Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g00691 ATGAAGAAATTCAGACATCCAATTTCTTTTCTTGTCCTTCTTTCATTGACATGCTTCTCTTCAAGATTTTGCTATGGCGACGATACGATTACATCAACAAATTTCATCAAAGACCCTGCAACTATTATTTCCAATGCCAGTGTCTTCAAATTGGGATTCTTCACACCTTTAAATTCTACTAATCGATATGTTGGAATTTGGTTCGACAAAGTTTCCCCACAAACTGTAATGTGGGTTGCAAACAGAGACAGCCCTCTGAATGATTCTTCTGGGATTTTCACAATTTCCAAAGATGGAAATCTTGTGGTCTTAGATTCAAACAACACCATCCTTTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCAGCAACTAACAACACAATCGCTCAAATTTTAGATTCCGGAAACTTGGTTTTGAAAGATTCTACTTCGGGGGTGATTATATGGGAGAGTTTCGAACACCCTTCTGATAAATTCTTGAATTACATGAAGCTTATGACAAACACAAGAACAAATGAGCACGTGGATTTTACCTCATGGAACTCCCCTTCCGATCCATCCACAGGTAACTTTTCATTTCTGCTGGATGTTCAAAATATTCCTGAAGCTGTGGTTTTGAATGGTGGTAAAACTCATTGGCGATCTGGTCCATGGAACGGTCAGTCCTTTATTGGAATACCTGAAATGAATTCTGTTTATCTCTCTGGGTATAACCTTGCAATCCAAGATCAAACTTACACCCTTTCTCTTGCTTCCAATCTTGATACTCAACAAATTTTTTATTTGTTCATAAGCTCACAAGGGAATCTTGAGCAAAGGGATTGGGATGCTGAAAAGAAGCAATGGAATGTTAGTTGGGTTGCTCAAAAAACAGAATGTGATTTCTATGGCACTTGTGGGGCATTTGGGATTTGTAATGCAAAAACATCCCCTGTTTGCAGCTGTTTAACAGGGTTTAAGCCAAAGCAGGAAAATGAATGGAATCGAGGAAATTGGAGTAATGGGTGTGTGAGAAAAACGCCATTAAAATGTGAGAATCAGTTGAACAACAACACCAATGCTAAAGAAGATGGTTTTTTAAAAATGGGAATGGTCAAAGTTCCATTTTTGGCAGAATGGTCTAATTCCTCTGTTTCAATAGATGATTGCAGGCGCAATTGCTTGGGAAGTTGTTCTTGTAGTTCTTATGCATTTGAAAATGGCATTTGTATGCATTGGATGAATAACTTAATTGATATACAACAGTTTGAGAGCCTTGGAGCTGATCTTTACCTTCGAATCGCATTTGCAGATTTACCTACAAATAAAGTAAGAGACAAGAAAGGAATTATTATAGCCATAGTAATACCAGTAACGCTAGTCATCTTCATCATTGCCATATTCTTTTTCTGGAAATGGAAGACTAACAAACACGAGAAGAAGATAACTATGACGTATAGTGAAAAAAAGAGGATTTTGAAAAAAACAAGGGAAGATGATAATATGATTGAGGATGAAATCAAACTTGAGGAGCTACCACTTTATGATTTTGAGAAGCTAGCAATCGCAACAAATTACTTTGATTTGAGTAACAAGCTTGGGCAGGGTGGCTTTGGTCCAGTGTATAAGGGAAAATTATTAAATGGACAGGAAATAGCAGTAAAGAGGCTTTCAAGAGCTTCTAATCAAGGGTATGAAGAATTTATAAATGAAGTGAGAGTGATTTCAAAGCTACAACACAGGAATCTTGTAAGACTTTTGGGTTGTTGCATTGAAGGAGAAGAGAAGATGTTAATATATGAGTACATGCCCAACCTAAGTTTGGATGCATTGATCTTTGGCTCTCCCAAACAAAAAATTCTGGATTGGAGAAAAAGATTTAATATTATCGATGGAATTGCTCGAGGTCTTCTTTACCTCCATAGAGATTCAAGATTGAAAATTATTCATAGAGATTTGAAGGTAAGTAATATTTTGTTAGACAAAGATTTGAACTCTAAAATTTCGGATTTTGGCATGGCAAGAATCTTTTGTGGCAATGAAGTTGAAGCAAATACTTTAAGAGTTGTTGGAACTTATGGATATATGTCTCCTGAATATGCAATGCAAGGTCAATTTTCAGAGAAGTCGGATGTGTTTAGTTTTGGAGTTTTGTTACTTGAAATTATTAGCGGGAGAAGAAATACAGGATTCTACCTCCATGAATCTAGCATAAGCTTATTGGGATTTGCATGGAAATTGTGGATGGAAGACAATCTTATTCCTTTGATTGAACCAACAATATATGAACAGCGCTACCAATCAGAGATTTTGAGATGCATTCATGTGGGACTCTTATGTGTTCAAGAATTTATAAATGATAGGCCAAATGTTTCGACCATCATTTCAATGCTTAATAGTGAAATTGTTGATCTTCCTTCTCCAAAAGAACCCGGCTTTGTTGGTAGACCACATGAAAGTCACACAGAGTCATCTCAACAAAGTTCACATAAATATTCTGTAAATAGTATTACACTCACCACAATTATAGCTCGATAG 2523 36.31 MKKFRHPISFLVLLSLTCFSSRFCYGDDTITSTNFIKDPATIISNASVFKLGFFTPLNSTNRYVGIWFDKVSPQTVMWVANRDSPLNDSSGIFTISKDGNLVVLDSNNTILWSSNVSSSSSSSSATNNTIAQILDSGNLVLKDSTSGVIIWESFEHPSDKFLNYMKLMTNTRTNEHVDFTSWNSPSDPSTGNFSFLLDVQNIPEAVVLNGGKTHWRSGPWNGQSFIGIPEMNSVYLSGYNLAIQDQTYTLSLASNLDTQQIFYLFISSQGNLEQRDWDAEKKQWNVSWVAQKTECDFYGTCGAFGICNAKTSPVCSCLTGFKPKQENEWNRGNWSNGCVRKTPLKCENQLNNNTNAKEDGFLKMGMVKVPFLAEWSNSSVSIDDCRRNCLGSCSCSSYAFENGICMHWMNNLIDIQQFESLGADLYLRIAFADLPTNKVRDKKGIIIAIVIPVTLVIFIIAIFFFWKWKTNKHEKKITMTYSEKKRILKKTREDDNMIEDEIKLEELPLYDFEKLAIATNYFDLSNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASNQGYEEFINEVRVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNLSLDALIFGSPKQKILDWRKRFNIIDGIARGLLYLHRDSRLKIIHRDLKVSNILLDKDLNSKISDFGMARIFCGNEVEANTLRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGRRNTGFYLHESSISLLGFAWKLWMEDNLIPLIEPTIYEQRYQSEILRCIHVGLLCVQEFINDRPNVSTIISMLNSEIVDLPSPKEPGFVGRPHESHTESSQQSSHKYSVNSITLTTIIAR 840
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6176968 6180514 + Lsi02G006910.1 Lsi02g00691 655433
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g00691 840 Gene3D Phosphorylase Kinase; domain 1 480 597 - -
Lsi02g00691 840 Pfam Domain of unknown function (DUF3403) 795 840 IPR021820 GO:0004674
Lsi02g00691 840 Gene3D - 24 154 IPR036426 -
Lsi02g00691 840 Pfam D-mannose binding lectin 75 182 IPR001480 -
Lsi02g00691 840 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Lsi02g00691 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lsi02g00691 840 CDD PAN_AP_plant 342 430 - -
Lsi02g00691 840 SUPERFAMILY Protein kinase-like (PK-like) 503 793 IPR011009 -
Lsi02g00691 840 ProSiteProfiles Zinc finger SWIM-type profile. 378 416 IPR007527 GO:0008270
Lsi02g00691 840 Pfam PAN-like domain 356 415 IPR003609 -
Lsi02g00691 840 SMART serkin_6 522 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi02g00691 840 ProSiteProfiles Protein kinase domain profile. 522 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi02g00691 840 Pfam Protein tyrosine and serine/threonine kinase 524 789 IPR001245 GO:0004672|GO:0006468
Lsi02g00691 840 ProSiteProfiles Bulb-type lectin domain profile. 27 154 IPR001480 -
Lsi02g00691 840 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Lsi02g00691 840 CDD STKc_IRAK 528 794 - -
Lsi02g00691 840 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 11 824 - -
Lsi02g00691 840 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
Lsi02g00691 840 CDD B_lectin 33 157 IPR001480 -
Lsi02g00691 840 MobiDBLite consensus disorder prediction 808 827 - -
Lsi02g00691 840 SMART ntp_6 356 429 IPR003609 -
Lsi02g00691 840 SMART blect_4 33 157 IPR001480 -
Lsi02g00691 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Lsi02g00691 840 PANTHER - 11 824 - -
Lsi02g00691 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 222 IPR036426 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00372 Lsi-Chr1:3277497 Lsi02g00691 Lsi-Chr2:6176968 0 dispersed
Lsi02g00687 Lsi-Chr2:6143250 Lsi02g00691 Lsi-Chr2:6176968 1.59E-105 dispersed
Lsi02g00689 Lsi-Chr2:6149476 Lsi02g00691 Lsi-Chr2:6176968 1.79E-100 dispersed
Lsi02g00691 Lsi-Chr2:6176968 Lsi05g00670 Lsi-Chr5:8832092 0 dispersed
Lsi11g01496 Lsi-Chr11:23434550 Lsi02g00691 Lsi-Chr2:6176968 7.77E-59 dispersed
Lsi02g00691 Lsi-Chr2:6176968 Lsi02g00693 Lsi-Chr2:6194160 4.16E-164 proximal
Lsi02g00690 Lsi-Chr2:6170348 Lsi02g00691 Lsi-Chr2:6176968 3.74E-60 tandem
Lsi02g00691 Lsi-Chr2:6176968 Lsi02g00692 Lsi-Chr2:6191270 0 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83377 PF07714 PK_Tyr_Ser-Thr 8.30E-46 CL0016 Lsi PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g00691 - - bhj:120084137 1421.37