Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g00155 | ATGGGTGGTGGTAGAAGAAGAAAGAAGCAACATTTCAGAAGGATTCATGCCTTTCCTTGTGGTAGAGCTTCTTTTAAAGATGAACACTCTTTAATTGGAGGGCCAGGCTTCTCAAGGGTAGTTTACTGTAATGATCCTGATAGTTTTGAGGCCAGTCTTCTCAACTATGGAGGCAATTATGTCAAAACTTCAAAGTATACTATTGCTTCATTCTTCCCCAAATCATTGTTTGAGCAATTCAGAAGAGTTGCCAACTTGTATTTCCTCCTTTGTGCTTTGCTTTCCTTTAGCCCTCTTTCGCCGTATTCGCCGGTCAGCAATGTTCTTCCTCTTGTTGTTGTTATTGGAGTCACCATGGGCAAAGAAGCTCTTGAAGATTGGAGGAGAACCAAACAGGATATGGAGATGAATAACAGGAAGGTGAAAGTACATATTCGAGATGGTGAGTTTGTTGAGACTAAATGGATGGACTTGAAAGTTGGGGATGTAGTTAAAGTGGAGAAGGATGAATTCTTCCCTGCTGATCTCATTTTACTTTCATCGAGTTACGAGGAAGCGATTTGCTACGTCGAGACAATGAACCTTGATGGAGAAACAAATTTGAAGCTGAAAAACGCTTTAGAAGCAAGCTCAAACTTACACGAGGATTCGAGCTTTCAGAATTTCAAGGCTATAATAAAATGTGAAGACCCCAATGCAAATTTGTATTCCTTTGTGGGTAGTATGGAGCTTGAAGAGCAGCAACATCCACTCAGCCCTCAACAGCTTCTTCTTCGAGACTCGAAGCTTCGAAACACGGATTTTATATACGGGGTGGTGATTTTCACAGGTCATGATACAAAGGTTATTCAGAACTCAACAGATCCTCCTTCCAAGAGAAGCAAGATTGAGAAGAGGATGGATAAGGTTGTGTTCTTTCTGTTTGCTGTCTTGGTTTTGATATCAGTTGCTGGGTCAATTTTCTTCGGTGTTACGACTAGAGACGATATAGAAAACGGAAGAACTACGAGATGGTACCTTCGGCCAGACGATACCACAATATATTACAACCCCAAAAATGCTCCAGCTGCAGCAATATTGCAGTTTTTGACTGCTCTTATGCTTTTTAGCTATTTGATTCCCATATCATTGTATGTGTCCATTGAAATTGTCAAAGTTCTGCAGAGTGCCTTCATCAACCAAGATGAACATATGTACCATGAGGAAACTGATAAACCAGCTCATGCCCGTACCTCAAATTTGAATGAAGAGCTTGGCCAAGTTGACACCATTCTTTCCGATAAAACGGGGACATTGACTTGCAATTCGATGGAGTTTATCAAGTGTTCGGTGGGCGGGACTGCTTATGGGCGAGGAATTACAGAAGTTGAGCGAGCTTTTGCTAGAAGAAAGGAGTCAACTTTACCTCAAAACATAGGGGCCAACAATGCACGTCTTAGCAGCGAAAAACCGTTCATTAAGGGGTTCAATTTCAAGGATGAAAGAATAATGGATGGTAATTGGGTGAAGGAGCCTCGAGCCAATATAATCCAGAAGTTCCTACAGCTTCTGGCCGTCTGCCATACTGCATTGCCAGAAATTGATGAGGAAACTGGAAAAATTTCTTATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAATTCGGTTTCGAGTTCTATGAAAGGACTCAGACAAGCATTTCATTGCGGGAGTTCGATCCGACCTCGGCCAAAATCGTTGAAAGATCATATCAACTTCTGGATATTTTGGAGTTTAATAGCACAAGAAAGCGGATGTCTGTGATTGTAAGGGATGCAAAGGGACAGCTACTACTACTTTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTTGCAAAGAATGGAAGTGAGTTTGAAGAACAGACAAAGGTGCACATCAATGAGTACGCCGATGCTGGTTTAAGAACTTTGGTTCTAGCATATCGTGAGCTGAAAGAGGAGGAATTTAATACATTTCATCAAGAATTCATCAAAGCCAAAAACACAGTGAGCACAGATCGCGACGACATAATCGATCAGTTAACAGAAACCATTGAGAAAGATTTGATTCTTCTTGGTGCTACAGCAGTTGAAGATAAACTTCAAAATGGGGTCCCTGAATGCATCGACAAACTTGCTCAGGCTGGAATCAAAATATGGGTTCTGACTGGTGATAAGATGGAAACAGCCATCAACATTGGTTTACTTAGACAAGGAATGAAGCAAATAATTATCAGCTCAGAGACTCCGGAAGGAAAAGCTTTAGACAAAGTCGAAGATGTTCACAAATCCGCAGCTATCAAGTGTTCTTTTATAATGGAAACTCTTGTGTCGATTCAAAATCAATCTAATGTTCTTGCTGATTTTCAGGCGTTCAAGGCAAGTGTGACTCAACAAATAACTGATGCGAAAGCATTGCTTGTGTCCTCGAGCGAAACCCCAGAAACATTGGCTTTGATAATTGATGGAAAGTCCCTCACCTATGCTTTGGAGGATGATGTGAAGGACCTATTTCTGGAGCTTGCCATTGGTTGTGCTTCAGTTATATGCTGCAGATCATCTCCTAAACAGAAAGCACAAGTTACCCAATTGGTTAAGGTTAAAACAGGCAGCACAACTCTAGCAGTTGGTGATGGTGCAAACGATGTTGGAATGCTCCAAGAAGCGGATATCGGGATCGGTATTAGCGGTGTAGAAGGGATGCAGGCAGTCATGTCAAGTGACATTGCAATAGCACAGTTTCGATACTTGGAGCGGCTGCTCCTTGTGCATGGACATTGGTGTTACAGGAGGATCTCTTCCATGATTAACTTGCAACATTACAGTCTCAACATCATTTTAAGCTTGAAAATCGTTGATATATGTCGAACTGACCGCATTTTCTATATATGCTATTTCTTCTACAAGAACATTGTTTTTGGGTTCACTCTCTTCTTCTTTGAGATGTATGCATCATTCTCCGGCCAAGCTGTATACAACGACTGGTTCCTTTCGCTGTATAACGTCTTCTTTACTTCACTCCCTGTGATTGCATTGGGAGTATTCGACCAGGACGTCTCATCCCGGTACTGTCTCAAGGTAAGTTCAACGTCGCTATGTCTTATCGATCCAATCTTTTGCCTTATTGATCCAATCTTTTGCCTACCGTAA | 3165 | 41.64 | MGGGRRRKKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRVVYCNDPDSFEASLLNYGGNYVKTSKYTIASFFPKSLFEQFRRVANLYFLLCALLSFSPLSPYSPVSNVLPLVVVIGVTMGKEALEDWRRTKQDMEMNNRKVKVHIRDGEFVETKWMDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKNALEASSNLHEDSSFQNFKAIIKCEDPNANLYSFVGSMELEEQQHPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDKVVFFLFAVLVLISVAGSIFFGVTTRDDIENGRTTRWYLRPDDTTIYYNPKNAPAAAILQFLTALMLFSYLIPISLYVSIEIVKVLQSAFINQDEHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERAFARRKESTLPQNIGANNARLSSEKPFIKGFNFKDERIMDGNWVKEPRANIIQKFLQLLAVCHTALPEIDEETGKISYEAESPDEAAFVIAAREFGFEFYERTQTSISLREFDPTSAKIVERSYQLLDILEFNSTRKRMSVIVRDAKGQLLLLCKGADSVMFERLAKNGSEFEEQTKVHINEYADAGLRTLVLAYRELKEEEFNTFHQEFIKAKNTVSTDRDDIIDQLTETIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGLLRQGMKQIIISSETPEGKALDKVEDVHKSAAIKCSFIMETLVSIQNQSNVLADFQAFKASVTQQITDAKALLVSSSETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAQVTQLVKVKTGSTTLAVGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMINLQHYSLNIILSLKIVDICRTDRIFYICYFFYKNIVFGFTLFFFEMYASFSGQAVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKVSSTSLCLIDPIFCLIDPIFCLP | 1054 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1273764 | 1280256 | - | Lsi02G001550.1 | Lsi02g00155 | 654897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g00155 | 1054 | SUPERFAMILY | HAD-like | 420 | 936 | IPR036412 | - | |
Lsi02g00155 | 1054 | SFLD | C1.7: P-type atpase like | 407 | 932 | - | - | |
Lsi02g00155 | 1054 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 108 | 223 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi02g00155 | 1054 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 847 | 950 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi02g00155 | 1054 | Gene3D | - | 117 | 287 | - | - | |
Lsi02g00155 | 1054 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 496 | 699 | IPR023299 | GO:0000166 | |
Lsi02g00155 | 1054 | CDD | P-type_ATPase_APLT_Dnf-like | 58 | 1032 | - | - | |
Lsi02g00155 | 1054 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 4 | 952 | - | - | |
Lsi02g00155 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 425 | 439 | - | - | |
Lsi02g00155 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 881 | 900 | - | - | |
Lsi02g00155 | 1054 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 967 | 1033 | - | - | |
Lsi02g00155 | 1054 | Gene3D | - | 543 | 697 | IPR023299 | GO:0000166 | |
Lsi02g00155 | 1054 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 967 | 1033 | - | - | |
Lsi02g00155 | 1054 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 4 | 952 | - | - | |
Lsi02g00155 | 1054 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 967 | 1032 | IPR032630 | - | |
Lsi02g00155 | 1054 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 909 | 946 | IPR032630 | - | |
Lsi02g00155 | 1054 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 48 | 1030 | IPR023298 | - | |
Lsi02g00155 | 1054 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 56 | 954 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Lsi02g00155 | 1054 | SFLD | p-type atpase | 407 | 932 | IPR044492 | - | |
Lsi02g00155 | 1054 | Pfam | Cation transport ATPase (P-type) | 532 | 623 | - | - | |
Lsi02g00155 | 1054 | Pfam | E1-E2 ATPase | 136 | 377 | - | - | |
Lsi02g00155 | 1054 | Gene3D | - | 698 | 921 | IPR023214 | - | |
Lsi02g00155 | 1054 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 427 | 433 | IPR018303 | - | |
Lsi02g00155 | 1054 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 107 | IPR032631 | - | |
Lsi02g00155 | 1054 | SUPERFAMILY | Calcium ATPase, transduction domain A | 143 | 284 | IPR008250 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g00155 | Lsi-Chr2:1273764 | Lsi09g01091 | Lsi-Chr9:17328856 | 0 | dispersed | |
Lsi04g00494 | Lsi-Chr4:4565326 | Lsi02g00155 | Lsi-Chr2:1273764 | 1.18E-63 | transposed | |
Lsi08g00624 | Lsi-Chr8:14590144 | Lsi02g00155 | Lsi-Chr2:1273764 | 0 | transposed | |
Lsi11g01706 | Lsi-Chr11:25213447 | Lsi02g00155 | Lsi-Chr2:1273764 | 1.27E-19 | transposed | |
Lsi02g00155 | Lsi-Chr2:1273764 | Lsi04g00308 | Lsi-Chr4:3125165 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g00155 | K01530 | K14802 | csv:101209427 | 1780.76 |