Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00502 ATGGCAACGACGACCACCAGTATTGGCGGCGATGGTGGCGGCGGTGCTGGGGAGGATAGAGTTATGGCTACCGCTCAGCAGATAGTAAATAGCCTCAATACCCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAACATCACCAGTTTGGTCAACAGTGGGGATTCGAGGAAGGAGGGGGATCGATTTGAAGCTGCTGAGAAGGTGATTCTTCGTTGGGATTCTGGTCATGGAGCTTCTCGGAACTCAATTAATTGGGAGGACTCGCCAGATGAGGCGGCTGAGTATTTAACGGCGGTCGATGATATTATTCAGTGGATCGACGACTTGTCAATTCGTTCGGATTCAGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATCCGGAACACCGTCCCTCTCGATGCTGAGCATCTCTACGGTTCAATTCGTAAGGTTTCCCTCTCTTTCGCTTCACACGACAGCGAAAATTCTGATGAATTTGAGTCGTTTGCCGATGTTGACCGTGGTTCGGGAATCTACCATGAGCGTGGTGTCAGTTTGGGCGATGATTTGCGGGTCGATTTGATTCATCCTGACGCTGTTGTTGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAGAAAGAGTGTGTTAATGTGTATACTGGTGTCCGACGCGATGCTTTAGATGAGTGCTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTTCAGAAAATTGACTGGAAAATCTTGGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTACTTTTGACAGGCGAGAAGCGACTGTGTGACTATATCTTTAGTGAGTCTGATGACTCTGAGGAAGTTTGCTTCAATGAGACTGCAAAAGGGTGCATCAGGCAATTACTGAATTTTGCAGAAGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAATACGTTTTTCCAGACTTGCAGGCTATGGTCACTGATGAATTCGTGATTGAGGAGGCGCGTGGAGTACTTTCTAGGCTGGGAGAGGCCGCCAAAGGTACATTTGCTGAATTTGAGAATGCTGTTCGGAGTGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTTACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTGGATGCACTTTTAGAAGGCGACGATGAGGATTTGCATCATCTAGGGGGTGATGGGGCTGATAATTTGGAGTTAGAAACTATGTCTCCTTTAGCTCGTCGTCTGTTTTCATTGATATCAACACTGGAGACCAATCTAGAGAGAAAATCCAAACTCTATGGTGATGATTCAATACAATATATATTTCTCATGAACAATATACAATATATTGTGCAGAAAGTGAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAGCGCCGTGGCCAGGTTCGCATTTATGCAACAAACTATCTTAGGGCGTCTTGGGGCAAACTATTAGCTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTAAAGGAAAAATTCAAAAGTTTCAATGCTGGCTTTGAAGAACTCTATAGAATTCAGACAGGTTGGAAGGTTCCAGATGCTCAACTACGGGAAGAGCTCCGAATTTCAGTGTCTGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGACATGGAAGTCAGTTAGAGAATACAAGACATCCTGGGAGGTATATAAAGTACACATCTGATGACTTGGAAGGCTATTTATTGGATTTGTTTGAAGGATCATCTTGTGTTATACATCACTTAAGAAGAAAAAGTAGTTCATAG 1977 44.51 MATTTTSIGGDGGGGAGEDRVMATAQQIVNSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSRKEGDRFEAAEKVILRWDSGHGASRNSINWEDSPDEAAEYLTAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRNTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFADVDRGSGIYHERGVSLGDDLRVDLIHPDAVVDLKEIADRMIRSGYEKECVNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSESDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVFPDLQAMVTDEFVIEEARGVLSRLGEAAKGTFAEFENAVRSETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLHHLGGDGADNLELETMSPLARRLFSLISTLETNLERKSKLYGDDSIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLAFLKEEGTGGSSNSALKLATLKEKFKSFNAGFEELYRIQTGWKVPDAQLREELRISVSAKALPAYRAFLGRHGSQLENTRHPGRYIKYTSDDLEGYLLDLFEGSSCVIHHLRRKSSS 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4257529 4259505 - Lsi02G005020.1 Lsi02g00502 655244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00502 658 Gene3D Exocyst complex component Exo70 88 648 - -
Lsi02g00502 658 Pfam Exo70 exocyst complex subunit 280 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lsi02g00502 658 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 656 - -
Lsi02g00502 658 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 656 IPR004140 GO:0000145|GO:0006887
Lsi02g00502 658 SUPERFAMILY Cullin repeat-like 71 643 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00502 Lsi-Chr2:4257529 Lsi06g00498 Lsi-Chr6:5933403 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00502 K07195 - csv:101212753 1201.42