Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00573 ATGGATCATTTTGGTGCATATATATCGCCAGCCCACCCTCTCTCTGTTAAGAGTCCCTCTGGTTTGTATACTTTGTCCGAGCTGACATGCAAGAGAACTCATACTACCATGGCCTCAAAATCCACCCACCTTCTACTAATTCTTCTCTTCATTCTCTCATTCATCAATTCCTCCCTCCAAGATTACTACACTCCCAGCAAGAAGAATATGAACATAATCGACTCTTGCTGGCGTCAAACATCCAATTGGGCCAAAAACCGCCAAGCCTTAGCCAACTGCGCGGTTGGCTATGGCAAGGACGCAATCGGAGGCAAATTTGGCTCCATTTACGTGGTGACCGACCCATCCGACAACCCTTCAAACCCGAAATACGGAACGTTACGTTACGGCGTGATCCAAGAGAAGCCATTGTGGATTGTGTTTGGTAAGGACATGGTTATTGTGTTGAAGAATGAGCTAATGGTAAATAGTTACAAGACGATTGATGGACGTGGGGCTAAAGTGGAAATTGCTTATGGGCCTTGTATTACGGTGCAAGGAGTTAGCCATGTAATTATACATGGAATTAGTATTCATGATTGTAAGCCTGGCAAAGCTGGGGTTGTTAGAGATAGTGTGTCGCATGTTGGAAAACGGCAAGGATCTGATGGTGATGCTATTGCTGTGTTTGGTTCTTCACATGTTTGGATTGATCATTGTTTTTTAGCTCGATGTACTGATGGTCTTGTTGATGTTATTCATGCTTCCACTGCTGTTACTATCTCAAATAACTACTTCTCCCAACATGATAAGGTGATGTTGCTTGGACATAATGATGGGTTCACTGATGATAAAATTATGAGAGTCACCATTGTTTTCAACCGCTTTGGTGCTGGCCTTATTGAGAGAATGCCAAGGGTTAGGTTTGGTTATGCCCATGTAGCCAACAATAGATACGACGAATGGAAAATGTATGCCATTGGTGGAAGTGCAAACCCCACAATCTTCAGTGAAGGAAACTACTTTGTAGCTCCACAAAATTCTAATGCCAAGCAGGTTACAAAGAGGGAGGTTAATAATGGGTGGAAGAACTGGAAATGGAGATCCTCTAGAGATGTGTTCTTAAATGGTGCTTATTTTGTGCCATCGGGATGGGGAAGTTGCAGCCCAATTTACACAAAACCTCAGTCTTTTCCAGTGGCTCCTGGCTCCATGGTTCCTGCTTTGACTGAAAATGCAGGCCCACTTCCCTGTTTTATCGGCAAATCTTGCTAA 1254 43.62 MDHFGAYISPAHPLSVKSPSGLYTLSELTCKRTHTTMASKSTHLLLILLFILSFINSSLQDYYTPSKKNMNIIDSCWRQTSNWAKNRQALANCAVGYGKDAIGGKFGSIYVVTDPSDNPSNPKYGTLRYGVIQEKPLWIVFGKDMVIVLKNELMVNSYKTIDGRGAKVEIAYGPCITVQGVSHVIIHGISIHDCKPGKAGVVRDSVSHVGKRQGSDGDAIAVFGSSHVWIDHCFLARCTDGLVDVIHASTAVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSNAKQVTKREVNNGWKNWKWRSSRDVFLNGAYFVPSGWGSCSPIYTKPQSFPVAPGSMVPALTENAGPLPCFIGKSC 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5129704 5137554 + Lsi02G005730.1 Lsi02g00573 655315

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00573 417 SMART amb_all 144 341 IPR002022 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 93 110 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 388 411 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 296 315 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 358 382 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 116 141 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 152 168 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 216 237 IPR018082 -
Lsi02g00573 417 PRINTS Pollen allergen Amb family signature 318 337 IPR018082 -
Lsi02g00573 417 PANTHER PECTATE LYASE 18-RELATED 55 415 IPR045032 GO:0030570
Lsi02g00573 417 SUPERFAMILY Pectin lyase-like 70 408 IPR011050 -
Lsi02g00573 417 PANTHER PECTATE LYASE 16-RELATED 55 415 - -
Lsi02g00573 417 Pfam Pectate lyase 150 335 IPR002022 -
Lsi02g00573 417 Gene3D - 70 410 IPR012334 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00573 K01728 pel; pectate lyase [EC:4.2.2.2] - csv:101211379 737.643
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00573 Lsi-Chr2:5129704 Lsi02g00456 Lsi-Chr2:3822873 2.76E-148 dispersed
Lsi02g00043 Lsi-Chr2:427990 Lsi02g00573 Lsi-Chr2:5129704 8.17E-107 transposed
Lsi01g00449 Lsi-Chr1:3750366 Lsi02g00573 Lsi-Chr2:5129704 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi02g00456 . 31 411 Polysaccharide Lyase AT4G24780 83.0 5.2e-190 660.6
Lsi02g01614 . 24 414 Polysaccharide Lyase AT4G24780 74.4 2.8e-183 638.3
Lsi08g01628 . 8 407 Polysaccharide Lyase AT4G24780 75.8 3.4e-181 631.3
Lsi09g01161 CCT,ECH 159 539 Polysaccharide Lyase AT4G24780 72.3 1.7e-172 602.4
Lsi05g01813 CCT,ECH 177 561 Polysaccharide Lyase AT4G24780 71.7 1.7e-169 592.4
Lsi05g01093 . 52 413 Polysaccharide Lyase AT4G24780 66.2 1.3e-153 539.7
Lsi04g00102 . 33 411 Polysaccharide Lyase AT4G24780 63.9 6.2e-151 530.8
Lsi08g00688 . 12 364 Polysaccharide Lyase AT4G24780 62.9 1.2e-138 490.0
Lsi02g00312 . 54 439 Polysaccharide Lyase AT4G24780 58.9 2.4e-134 475.7
Lsi08g00746 . 45 434 Polysaccharide Lyase AT4G24780 55.1 9.7e-128 453.8
Lsi04g00455 . 930 1317 Polysaccharide Lyase AT4G24780 56.7 2.2e-127 452.6
Lsi03g01460 . 51 441 Polysaccharide Lyase AT4G24780 53.7 1.3e-124 443.4
Lsi02g00573 . 71 417 Polysaccharide Lyase AT4G24780 56.6 2.5e-115 412.5
Lsi01g00449 . 33 348 Polysaccharide Lyase AT4G24780 51.4 7.7e-101 364.4
Lsi01g01298 . 41 291 Polysaccharide Lyase AT4G24780 63.3 8.5e-100 360.9
Lsi01g01390 . 1 379 Polysaccharide Lyase AT3G09540 59.1 2.0e-127 452.6
Lsi02g00573 . 45 417 Polysaccharide Lyase AT1G11920 70.4 6.3e-161 563.9
Lsi01g00449 . 8 348 Polysaccharide Lyase AT1G11920 63.6 6.1e-140 494.2
Lsi02g00456 . 63 411 Polysaccharide Lyase AT1G11920 59.7 3.0e-123 438.7
Lsi02g01614 . 66 414 Polysaccharide Lyase AT1G11920 59.1 6.8e-123 437.6
Lsi08g01628 . 59 407 Polysaccharide Lyase AT1G11920 59.1 3.4e-122 435.3
Lsi09g01161 CCT,ECH 191 539 Polysaccharide Lyase AT1G11920 58.9 9.1e-120 427.2
Lsi04g00102 . 60 411 Polysaccharide Lyase AT1G11920 57.8 2.9e-118 422.2
Lsi05g01813 CCT,ECH 193 561 Polysaccharide Lyase AT1G11920 55.4 2.9e-118 422.2
Lsi08g00688 . 17 355 Polysaccharide Lyase AT1G11920 58.2 1.5e-117 419.9
Lsi05g01093 . 84 413 Polysaccharide Lyase AT1G11920 56.0 2.8e-108 389.0
Lsi02g00312 . 84 439 Polysaccharide Lyase AT1G11920 53.6 6.1e-108 387.9
Lsi03g01460 . 84 441 Polysaccharide Lyase AT1G11920 52.8 8.9e-107 384.0
Lsi08g00746 . 75 434 Polysaccharide Lyase AT1G11920 53.6 2.0e-106 382.9
Lsi04g00455 . 960 1317 Polysaccharide Lyase AT1G11920 52.8 5.7e-106 381.3
Lsi01g01298 . 79 291 Polysaccharide Lyase AT1G11920 61.0 3.4e-74 275.8
Lsi02g00312 . 21 439 Polysaccharide Lyase AT1G14420 59.1 1.7e-157 552.7
Lsi03g01460 . 9 441 Polysaccharide Lyase AT1G14420 57.9 1.5e-156 549.7
Lsi04g00455 . 895 1317 Polysaccharide Lyase AT1G14420 59.5 2.8e-155 545.4
Lsi08g00746 . 25 434 Polysaccharide Lyase AT1G14420 61.2 3.5e-150 528.5
Lsi09g01161 CCT,ECH 187 539 Polysaccharide Lyase AT1G14420 56.8 1.3e-125 446.8
Lsi08g01628 . 55 407 Polysaccharide Lyase AT1G14420 55.7 1.2e-123 440.3
Lsi02g01614 . 62 414 Polysaccharide Lyase AT1G14420 55.7 1.6e-123 439.9
Lsi02g00456 . 59 411 Polysaccharide Lyase AT1G14420 54.6 2.0e-121 433.0
Lsi08g00688 . 10 358 Polysaccharide Lyase AT1G14420 56.9 5.8e-121 431.4
Lsi05g01813 CCT,ECH 189 561 Polysaccharide Lyase AT1G14420 53.0 1.9e-119 426.4
Lsi04g00102 . 21 412 Polysaccharide Lyase AT1G14420 51.2 7.1e-119 424.5
Lsi05g01093 . 80 413 Polysaccharide Lyase AT1G14420 52.1 8.7e-109 391.0
Lsi02g00573 . 71 417 Polysaccharide Lyase AT1G14420 52.2 1.4e-106 383.6
Lsi09g01161 CCT,ECH 172 539 Polysaccharide Lyase AT3G07010 82.3 1.5e-186 649.0
Lsi05g01813 CCT,ECH 173 561 Polysaccharide Lyase AT3G07010 78.1 2.0e-183 638.6
Lsi05g01093 . 65 413 Polysaccharide Lyase AT3G07010 78.5 4.9e-174 607.4
Lsi02g01614 . 51 414 Polysaccharide Lyase AT3G07010 73.9 2.8e-169 591.7
Lsi02g00456 . 43 411 Polysaccharide Lyase AT3G07010 73.4 9.0e-168 586.6
Lsi08g01628 . 40 407 Polysaccharide Lyase AT3G07010 72.6 6.4e-166 580.5
Lsi04g00102 . 65 411 Polysaccharide Lyase AT3G07010 66.9 2.8e-145 511.9
Lsi08g00688 . 12 355 Polysaccharide Lyase AT3G07010 65.1 6.1e-140 494.2
Lsi02g00312 . 75 439 Polysaccharide Lyase AT3G07010 59.8 5.5e-133 471.1
Lsi08g00746 . 66 434 Polysaccharide Lyase AT3G07010 60.2 7.9e-132 467.2
Lsi03g01460 . 74 441 Polysaccharide Lyase AT3G07010 58.7 8.8e-131 463.8
Lsi04g00455 . 951 1317 Polysaccharide Lyase AT3G07010 60.5 3.3e-130 461.8
Lsi02g00573 . 71 417 Polysaccharide Lyase AT3G07010 55.7 4.4e-114 408.3
Lsi01g00449 . 26 348 Polysaccharide Lyase AT3G07010 50.7 3.3e-101 365.5
Lsi01g01298 . 52 291 Polysaccharide Lyase AT3G07010 63.3 1.5e-93 340.1
Lsi09g01161 CCT,ECH 155 539 Polysaccharide Lyase AT4G13210 78.8 4.6e-184 641.0
Lsi05g01813 CCT,ECH 174 561 Polysaccharide Lyase AT4G13210 75.6 1.2e-171 599.7
Lsi05g01093 . 2 413 Polysaccharide Lyase AT4G13210 69.0 3.2e-169 591.7
Lsi08g01628 . 27 407 Polysaccharide Lyase AT4G13210 72.8 5.6e-166 580.9
Lsi02g00456 . 30 411 Polysaccharide Lyase AT4G13210 72.6 2.0e-163 572.4
Lsi02g01614 . 36 414 Polysaccharide Lyase AT4G13210 67.1 3.3e-158 555.1
Lsi04g00102 . 30 387 Polysaccharide Lyase AT4G13210 63.1 1.3e-138 490.0
Lsi08g00688 . 8 333 Polysaccharide Lyase AT4G13210 67.8 1.4e-137 486.5
Lsi02g00312 . 56 439 Polysaccharide Lyase AT4G13210 56.9 3.2e-129 458.8
Lsi08g00746 . 66 392 Polysaccharide Lyase AT4G13210 63.0 3.7e-125 445.3
Lsi03g01460 . 75 441 Polysaccharide Lyase AT4G13210 57.2 4.8e-125 444.9
Lsi04g00455 . 947 1317 Polysaccharide Lyase AT4G13210 56.9 5.3e-124 441.4
Lsi02g00573 . 71 417 Polysaccharide Lyase AT4G13210 55.8 4.4e-110 395.2
Lsi01g00449 . 33 348 Polysaccharide Lyase AT4G13210 50.6 2.8e-96 349.4
Lsi01g01298 . 43 291 Polysaccharide Lyase AT4G13210 64.3 2.9e-93 339.3
Lsi09g01161 CCT,ECH 156 539 Polysaccharide Lyase AT4G13710 84.8 1.9e-201 698.7
Lsi05g01813 CCT,ECH 174 561 Polysaccharide Lyase AT4G13710 80.9 5.2e-191 664.1
Lsi05g01093 . 31 413 Polysaccharide Lyase AT4G13710 72.8 2.0e-174 609.0
Lsi08g01628 . 29 407 Polysaccharide Lyase AT4G13710 72.6 1.2e-171 599.7
Lsi02g01614 . 39 414 Polysaccharide Lyase AT4G13710 71.2 1.7e-170 595.9
Lsi02g00456 . 29 411 Polysaccharide Lyase AT4G13710 71.3 3.3e-169 591.7
Lsi04g00102 . 34 412 Polysaccharide Lyase AT4G13710 64.9 6.2e-152 534.3
Lsi08g00688 . 12 358 Polysaccharide Lyase AT4G13710 65.7 4.3e-145 511.5
Lsi08g00746 . 40 434 Polysaccharide Lyase AT4G13710 58.7 2.2e-136 482.6
Lsi02g00312 . 88 439 Polysaccharide Lyase AT4G13710 61.5 9.0e-135 477.2
Lsi03g01460 . 52 441 Polysaccharide Lyase AT4G13710 58.2 1.2e-134 476.9
Lsi04g00455 . 941 1317 Polysaccharide Lyase AT4G13710 59.9 1.7e-133 473.0
Lsi02g00573 . 71 417 Polysaccharide Lyase AT4G13710 56.9 5.0e-117 418.3
Lsi01g00449 . 33 348 Polysaccharide Lyase AT4G13710 52.9 5.7e-105 378.3
Lsi01g01298 . 43 291 Polysaccharide Lyase AT4G13710 65.5 1.8e-98 356.7
Lsi02g00573 . 44 417 Polysaccharide Lyase AT4G22080 67.0 6.2e-156 547.4
Lsi01g00449 . 8 348 Polysaccharide Lyase AT4G22080 60.0 5.0e-129 458.0
Lsi08g01628 . 57 407 Polysaccharide Lyase AT4G22080 57.4 9.4e-120 427.2
Lsi02g01614 . 66 414 Polysaccharide Lyase AT4G22080 57.1 6.7e-118 421.0
Lsi02g00456 . 63 411 Polysaccharide Lyase AT4G22080 57.1 2.0e-117 419.5
Lsi09g01161 CCT,ECH 191 539 Polysaccharide Lyase AT4G22080 56.3 2.4e-115 412.5
Lsi08g00688 . 17 361 Polysaccharide Lyase AT4G22080 57.5 7.7e-114 407.5
Lsi04g00102 . 71 415 Polysaccharide Lyase AT4G22080 56.6 1.4e-112 403.3
Lsi05g01813 CCT,ECH 193 561 Polysaccharide Lyase AT4G22080 53.5 2.5e-112 402.5
Lsi02g00312 . 92 439 Polysaccharide Lyase AT4G22080 54.6 2.8e-108 389.0
Lsi03g01460 . 92 441 Polysaccharide Lyase AT4G22080 53.1 7.7e-106 380.9
Lsi05g01093 . 84 413 Polysaccharide Lyase AT4G22080 53.2 5.0e-105 378.3
Lsi04g00455 . 963 1317 Polysaccharide Lyase AT4G22080 53.5 2.5e-104 375.9
Lsi08g00746 . 83 434 Polysaccharide Lyase AT4G22080 52.6 3.6e-103 372.1
Lsi01g01298 . 79 291 Polysaccharide Lyase AT4G22080 59.2 6.6e-73 271.6
Lsi02g00573 . 44 417 Polysaccharide Lyase AT4G22090 66.2 8.4e-153 537.0
Lsi01g00449 . 8 348 Polysaccharide Lyase AT4G22090 59.5 7.2e-128 454.1
Lsi08g01628 . 57 407 Polysaccharide Lyase AT4G22090 57.1 1.2e-119 426.8
Lsi02g00456 . 63 411 Polysaccharide Lyase AT4G22090 57.7 1.2e-119 426.8
Lsi02g01614 . 66 414 Polysaccharide Lyase AT4G22090 56.3 1.4e-118 423.3
Lsi09g01161 CCT,ECH 191 539 Polysaccharide Lyase AT4G22090 55.4 2.4e-115 412.5
Lsi05g01813 CCT,ECH 193 561 Polysaccharide Lyase AT4G22090 53.0 6.5e-113 404.4
Lsi08g00688 . 17 361 Polysaccharide Lyase AT4G22090 56.6 2.5e-112 402.5
Lsi04g00102 . 71 415 Polysaccharide Lyase AT4G22090 55.2 1.4e-110 396.7
Lsi02g00312 . 87 439 Polysaccharide Lyase AT4G22090 54.2 8.2e-108 387.5
Lsi05g01093 . 84 413 Polysaccharide Lyase AT4G22090 52.3 1.3e-105 380.2
Lsi04g00455 . 963 1317 Polysaccharide Lyase AT4G22090 53.5 1.1e-104 377.1
Lsi03g01460 . 87 441 Polysaccharide Lyase AT4G22090 51.5 3.2e-104 375.6
Lsi08g00746 . 83 434 Polysaccharide Lyase AT4G22090 51.7 2.0e-101 366.3
Lsi01g01298 . 79 291 Polysaccharide Lyase AT4G22090 58.2 5.0e-73 271.9
Lsi04g00102 . 20 415 Polysaccharide Lyase AT3G54920 66.6 9.6e-162 567.0
Lsi08g00688 . 12 364 Polysaccharide Lyase AT3G54920 71.8 1.3e-155 546.6
Lsi09g01161 CCT,ECH 157 529 Polysaccharide Lyase AT3G54920 59.3 1.4e-136 483.4
Lsi02g00456 . 5 403 Polysaccharide Lyase AT3G54920 57.7 3.8e-134 475.3
Lsi08g01628 . 30 399 Polysaccharide Lyase AT3G54920 57.9 8.8e-131 464.2
Lsi05g01813 CCT,ECH 169 553 Polysaccharide Lyase AT3G54920 56.0 8.8e-131 464.2
Lsi02g01614 . 18 406 Polysaccharide Lyase AT3G54920 55.4 2.0e-130 463.0
Lsi02g00312 . 88 429 Polysaccharide Lyase AT3G54920 61.7 1.5e-122 436.8
Lsi08g00746 . 79 426 Polysaccharide Lyase AT3G54920 59.4 1.5e-117 420.2
Lsi05g01093 . 50 405 Polysaccharide Lyase AT3G54920 53.8 3.6e-116 415.6
Lsi04g00455 . 964 1309 Polysaccharide Lyase AT3G54920 58.0 5.4e-112 401.7
Lsi03g01460 . 33 431 Polysaccharide Lyase AT3G54920 50.2 5.5e-109 391.7
Lsi02g00573 . 71 407 Polysaccharide Lyase AT3G54920 55.0 1.2e-106 384.0
Lsi01g01298 . 27 291 Polysaccharide Lyase AT3G54920 64.7 6.1e-100 361.7
Lsi03g01460 . 17 441 Polysaccharide Lyase AT5G15110 60.5 2.6e-164 575.5
Lsi02g00312 . 12 439 Polysaccharide Lyase AT5G15110 54.8 1.7e-152 536.2
Lsi04g00455 . 884 1317 Polysaccharide Lyase AT5G15110 54.6 2.7e-150 528.9
Lsi08g00746 . 10 434 Polysaccharide Lyase AT5G15110 56.2 4.0e-149 525.0
Lsi09g01161 CCT,ECH 164 539 Polysaccharide Lyase AT5G15110 56.9 2.5e-127 452.6
Lsi02g01614 . 43 414 Polysaccharide Lyase AT5G15110 55.5 5.4e-122 434.9
Lsi08g01628 . 55 407 Polysaccharide Lyase AT5G15110 57.5 9.2e-122 434.1
Lsi05g01813 CCT,ECH 189 561 Polysaccharide Lyase AT5G15110 54.9 7.3e-119 424.5
Lsi02g00456 . 59 411 Polysaccharide Lyase AT5G15110 56.9 1.5e-116 416.8
Lsi04g00102 . 67 411 Polysaccharide Lyase AT5G15110 55.6 3.9e-112 402.1
Lsi05g01093 . 80 413 Polysaccharide Lyase AT5G15110 54.9 2.8e-110 396.0
Lsi08g00688 . 13 355 Polysaccharide Lyase AT5G15110 53.0 1.5e-108 390.2
Lsi01g01298 . 75 291 Polysaccharide Lyase AT5G15110 55.8 2.7e-73 273.1
Lsi09g01161 CCT,ECH 155 539 Polysaccharide Lyase AT5G48900 80.5 2.6e-189 658.3
Lsi05g01093 . 48 413 Polysaccharide Lyase AT5G48900 80.0 1.6e-181 632.5
Lsi05g01813 CCT,ECH 174 561 Polysaccharide Lyase AT5G48900 77.1 1.9e-179 625.5
Lsi08g01628 . 27 407 Polysaccharide Lyase AT5G48900 72.4 1.5e-168 589.3
Lsi02g01614 . 14 414 Polysaccharide Lyase AT5G48900 69.3 2.0e-168 589.0
Lsi02g00456 . 30 411 Polysaccharide Lyase AT5G48900 71.5 2.4e-166 582.0
Lsi04g00102 . 30 411 Polysaccharide Lyase AT5G48900 62.2 4.9e-143 504.6
Lsi08g00688 . 12 355 Polysaccharide Lyase AT5G48900 66.0 3.6e-138 488.4
Lsi02g00312 . 34 439 Polysaccharide Lyase AT5G48900 57.5 5.4e-134 474.6
Lsi08g00746 . 12 434 Polysaccharide Lyase AT5G48900 54.6 1.2e-128 456.8
Lsi03g01460 . 74 441 Polysaccharide Lyase AT5G48900 59.0 5.8e-128 454.5
Lsi04g00455 . 931 1317 Polysaccharide Lyase AT5G48900 58.4 4.9e-127 451.4
Lsi02g00573 . 71 417 Polysaccharide Lyase AT5G48900 57.7 9.6e-115 410.6
Lsi01g00449 . 26 348 Polysaccharide Lyase AT5G48900 52.4 1.1e-99 360.5
Lsi01g01298 . 42 291 Polysaccharide Lyase AT5G48900 64.0 8.5e-95 344.4
Lsi02g00456 . 8 411 Polysaccharide Lyase AT5G63180 77.3 8.0e-189 656.8
Lsi08g01628 . 23 407 Polysaccharide Lyase AT5G63180 76.7 2.0e-184 642.1
Lsi02g01614 . 30 414 Polysaccharide Lyase AT5G63180 77.1 2.7e-184 641.7
Lsi09g01161 CCT,ECH 159 539 Polysaccharide Lyase AT5G63180 70.5 3.1e-169 591.7
Lsi05g01813 CCT,ECH 173 561 Polysaccharide Lyase AT5G63180 68.8 4.0e-164 574.7
Lsi05g01093 . 52 413 Polysaccharide Lyase AT5G63180 67.6 1.7e-154 542.7
Lsi04g00102 . 34 415 Polysaccharide Lyase AT5G63180 63.3 2.6e-147 518.8
Lsi08g00688 . 12 363 Polysaccharide Lyase AT5G63180 64.4 1.1e-140 496.9
Lsi02g00312 . 66 439 Polysaccharide Lyase AT5G63180 61.3 2.3e-135 479.2
Lsi08g00746 . 46 434 Polysaccharide Lyase AT5G63180 56.0 6.4e-130 461.1
Lsi03g01460 . 52 441 Polysaccharide Lyase AT5G63180 56.0 4.2e-129 458.4
Lsi04g00455 . 931 1317 Polysaccharide Lyase AT5G63180 56.4 8.7e-127 450.7
Lsi02g00573 . 71 417 Polysaccharide Lyase AT5G63180 57.5 9.6e-118 420.6
Lsi01g01298 . 42 291 Polysaccharide Lyase AT5G63180 65.6 2.8e-101 365.9
Lsi01g00449 . 33 348 Polysaccharide Lyase AT5G63180 51.3 6.9e-100 361.3
Lsi02g01614 . 61 414 Polysaccharide Lyase AT5G55720 60.2 1.1e-128 456.8
Lsi02g00456 . 12 411 Polysaccharide Lyase AT5G55720 55.2 8.2e-124 440.7
Lsi09g01161 CCT,ECH 186 539 Polysaccharide Lyase AT5G55720 59.6 5.3e-123 438.0
Lsi08g01628 . 8 407 Polysaccharide Lyase AT5G55720 55.0 7.6e-122 434.1
Lsi05g01813 CCT,ECH 188 561 Polysaccharide Lyase AT5G55720 56.9 7.6e-122 434.1
Lsi08g00688 . 4 356 Polysaccharide Lyase AT5G55720 58.3 1.1e-120 430.3
Lsi04g00102 . 52 411 Polysaccharide Lyase AT5G55720 56.9 1.1e-115 413.7
Lsi02g00573 . 69 417 Polysaccharide Lyase AT5G55720 53.8 2.2e-108 389.4
Lsi08g00746 . 83 434 Polysaccharide Lyase AT5G55720 54.1 8.2e-108 387.5
Lsi04g00455 . 968 1317 Polysaccharide Lyase AT5G55720 54.4 5.3e-107 384.8
Lsi05g01093 . 79 413 Polysaccharide Lyase AT5G55720 54.2 2.6e-106 382.5
Lsi02g00312 . 92 439 Polysaccharide Lyase AT5G55720 55.1 1.3e-105 380.2
Lsi03g01460 . 92 441 Polysaccharide Lyase AT5G55720 52.1 6.5e-105 377.9
Lsi01g01298 . 58 292 Polysaccharide Lyase AT5G55720 56.8 4.5e-74 275.4
Lsi09g01161 CCT,ECH 155 539 Polysaccharide Lyase AT3G24230 75.3 5.2e-175 610.9
Lsi05g01813 CCT,ECH 174 561 Polysaccharide Lyase AT3G24230 73.5 1.2e-166 583.2
Lsi08g01628 . 27 407 Polysaccharide Lyase AT3G24230 67.3 8.4e-157 550.4
Lsi02g00456 . 30 411 Polysaccharide Lyase AT3G24230 67.4 1.3e-154 543.1
Lsi02g01614 . 39 414 Polysaccharide Lyase AT3G24230 66.5 2.3e-154 542.3
Lsi05g01093 . 34 413 Polysaccharide Lyase AT3G24230 66.6 3.3e-153 538.5
Lsi04g00102 . 30 415 Polysaccharide Lyase AT3G24230 60.6 3.6e-139 491.9
Lsi08g00688 . 12 355 Polysaccharide Lyase AT3G24230 64.5 2.8e-136 482.3
Lsi08g00746 . 79 434 Polysaccharide Lyase AT3G24230 61.5 1.4e-127 453.4
Lsi02g00312 . 56 439 Polysaccharide Lyase AT3G24230 57.0 8.5e-125 444.1
Lsi03g01460 . 52 441 Polysaccharide Lyase AT3G24230 56.2 1.6e-123 439.9
Lsi04g00455 . 952 1317 Polysaccharide Lyase AT3G24230 59.8 2.6e-121 432.6
Lsi02g00573 . 69 417 Polysaccharide Lyase AT3G24230 59.1 2.9e-117 419.1
Lsi01g00449 . 33 348 Polysaccharide Lyase AT3G24230 50.9 1.2e-97 354.0
Lsi01g01298 . 43 291 Polysaccharide Lyase AT3G24230 61.4 1.4e-87 320.5
Lsi09g01161 CCT,ECH 155 539 Polysaccharide Lyase AT1G04680 78.7 2.6e-184 641.7
Lsi05g01813 CCT,ECH 174 561 Polysaccharide Lyase AT1G04680 77.1 3.0e-172 601.7
Lsi05g01093 . 37 413 Polysaccharide Lyase AT1G04680 68.4 1.2e-157 553.1
Lsi02g00456 . 30 411 Polysaccharide Lyase AT1G04680 70.7 1.8e-156 549.3
Lsi08g01628 . 27 407 Polysaccharide Lyase AT1G04680 66.5 2.7e-152 535.4
Lsi02g01614 . 41 414 Polysaccharide Lyase AT1G04680 63.9 3.6e-149 525.0
Lsi04g00102 . 30 415 Polysaccharide Lyase AT1G04680 57.8 3.3e-134 475.3
Lsi08g00688 . 12 368 Polysaccharide Lyase AT1G04680 58.0 7.3e-126 447.6
Lsi02g00312 . 75 439 Polysaccharide Lyase AT1G04680 55.5 1.0e-119 427.2
Lsi08g00746 . 12 434 Polysaccharide Lyase AT1G04680 51.5 8.7e-119 424.1
Lsi03g01460 . 74 441 Polysaccharide Lyase AT1G04680 53.8 2.0e-115 412.9
Lsi04g00455 . 931 1317 Polysaccharide Lyase AT1G04680 53.7 2.0e-115 412.9
Lsi02g00573 . 71 417 Polysaccharide Lyase AT1G04680 53.4 3.5e-104 375.6
Lsi01g01298 . 43 291 Polysaccharide Lyase AT1G04680 57.8 4.1e-84 308.9
Lsi02g00312 . 18 439 Polysaccharide Lyase AT2G02720 57.7 6.9e-151 530.8
Lsi03g01460 . 9 441 Polysaccharide Lyase AT2G02720 57.0 5.9e-150 527.7
Lsi04g00455 . 893 1317 Polysaccharide Lyase AT2G02720 56.8 4.8e-144 508.1
Lsi08g00746 . 25 434 Polysaccharide Lyase AT2G02720 59.3 6.3e-144 507.7
Lsi08g01628 . 45 407 Polysaccharide Lyase AT2G02720 53.9 1.3e-120 430.3
Lsi02g01614 . 66 414 Polysaccharide Lyase AT2G02720 55.5 3.1e-119 425.6
Lsi09g01161 CCT,ECH 191 539 Polysaccharide Lyase AT2G02720 54.6 7.8e-118 421.0
Lsi02g00456 . 63 411 Polysaccharide Lyase AT2G02720 54.9 1.7e-117 419.9
Lsi05g01813 CCT,ECH 193 561 Polysaccharide Lyase AT2G02720 50.4 2.7e-110 396.0
Lsi04g00102 . 71 412 Polysaccharide Lyase AT2G02720 53.2 2.5e-108 389.4
Lsi08g00688 . 17 358 Polysaccharide Lyase AT2G02720 53.4 7.3e-108 387.9
Lsi02g00573 . 68 417 Polysaccharide Lyase AT2G02720 51.5 5.8e-105 378.3
Lsi05g01093 . 84 413 Polysaccharide Lyase AT2G02720 50.4 3.2e-103 372.5
Lsi03g01460 . 14 441 Polysaccharide Lyase AT3G01270 59.0 1.0e-160 563.5
Lsi08g00746 . 9 434 Polysaccharide Lyase AT3G01270 56.6 1.2e-150 530.0
Lsi02g00312 . 12 439 Polysaccharide Lyase AT3G01270 56.0 2.8e-150 528.9
Lsi04g00455 . 896 1317 Polysaccharide Lyase AT3G01270 56.2 1.8e-149 526.2
Lsi09g01161 CCT,ECH 187 539 Polysaccharide Lyase AT3G01270 59.7 1.3e-123 440.3
Lsi02g01614 . 62 414 Polysaccharide Lyase AT3G01270 58.3 2.1e-121 433.0
Lsi08g01628 . 55 407 Polysaccharide Lyase AT3G01270 57.5 7.8e-121 431.0
Lsi05g01813 CCT,ECH 189 561 Polysaccharide Lyase AT3G01270 55.5 8.1e-118 421.0
Lsi02g00456 . 59 411 Polysaccharide Lyase AT3G01270 57.5 1.2e-116 417.2
Lsi04g00102 . 64 411 Polysaccharide Lyase AT3G01270 56.0 4.6e-113 405.2
Lsi05g01093 . 80 413 Polysaccharide Lyase AT3G01270 55.2 3.6e-110 395.6
Lsi08g00688 . 13 355 Polysaccharide Lyase AT3G01270 54.5 4.5e-108 388.7
Lsi01g01298 . 75 291 Polysaccharide Lyase AT3G01270 56.7 9.4e-74 274.6
Lsi01g01390 . 87 377 Polysaccharide Lyase AT3G55140 68.7 1.6e-119 426.0
Lsi04g00102 . 32 412 Polysaccharide Lyase AT3G53190 71.4 1.6e-169 592.8
Lsi08g00688 . 10 358 Polysaccharide Lyase AT3G53190 76.5 4.8e-166 581.3
Lsi09g01161 CCT,ECH 161 531 Polysaccharide Lyase AT3G53190 65.9 3.3e-151 531.9
Lsi08g01628 . 26 399 Polysaccharide Lyase AT3G53190 63.0 2.0e-148 522.7
Lsi02g00456 . 32 403 Polysaccharide Lyase AT3G53190 62.8 1.3e-147 520.0
Lsi02g01614 . 36 406 Polysaccharide Lyase AT3G53190 61.3 6.0e-145 511.1
Lsi05g01813 CCT,ECH 183 553 Polysaccharide Lyase AT3G53190 64.2 1.3e-144 510.0
Lsi05g01093 . 54 405 Polysaccharide Lyase AT3G53190 60.6 6.3e-134 474.6
Lsi01g01298 . 40 292 Polysaccharide Lyase AT3G53190 85.0 5.9e-132 468.0
Lsi02g00312 . 54 431 Polysaccharide Lyase AT3G53190 57.3 1.9e-130 463.0
Lsi08g00746 . 44 426 Polysaccharide Lyase AT3G53190 55.6 1.4e-128 456.8
Lsi04g00455 . 930 1309 Polysaccharide Lyase AT3G53190 56.1 7.4e-127 451.1
Lsi03g01460 . 50 433 Polysaccharide Lyase AT3G53190 52.9 2.6e-124 442.6
Lsi02g00573 . 71 409 Polysaccharide Lyase AT3G53190 55.6 7.2e-106 381.3
Lsi02g00573 . 64 417 Polysaccharide Lyase AT1G30350 65.6 4.3e-135 478.0
Lsi01g00449 . 8 348 Polysaccharide Lyase AT1G30350 54.4 5.1e-112 401.4
Lsi02g01614 . 66 414 Polysaccharide Lyase AT1G30350 55.1 5.3e-109 391.3
Lsi08g01628 . 59 407 Polysaccharide Lyase AT1G30350 54.9 4.5e-108 388.3
Lsi02g00456 . 63 411 Polysaccharide Lyase AT1G30350 55.4 5.9e-108 387.9
Lsi09g01161 CCT,ECH 191 539 Polysaccharide Lyase AT1G30350 53.3 6.1e-105 377.9
Lsi08g00688 . 17 355 Polysaccharide Lyase AT1G30350 52.2 9.1e-101 364.0
Lsi04g00102 . 71 411 Polysaccharide Lyase AT1G30350 51.9 1.0e-99 360.5
Lsi01g01298 . 79 291 Polysaccharide Lyase AT1G30350 53.5 4.7e-65 245.4
Lsi02g00043 . 63 315 Polysaccharide Lyase AT5G09280 72.2 5.8e-114 407.5
Lsi02g00573 . 104 349 Polysaccharide Lyase AT5G09280 52.2 2.9e-65 245.7
Lsi02g00456 . 102 341 Polysaccharide Lyase AT5G09280 50.6 6.5e-65 244.6
Lsi01g00449 . 66 277 Polysaccharide Lyase AT5G09280 50.2 1.5e-56 216.9
Lsi08g01009 . 13 628 Polysaccharide Lyase AT4G38030 51.7 1.7e-198 689.5
Lsi04g02289 . 78 662 Polysaccharide Lyase AT4G38030 50.4 5.5e-181 631.3
Lsi04g02289 . 49 662 Polysaccharide Lyase AT1G09880 56.5 4.0e-224 774.6
Lsi08g01009 . 6 628 Polysaccharide Lyase AT1G09880 57.0 8.7e-219 756.9
Lsi04g02290 . 155 631 Polysaccharide Lyase AT1G09880 51.3 6.5e-166 581.3
Lsi08g01009 . 6 628 Polysaccharide Lyase AT1G09890 64.3 3.7e-251 864.4
Lsi04g02289 . 71 662 Polysaccharide Lyase AT1G09890 57.6 4.8e-211 731.1
Lsi04g02290 . 154 631 Polysaccharide Lyase AT1G09890 58.0 5.2e-189 657.9
Lsi08g01009 . 1 629 Polysaccharide Lyase AT1G09910 61.0 5.1e-245 844.0
Lsi04g02289 . 73 662 Polysaccharide Lyase AT1G09910 58.0 2.7e-222 768.5
Lsi04g02290 . 154 633 Polysaccharide Lyase AT1G09910 59.1 3.3e-207 718.4
Lsi08g01009 . 2 628 Polysaccharide Lyase AT4G37950 50.2 6.9e-187 651.0
Lsi04g02289 . 149 662 Polysaccharide Lyase AT4G24430 62.7 3.4e-202 701.4
Lsi08g01009 . 116 635 Polysaccharide Lyase AT4G24430 58.9 1.2e-194 676.4
Lsi01g00824 . 275 808 Polysaccharide Lyase AT4G24430 51.4 1.7e-164 576.2
Lsi04g02290 . 199 632 Polysaccharide Lyase AT4G24430 54.0 3.5e-162 568.5
Lsi08g01009 . 1 429 Polysaccharide Lyase AT2G22620 51.2 1.2e-129 460.3
Lsi04g02290 . 155 507 Polysaccharide Lyase AT2G22620 52.2 6.9e-109 391.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003035 0 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 0 2 2 2 2 2 2 1 53
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi02g00573 Lsi_Chr02 FPKM 13.677159 18.174101 325.638306 325.724243 7.707649 8.639997 7.299736 503.953522 506.494476 498.249603