Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01250 ATGGTTGACAACGGCGAGGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACTATGGGTCGCAACGAGTCCATGGCCGATGATATTCTTCAGATTTTTTCCAATTTTGATGCTAGGTTTTCCCTTGATAAGTTGTCTGATAAAGCTGATGAACTTGATCCCAGAGCCCCCGCTGCTTTGCAACGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGCTGCCGACCACCCCATTTGGGCTGACTCCGCCGATTCCTCTGCTTTTCTTGATGCTATCGATGAGTTGATGGCTATCATCAGGGATTGGGCGCCTATGGCTAGGGATAAGTCTGTTGCCGCCTACCTTGCACGCGCCGACGATCTGATGCAGCAGGCTATGTTCCGTGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAATTGACTCGCCATTTCAGGAACGGTGAGTCAACGGGGGATTTCTGCTTCGATTCTGAGGAAGATGAGGACGGTGCGGAAGGAATTCTTGGCGATGGCAATGCTCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAACATCGTTATTGATGCGCTCCCGTCGGGGACTATCAGCGATCTCCATGAAATAGCGAAGCGTATGGTGGCGGCTGGGTTCGAGAAAGAGTGTTCACACGCTTACAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATCGAGGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAACGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATTCTCTTCCCAAGTGAACGACGCCTCTGCGAACGCGTCTTCGTCGGCCTTTCCTCCACCGCCGATCTTTCTTTCATGGAGGTCTGCCGTGGATCGACTATTCAGCTATTGAATTTTGCAGATGCGGTAGCAATTGGCTCCCGCGCTCCGGAACGACTTTTCAAAATCCTCGATATGTTCGAGACCTTGAGAGACTTGATGCCAGAGTTCGATTCAATATTTTCAGACCAGTACTGCTTGTTGCTTAGAAATGAAGCAATTACAATCTGGAAACGGTTAGGCGGAACAATCAAAGGGATCTTCATGGAGCTTGAGAATTTGATCCGCCGTGATCCGGCTAAAACTCCGGTCCCAGGGGGCGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAGTCGCGGCAGACTTTGGAGCAAGTTTTCGAAGAAGCTGCTCTTCCCTCTAAGGATTACACCAAGCTCGAGGACAGAGCAGCAGCATCGTCTTCCTTATCAGTTCAAATGGACTGGATTATGGAGCTTTTAGAGAGCAATTTAGAGGCGAAATCGAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGCGACGATTGGATTCGAAAACACTCGGTTAAAAACCGGCAATACCTTGGAAACTACCTGAAAAGCTCATGGAGCAAGGTGGTCGGAGCATTGAAAATGGACAGTGGCACTTTAGCTCCGGCTGTGATGAAGGAGAAGCTTCAATCATTCAATATGCAGTTTGAAGAAATCTGCCAAACCCAGTCCACATGGGTGATATTTGAACATCAGCTTAAAGAAGAAGCAAGAATCTCAGTTGCCAAAATCCTGTTGCCAGCATATCAAAAGTTCATAGGAAGATACCAGAGTTTGCCGGAGTTGGCAAAGCGCACAGACCGGTATTTGAAATACACGGCGGAGGATATGGAGGCTCGAATCACCGAGCTGTTCGAAGGTGGCGGCGGCGGCTCGGGCAGTGGAAGGAGGTAA 1911 49.19 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKADELDPRAPAALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMAIIRDWAPMARDKSVAAYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEDGAEGILGDGNALQIPVAQPVTDYNIVIDALPSGTISDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIEEVQKMQWHDLEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSTADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSIFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQVFEEAALPSKDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKNRQYLGNYLKSSWSKVVGALKMDSGTLAPAVMKEKLQSFNMQFEEICQTQSTWVIFEHQLKEEARISVAKILLPAYQKFIGRYQSLPELAKRTDRYLKYTAEDMEARITELFEGGGGGSGSGRR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16449094 16451004 + Lsi02G012500.1 Lsi02g01250 655992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01250 636 Pfam Exo70 exocyst complex subunit 268 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lsi02g01250 636 SUPERFAMILY Cullin repeat-like 83 625 IPR016159 -
Lsi02g01250 636 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 625 - -
Lsi02g01250 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 625 IPR004140 GO:0000145|GO:0006887
Lsi02g01250 636 Gene3D Exocyst complex component Exo70 82 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01250 Lsi-Chr2:16449094 Lsi07g00009 Lsi-Chr7:125965 1.73E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01250 K07195 - csv:101204511 1174.07