Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g01204 | ATGGCGGACGAAGTTCAGAATGATGTGAATGATCAGGTGGCAGATATTGCCCCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTTCAGGATCCGACTGAGGAGATTGTTGACAAGTTAGCAGAGAAAACTGAAAGTTTGTCAGTTTCTGATGGTTTGGAGACCACATTTTCCGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCTAGCTCCTTGAATGACGATGGTGCTGATGTTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGACCGTGAGGGAATTGTTCTACAGTATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGTCGGGTATTCAACATTCTTAGAGAGAATAATCCAGAGCTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGGCAGCCAGACCATGTTATGGCTTTCTTACTAGCCGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGTCGATATGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCAGACACTATCCTTTCAAAGGAGAACCGGCTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGCTTTGTTGCTCGTGTTGGCCGGAGGAACACTGGGACATGA | 810 | 44.2 | MADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTEEIVDKLAEKTESLSVSDGLETTFSGLKKKKKKPVEASSLNDDGADVTEDLEDQAGENEDREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15464005 | 15474632 | + | Lsi02G012040.1 | Lsi02g01204 | 655946 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g01204 | 269 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 269 | IPR045196 | GO:0003743|GO:0006413 | |
Lsi02g01204 | 269 | MobiDBLite | consensus disorder prediction | 60 | 75 | - | - | |
Lsi02g01204 | 269 | Gene3D | - | 112 | 254 | - | - | |
Lsi02g01204 | 269 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 218 | 253 | IPR016190 | GO:0003743|GO:0006413 | |
Lsi02g01204 | 269 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT | 1 | 269 | - | - | |
Lsi02g01204 | 269 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Lsi02g01204 | 269 | MobiDBLite | consensus disorder prediction | 79 | 93 | - | - | |
Lsi02g01204 | 269 | Pfam | Domain found in IF2B/IF5 | 138 | 247 | IPR002735 | GO:0003743|GO:0006413 | |
Lsi02g01204 | 269 | MobiDBLite | consensus disorder prediction | 47 | 96 | - | - | |
Lsi02g01204 | 269 | SMART | eIF2Bneu4 | 139 | 248 | IPR002735 | GO:0003743|GO:0006413 | |
Lsi02g01204 | 269 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 114 | 221 | IPR016189 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g01204 | Lsi-Chr2:15464005 | Lsi08g00945 | Lsi-Chr8:17924831 | 2.48E-08 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g01204 | K03238 | - | csv:101220978 | 513.457 |