Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g00755 | ATGGAAGTTGAAGACGATTATCGAAGAAAACAGCAACTCGTTCTTCTTGCTATCGTTGTTCTTGCTTCACTTGCTCTCGTTTCTTTGCTCGTTGCTTTTAGCTATTACTGCTATATCAGCAATAAGGTTTCTAAGCGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGTGGTAGTTTTGAAAATGTTAAAGAATTTTCCACTGAGAAAGGTCTCCAATTGTTCACTTTCAAGCAGCTACACTCCGCAACCGGTGGGTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGCCATGTATATCGAGGAGTCCTAAACGATGGGAGAAAGGTTGCAATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGGCTTCATTCACCATATTTGTTGGCATTGCTTGGATATTGCTCAGATAACAATCATAAATTGCTCGTATACGAGTTCATGGCAAATGGCGGTCTGCAAGAACATCTATACCCTGTTAGGAGTTCAAATTCCATCAGTGTTAAGTTGGACTGGGAAACACGGCTGAGAGTTGCTCTTGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTATGTCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTCCTGCTGGACAAAAATCTTCACGCTAAGGTTTCTGATTTTGGATTGGCAAAGATCGGCTCAGACAAAGCCGGGGGTCATGTCTCCACTCGAGTTTTGGGGACACAAGGATATGTTGCTCCTGAGTATGCACTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTCACTGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGACAGGGAGAGAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCCATGAAGGATGTTGTTCAAGTGGCAGCAATCGCAGCAATGTGTGTTCAACCGGAGGCGGATTATAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCATTGGTGAGAAATTACCGGACAACTTCAAAGCTCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCGCCTACACCGCACGACAATGCTAGTTCGGGAGACTGA | 1200 | 45.75 | MEVEDDYRRKQQLVLLAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGSFENVKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVRSSNSISVKLDWETRLRVALEAAKGLEYLHEHVCPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDRERVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTTSKLGSSSSSSATKSPTPHDNASSGD | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6928933 | 6933279 | - | Lsi02G007550.1 | Lsi02g00755 | 655497 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g00755 | 399 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 364 | IPR011009 | - | |
Lsi02g00755 | 399 | PANTHER | OS07G0227300 PROTEIN | 3 | 395 | - | - | |
Lsi02g00755 | 399 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 386 | - | - | |
Lsi02g00755 | 399 | CDD | STKc_IRAK | 94 | 367 | - | - | |
Lsi02g00755 | 399 | PANTHER | OS01G0750732 PROTEIN | 3 | 395 | - | - | |
Lsi02g00755 | 399 | ProSitePatterns | Protein kinases ATP-binding region signature. | 94 | 116 | IPR017441 | GO:0005524 | |
Lsi02g00755 | 399 | MobiDBLite | consensus disorder prediction | 374 | 399 | - | - | |
Lsi02g00755 | 399 | ProSiteProfiles | Protein kinase domain profile. | 88 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lsi02g00755 | 399 | Pfam | Protein tyrosine and serine/threonine kinase | 91 | 364 | IPR001245 | GO:0004672|GO:0006468 | |
Lsi02g00755 | 399 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 213 | 225 | IPR008271 | GO:0004672|GO:0006468 | |
Lsi02g00755 | 399 | Gene3D | Phosphorylase Kinase; domain 1 | 52 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g00755 | Lsi-Chr2:6928933 | Lsi06g00150 | Lsi-Chr6:1564114 | 1.43E-142 | dispersed | |
Lsi02g00755 | Lsi-Chr2:6928933 | Lsi06g00279 | Lsi-Chr6:3176091 | 6.33E-102 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83380 | PF07714 | PK_Tyr_Ser-Thr | 7.20E-45 | CL0016 | Lsi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g00755 | - | - | csv:101204636 | 749.969 |