Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g01071 | ATGGAAGATGATGAGTTAAAAAACAACAAAGAAATTAAAATGGAGGATTCACACAATAAGCTTCTAGAAAAGAATATAAAGAGCTACACAAAACTCCATAGCTTCAAGCAAATCTTCAATGGGTTTGCAGTTCATACAACCCCATCACAAGCCTCAAAGCTTAGAGAAGTTGATGGAGTGAAATTGGTTGAGTTAGATAGAGGAGTGAGGAAAATGACCACTTATACCCCTGAGTTTCTAGGATTAGTGCCTTCCAATAATCATAAATATTACTATAATTATAGTATTATTGATGGTGGTGGGGAAGGCATTTTGATTGGGTTTGTGGACTCTGGGATTTACCCAACACACCCAAGTTTTAGTTTTTATAATTTTCATCATCATCAAGATCATCAAGATCAAGATCAAGAAGAGGAGTTGTTTTGTGGGGTTTGTGAAGAGGGTCCTTTTTTTTCAAAAGCTTCTTGCAATGGGAAGATAGTGAGTGCTAGGTTTTTCTCTGCTGGGGCTCAGGCTGTTGCAAAGCTTAACTCTTCTCTTGACTTTCTCTCCCCATTTGATGCTGAAGGCCATGGAAGCCATGTGGCATCCATAGCTGCTGGGAATGCAGGAGTTCCAGTTATTGTGAATGGTTTCTTCTATGGATTGGCCAGTGGGATTGCGCCACGTGCAAGGTTGTTAAAAGCAGTGATTGATGGAGTTGATATATTGGCATTATCAATTGGACCAAATGAACCACCAGAAGTAGGATTTACCTTCCTAAGCATATATGATATTGCCATATTATCTGCTACAAGAGCTGGAATCCTTGTTGTTCAAGCAGCTGGAAATAACGGCCCGACCCGGGCAACCGTCGTCTCTTATAGCCCTTGGGCCATCGGTGTTGCAGCCTCTGGCACTGATAGAGTTTATTCGCCCTCACTACTCCTTGGCAATGGCCAAAAACTGGTATTGGCTAAGGATGCAAAGAAGCAAAATGAAACACATTACAACATACCAAATTACAGTGAAGAGTGCCAAAATCCTGAAGCTTTTGACCCAAATATTGTTCAAAACAGCATAGTCCTCTGCTCTTTCTCACAAGGATTCCTCAATGGAACCTCTTCTCTTACAGCCATCATTCACACTGCAACAACACTCAGATTCATGGGTTTTGTTCTCATTGCAAATCCAAACTATGGTGATTTCATTGCAGAGCCCATCCCTTTCAGAGTTCCCGGCATTCTCGTCCCGAGCGTATCGGATACTCGGAATGGAAGGGGAATGGTTAGTGAATTTAAAGGAAAAGCAGGCATTGGAGAAGGAAGAGTTGCTTCATTTGGAAGTCGAGCTCCCACAGTTAGCAGATTTTCATCAAGAGGACCAGATTACATTAACATAAATAGAACTGTAGCTGATGTATTAAAGCCAGATATTCTTGCACCAGGTCACCAAATTTGGGCTGCTTGGAGCCCCCTCAGTGCCTCAGAGCCACTTTTAAAGGGATACCATTTTGCACTGTTGTCTGGAACAAGTATGGCAGCTCCTCATATTGTGGGAATAGCAGCACTTATCAAGCAAAAATATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAGGCAGAGGGATTCAACCTTCATAGTTTATATCCTTCTACTCCCTTCGATTTCGGTGCTGGCCTTGTTTCTCCGACCAATGCTTTGGACCCCGGACTCGTCTTCCCATCAGAATATGAAGACTATATAAACTTCTTGTGCTCTTTACCTGGGGTTGATCCTACCGTCATCAAAAGTGCCACCGGAGGACGGTGCAATGCCTCTGTCTCACAGCCACACCCTGCAGATCTGAACCTTCCTTCAGTCACAATATCATCCCTGGTTGGTCATCAGGTGGTGCAAAGAAGAGTGAAGAATGTAGGAGGTAAAGTGGAGACATACGTGTGGTCAGTGATCCCGCCAAACGGGACAACGGTCAACATCGATCCACCATGGTTCACAGTAGCGCCCAAAGAAGCCCAAAACTTGGAAATACAGATCAATGTCACACGCAAAATGGATCATTTTACCTTTGGGGAGATTATTTTGACAGGAAGTTTGAACCATATTGCAAGGATCCCTTTGTCAGTTTTGGCTGTTTCTGCATCCTGA | 2175 | 43.08 | MEDDELKNNKEIKMEDSHNKLLEKNIKSYTKLHSFKQIFNGFAVHTTPSQASKLREVDGVKLVELDRGVRKMTTYTPEFLGLVPSNNHKYYYNYSIIDGGGEGILIGFVDSGIYPTHPSFSFYNFHHHQDHQDQDQEEELFCGVCEEGPFFSKASCNGKIVSARFFSAGAQAVAKLNSSLDFLSPFDAEGHGSHVASIAAGNAGVPVIVNGFFYGLASGIAPRARLLKAVIDGVDILALSIGPNEPPEVGFTFLSIYDIAILSATRAGILVVQAAGNNGPTRATVVSYSPWAIGVAASGTDRVYSPSLLLGNGQKLVLAKDAKKQNETHYNIPNYSEECQNPEAFDPNIVQNSIVLCSFSQGFLNGTSSLTAIIHTATTLRFMGFVLIANPNYGDFIAEPIPFRVPGILVPSVSDTRNGRGMVSEFKGKAGIGEGRVASFGSRAPTVSRFSSRGPDYININRTVADVLKPDILAPGHQIWAAWSPLSASEPLLKGYHFALLSGTSMAAPHIVGIAALIKQKYPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNLHSLYPSTPFDFGAGLVSPTNALDPGLVFPSEYEDYINFLCSLPGVDPTVIKSATGGRCNASVSQPHPADLNLPSVTISSLVGHQVVQRRVKNVGGKVETYVWSVIPPNGTTVNIDPPWFTVAPKEAQNLEIQINVTRKMDHFTFGEIILTGSLNHIARIPLSVLAVSAS | 724 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11826376 | 11839982 | - | Lsi02G010710.1 | Lsi02g01071 | 655813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g01071 | 724 | Pfam | Fibronectin type-III domain | 624 | 718 | IPR041469 | - | |
Lsi02g01071 | 724 | Gene3D | - | 301 | 440 | - | - | |
Lsi02g01071 | 724 | Gene3D | - | 594 | 721 | - | - | |
Lsi02g01071 | 724 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 77 | 577 | - | - | |
Lsi02g01071 | 724 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 11 | 719 | IPR045051 | - | |
Lsi02g01071 | 724 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 503 | 513 | IPR023828 | - | |
Lsi02g01071 | 724 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 70 | IPR037045 | - | |
Lsi02g01071 | 724 | PRINTS | Subtilisin serine protease family (S8) signature | 101 | 120 | IPR015500 | - | |
Lsi02g01071 | 724 | PRINTS | Subtilisin serine protease family (S8) signature | 502 | 518 | IPR015500 | - | |
Lsi02g01071 | 724 | PRINTS | Subtilisin serine protease family (S8) signature | 187 | 200 | IPR015500 | - | |
Lsi02g01071 | 724 | Pfam | Subtilase family | 101 | 542 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi02g01071 | 724 | Gene3D | Peptidase S8/S53 domain | 103 | 590 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi02g01071 | 724 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT2.6 | 11 | 719 | - | - | |
Lsi02g01071 | 724 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 191 | 201 | IPR022398 | - | |
Lsi02g01071 | 724 | SUPERFAMILY | Subtilisin-like | 54 | 582 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi02g01071 | 724 | Pfam | Peptidase inhibitor I9 | 11 | 70 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g01071 | Lsi-Chr2:11826376 | Lsi11g00788 | Lsi-Chr11:9148837 | 1.56E-172 | dispersed | |
Lsi02g01071 | Lsi-Chr2:11826376 | Lsi10g00488 | Lsi-Chr10:7018143 | 1.22E-79 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g01071 | - | - | csv:101204623 | 1184.86 |