Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00661 ATGACACGGAGAAATACTCTGTTTCTGATTCACCCTCCGTTGATCACCGTCTTGGAGAAAATGTCAGCTTATTTGTGGAAAAGCTTCGACGAGGATGAAGATCGACCCGAGAAGCCGCGGCGATGTGGAGTTACAGAGATGAGAGGCCCTCATTACACTCTCTCGAACCGAAATGTTATTCAGGAAATTTTCGAGTCCGTGGGTCAATTTGTCGATGGGTTAAAGTTCTCCGGGGGTTCTCACAGCCTGTTACCGAGGGATTTTATGAAAGAGGTGACAGAAATGGCTCATTCACATGACATCTATGTCAGTACGGGTGACTGGGCGGAGCATTTACTTCGCAAAGGTCCATCGGGTTTCAAAGAGTATGTGGAGAAGAGGAATGCCAAGAATTTTGTTGTCTTTTATTCTGTGACAGAAGCTGGAGTGATAATTTGGTGTATGGAATGTAAACTCTTGGGATTTGACACTATTGAGCTCAACGTGGGATCACTTGAAGTTCCTGAAGAAACTCTTCTGAGATACGTGCGCTTGATTAAGAACGGTGGCCTTAGGGCTAAGCCTCAGTTTGCAGTGAAGATCAACAAGTCTGACATTCCCATCAGTGGCAATCGAGCATTTGGAGCTTATGTTGTTCCAAGACCACGATCTTCTGGTAAGGTTGCCATTTGCAAATCTGTTCTTTCTCAAGAAATGGGTCTAGGATTTGCTCAACTTGTAGAAGATGTTGATCTATTGATCAGAAGGGCTGAGAGATGCCTAGAAGCTGGGGCAGACATGATAATGATCGATGCAGACGATGTCAGTAAACATGCCGAGTCTCTTCGGGCAGATATTATTGCCAAGATCATTGGGCGTCTTGGTCTAGAGAAAACGATGTTTGAAGCATCAAATCCCAGAACATCAGAGTGGTTTATCAATCATTACGGGCCAAAGGTGAATCTTTTTGTGGATCACTCTCAAGTTATGGGTCTGGAGTGCCTCCGGGGCCGCAACCTGGGTAAAAATCATTCATCTATTCTTGGCTCCTCCTACTTTCGGATTTAA 1047 44.89 MTRRNTLFLIHPPLITVLEKMSAYLWKSFDEDEDRPEKPRRCGVTEMRGPHYTLSNRNVIQEIFESVGQFVDGLKFSGGSHSLLPRDFMKEVTEMAHSHDIYVSTGDWAEHLLRKGPSGFKEYVEKRNAKNFVVFYSVTEAGVIIWCMECKLLGFDTIELNVGSLEVPEETLLRYVRLIKNGGLRAKPQFAVKINKSDIPISGNRAFGAYVVPRPRSSGKVAICKSVLSQEMGLGFAQLVEDVDLLIRRAERCLEAGADMIMIDADDVSKHAESLRADIIAKIIGRLGLEKTMFEASNPRTSEWFINHYGPKVNLFVDHSQVMGLECLRGRNLGKNHSSILGSSYFRI 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5883840 5885984 + Lsi02G006610.1 Lsi02g00661 655403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00661 348 Gene3D Aldolase class I 28 336 IPR013785 -
Lsi02g00661 348 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 31 127 - -
Lsi02g00661 348 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 149 347 - -
Lsi02g00661 348 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 148 332 IPR003830 -
Lsi02g00661 348 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 34 132 IPR003830 -
Lsi02g00661 348 PANTHER PROTEIN HEAT-STRESS-ASSOCIATED 32 149 347 - -
Lsi02g00661 348 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 33 329 IPR036112 -
Lsi02g00661 348 PANTHER PROTEIN HEAT-STRESS-ASSOCIATED 32 31 127 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00661 - - csv:101208408 527.709