Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g00691 | ATGAAGAAATTCAGACATCCAATTTCTTTTCTTGTCCTTCTTTCATTGACATGCTTCTCTTCAAGATTTTGCTATGGCGACGATACGATTACATCAACAAATTTCATCAAAGACCCTGCAACTATTATTTCCAATGCCAGTGTCTTCAAATTGGGATTCTTCACACCTTTAAATTCTACTAATCGATATGTTGGAATTTGGTTCGACAAAGTTTCCCCACAAACTGTAATGTGGGTTGCAAACAGAGACAGCCCTCTGAATGATTCTTCTGGGATTTTCACAATTTCCAAAGATGGAAATCTTGTGGTCTTAGATTCAAACAACACCATCCTTTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCAGCAACTAACAACACAATCGCTCAAATTTTAGATTCCGGAAACTTGGTTTTGAAAGATTCTACTTCGGGGGTGATTATATGGGAGAGTTTCGAACACCCTTCTGATAAATTCTTGAATTACATGAAGCTTATGACAAACACAAGAACAAATGAGCACGTGGATTTTACCTCATGGAACTCCCCTTCCGATCCATCCACAGGTAACTTTTCATTTCTGCTGGATGTTCAAAATATTCCTGAAGCTGTGGTTTTGAATGGTGGTAAAACTCATTGGCGATCTGGTCCATGGAACGGTCAGTCCTTTATTGGAATACCTGAAATGAATTCTGTTTATCTCTCTGGGTATAACCTTGCAATCCAAGATCAAACTTACACCCTTTCTCTTGCTTCCAATCTTGATACTCAACAAATTTTTTATTTGTTCATAAGCTCACAAGGGAATCTTGAGCAAAGGGATTGGGATGCTGAAAAGAAGCAATGGAATGTTAGTTGGGTTGCTCAAAAAACAGAATGTGATTTCTATGGCACTTGTGGGGCATTTGGGATTTGTAATGCAAAAACATCCCCTGTTTGCAGCTGTTTAACAGGGTTTAAGCCAAAGCAGGAAAATGAATGGAATCGAGGAAATTGGAGTAATGGGTGTGTGAGAAAAACGCCATTAAAATGTGAGAATCAGTTGAACAACAACACCAATGCTAAAGAAGATGGTTTTTTAAAAATGGGAATGGTCAAAGTTCCATTTTTGGCAGAATGGTCTAATTCCTCTGTTTCAATAGATGATTGCAGGCGCAATTGCTTGGGAAGTTGTTCTTGTAGTTCTTATGCATTTGAAAATGGCATTTGTATGCATTGGATGAATAACTTAATTGATATACAACAGTTTGAGAGCCTTGGAGCTGATCTTTACCTTCGAATCGCATTTGCAGATTTACCTACAAATAAAGTAAGAGACAAGAAAGGAATTATTATAGCCATAGTAATACCAGTAACGCTAGTCATCTTCATCATTGCCATATTCTTTTTCTGGAAATGGAAGACTAACAAACACGAGAAGAAGATAACTATGACGTATAGTGAAAAAAAGAGGATTTTGAAAAAAACAAGGGAAGATGATAATATGATTGAGGATGAAATCAAACTTGAGGAGCTACCACTTTATGATTTTGAGAAGCTAGCAATCGCAACAAATTACTTTGATTTGAGTAACAAGCTTGGGCAGGGTGGCTTTGGTCCAGTGTATAAGGGAAAATTATTAAATGGACAGGAAATAGCAGTAAAGAGGCTTTCAAGAGCTTCTAATCAAGGGTATGAAGAATTTATAAATGAAGTGAGAGTGATTTCAAAGCTACAACACAGGAATCTTGTAAGACTTTTGGGTTGTTGCATTGAAGGAGAAGAGAAGATGTTAATATATGAGTACATGCCCAACCTAAGTTTGGATGCATTGATCTTTGGCTCTCCCAAACAAAAAATTCTGGATTGGAGAAAAAGATTTAATATTATCGATGGAATTGCTCGAGGTCTTCTTTACCTCCATAGAGATTCAAGATTGAAAATTATTCATAGAGATTTGAAGGTAAGTAATATTTTGTTAGACAAAGATTTGAACTCTAAAATTTCGGATTTTGGCATGGCAAGAATCTTTTGTGGCAATGAAGTTGAAGCAAATACTTTAAGAGTTGTTGGAACTTATGGATATATGTCTCCTGAATATGCAATGCAAGGTCAATTTTCAGAGAAGTCGGATGTGTTTAGTTTTGGAGTTTTGTTACTTGAAATTATTAGCGGGAGAAGAAATACAGGATTCTACCTCCATGAATCTAGCATAAGCTTATTGGGATTTGCATGGAAATTGTGGATGGAAGACAATCTTATTCCTTTGATTGAACCAACAATATATGAACAGCGCTACCAATCAGAGATTTTGAGATGCATTCATGTGGGACTCTTATGTGTTCAAGAATTTATAAATGATAGGCCAAATGTTTCGACCATCATTTCAATGCTTAATAGTGAAATTGTTGATCTTCCTTCTCCAAAAGAACCCGGCTTTGTTGGTAGACCACATGAAAGTCACACAGAGTCATCTCAACAAAGTTCACATAAATATTCTGTAAATAGTATTACACTCACCACAATTATAGCTCGATAG | 2523 | 36.31 | MKKFRHPISFLVLLSLTCFSSRFCYGDDTITSTNFIKDPATIISNASVFKLGFFTPLNSTNRYVGIWFDKVSPQTVMWVANRDSPLNDSSGIFTISKDGNLVVLDSNNTILWSSNVSSSSSSSSATNNTIAQILDSGNLVLKDSTSGVIIWESFEHPSDKFLNYMKLMTNTRTNEHVDFTSWNSPSDPSTGNFSFLLDVQNIPEAVVLNGGKTHWRSGPWNGQSFIGIPEMNSVYLSGYNLAIQDQTYTLSLASNLDTQQIFYLFISSQGNLEQRDWDAEKKQWNVSWVAQKTECDFYGTCGAFGICNAKTSPVCSCLTGFKPKQENEWNRGNWSNGCVRKTPLKCENQLNNNTNAKEDGFLKMGMVKVPFLAEWSNSSVSIDDCRRNCLGSCSCSSYAFENGICMHWMNNLIDIQQFESLGADLYLRIAFADLPTNKVRDKKGIIIAIVIPVTLVIFIIAIFFFWKWKTNKHEKKITMTYSEKKRILKKTREDDNMIEDEIKLEELPLYDFEKLAIATNYFDLSNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASNQGYEEFINEVRVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNLSLDALIFGSPKQKILDWRKRFNIIDGIARGLLYLHRDSRLKIIHRDLKVSNILLDKDLNSKISDFGMARIFCGNEVEANTLRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGRRNTGFYLHESSISLLGFAWKLWMEDNLIPLIEPTIYEQRYQSEILRCIHVGLLCVQEFINDRPNVSTIISMLNSEIVDLPSPKEPGFVGRPHESHTESSQQSSHKYSVNSITLTTIIAR | 840 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6176968 | 6180514 | + | Lsi02G006910.1 | Lsi02g00691 | 655433 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g00691 | 840 | Gene3D | Phosphorylase Kinase; domain 1 | 480 | 597 | - | - | |
Lsi02g00691 | 840 | Pfam | Domain of unknown function (DUF3403) | 795 | 840 | IPR021820 | GO:0004674 | |
Lsi02g00691 | 840 | Gene3D | - | 24 | 154 | IPR036426 | - | |
Lsi02g00691 | 840 | Pfam | D-mannose binding lectin | 75 | 182 | IPR001480 | - | |
Lsi02g00691 | 840 | ProSiteProfiles | PAN/Apple domain profile. | 346 | 430 | IPR003609 | - | |
Lsi02g00691 | 840 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 643 | 655 | IPR008271 | GO:0004672|GO:0006468 | |
Lsi02g00691 | 840 | CDD | PAN_AP_plant | 342 | 430 | - | - | |
Lsi02g00691 | 840 | SUPERFAMILY | Protein kinase-like (PK-like) | 503 | 793 | IPR011009 | - | |
Lsi02g00691 | 840 | ProSiteProfiles | Zinc finger SWIM-type profile. | 378 | 416 | IPR007527 | GO:0008270 | |
Lsi02g00691 | 840 | Pfam | PAN-like domain | 356 | 415 | IPR003609 | - | |
Lsi02g00691 | 840 | SMART | serkin_6 | 522 | 798 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lsi02g00691 | 840 | ProSiteProfiles | Protein kinase domain profile. | 522 | 798 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lsi02g00691 | 840 | Pfam | Protein tyrosine and serine/threonine kinase | 524 | 789 | IPR001245 | GO:0004672|GO:0006468 | |
Lsi02g00691 | 840 | ProSiteProfiles | Bulb-type lectin domain profile. | 27 | 154 | IPR001480 | - | |
Lsi02g00691 | 840 | Pfam | S-locus glycoprotein domain | 215 | 324 | IPR000858 | GO:0048544 | |
Lsi02g00691 | 840 | CDD | STKc_IRAK | 528 | 794 | - | - | |
Lsi02g00691 | 840 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 | 11 | 824 | - | - | |
Lsi02g00691 | 840 | Gene3D | Transferase(Phosphotransferase) domain 1 | 598 | 800 | - | - | |
Lsi02g00691 | 840 | CDD | B_lectin | 33 | 157 | IPR001480 | - | |
Lsi02g00691 | 840 | MobiDBLite | consensus disorder prediction | 808 | 827 | - | - | |
Lsi02g00691 | 840 | SMART | ntp_6 | 356 | 429 | IPR003609 | - | |
Lsi02g00691 | 840 | SMART | blect_4 | 33 | 157 | IPR001480 | - | |
Lsi02g00691 | 840 | PIRSF | SRK | 1 | 840 | IPR024171 | GO:0004674 | |
Lsi02g00691 | 840 | PANTHER | - | 11 | 824 | - | - | |
Lsi02g00691 | 840 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 75 | 222 | IPR036426 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00372 | Lsi-Chr1:3277497 | Lsi02g00691 | Lsi-Chr2:6176968 | 0 | dispersed | |
Lsi02g00687 | Lsi-Chr2:6143250 | Lsi02g00691 | Lsi-Chr2:6176968 | 1.59E-105 | dispersed | |
Lsi02g00689 | Lsi-Chr2:6149476 | Lsi02g00691 | Lsi-Chr2:6176968 | 1.79E-100 | dispersed | |
Lsi02g00691 | Lsi-Chr2:6176968 | Lsi05g00670 | Lsi-Chr5:8832092 | 0 | dispersed | |
Lsi11g01496 | Lsi-Chr11:23434550 | Lsi02g00691 | Lsi-Chr2:6176968 | 7.77E-59 | dispersed | |
Lsi02g00691 | Lsi-Chr2:6176968 | Lsi02g00693 | Lsi-Chr2:6194160 | 4.16E-164 | proximal | |
Lsi02g00690 | Lsi-Chr2:6170348 | Lsi02g00691 | Lsi-Chr2:6176968 | 3.74E-60 | tandem | |
Lsi02g00691 | Lsi-Chr2:6176968 | Lsi02g00692 | Lsi-Chr2:6191270 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83377 | PF07714 | PK_Tyr_Ser-Thr | 8.30E-46 | CL0016 | Lsi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g00691 | - | - | bhj:120084137 | 1421.37 |