTGTTCTTCTTGTTGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTTCCCCAAGATTTTCCATTAAAAGATGAGTTCAGCAAATTCAACCAGAACTCTCCTAATTGCTATGGTAAAATAATGAAGAATAGCATCACCCCAGATTCAAGTGGAATGATCTTGCCATCTGTTGTTTATCTTCATTTGGTCCATGATTATGATGACGATGATAAGCTTTTCTTCTGTGATCAAGACCAAGCTCTTTTGCAGCAATCTCCTTGGCTTGTTATGAAAACAGACAACTATTTTGTTCCATCTCTCTTTTTGATCCCATCATTTGAGAAAGAACTTAATGATCTTTTCCCAAAAAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTTCACCCGGTGAATTCGGTTTGGGGACTGATTACGAGATATTATCAAGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGGACTGGACCTTTTCAACACATCCTAGATCAGGTTCTGGACTGTACCCTGAAGGAGAATCTGTTGCCACAAACCGAGAGGCAAACCAATGTCGTTGGTCAAGCTAGTAATCAAAAGTCAAAGGCCGTGCTGATAACTTCCTTGAATGCTGGTTACTTTGAGAAGTTGAGAGATATTTACTGGGAGAATCCAACGGTAACAGGAGAGAGAATTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAAAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACCGATGTATTGGTCACCAGTTCATGGTCGACCTTCGGATACGTGGCTCAAGGTCTTGGCGGTCTAAAACCATGGATATTGTACAAACCCGAAAATCGTACTGCACCCGATCCACCTTGCCGTCGAGCCATGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTCGTTCCTCATGTGAAGCATTGCGAGGACATGGCCTGGGGACTTAAGTTGGTTGATCATTATGATTGA 1758 41.92 MNRTFNSYPDENYANVRRLMRQTVDDDHKSLSDKDPHCDLKSDHELKCGFSSIRVMGMFVVLMMFISVIFSVSVVLRDPPSDAVSEGSDVWISQWNSDPVDSKDGDLHTVIQPVDKLLSGLLSAKHGVGSCVSRYNSVAYQHKLAHEPSSYLISKLRSYEDLHKRCGVYTESYNKTLEQLKSNGSSSFSDCKYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKDEFSKFNQNSPNCYGKIMKNSITPDSSGMILPSVVYLHLVHDYDDDDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSFEKELNDLFPKKDTVFHFLGRYLFHPVNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERQTNVVGQASNQKSKAVLITSLNAGYFEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVKHCEDMAWGLKLVDHYD 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 722278 725396 - Lsi02G000860.1 Lsi02g00086 654828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00086 585 Gene3D - 188 241 - -
Lsi02g00086 585 Pfam Xyloglucan fucosyltransferase 109 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lsi02g00086 585 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 32 583 - -
Lsi02g00086 585 Gene3D - 368 532 - -
Lsi02g00086 585 PANTHER FUCOSYLTRANSFERASE 2-RELATED 32 583 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00086 Lsi-Chr2:722278 Lsi07g00815 Lsi-Chr7:9089321 4.59E-164 dispersed
Lsi02g00086 Lsi-Chr2:722278 Lsi04g00398 Lsi-Chr4:3907188 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00086 K13681 - csv:101219153 1076.62