Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01264 ATGAACAACCCATCACAGGAAAATGTTGAAACAGAAGGCATCTCTCCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGTTGGCTTACCAAAGTCTAGGAGTTGTTTATGGGGACCTCAGCACCTCCCCTCTCTATGTCTACAAAACCACCTTCTCTGGAAAATTGAGTCTCCATGAGAATGATGAAGAGATTTATGGGGTTCTATCCTTTATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGACGATAACGGAGAAGGGGGTACCTTTGCATTGTACTCTCTTCTCTGCAGGCATGCTAGATTATGCATTCTACCAAATCAAGAGCCTGTAGATGAACAGTTATCGGCATATGGCATTAAGGGAATCTCGGAGACAAGGCCAAGTGCTGCTCTAAAGTCTTTTTTTCGGCTGCATCCGTCCTTTCGCAGAGGTTTCTTGTTGTTCGTTCTCTTTGGAACCTGCATGACTATTGGTGATGGAGTGCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTATGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGACTGTTCTCCCTCCAGCATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCGATCATCACGACATGGCTTGCCTGTATTAGCGTTATCGGAATGTATAATATTATCAAATGGAACCCAAGTATATATCACGCACTCTCTCCAGTTTATATGCTGAAATTCCTTCGAAGCACAGGTGTTGAAGGTGTGGAGACAATGTTTGCTGATTTAGGCCACTTCTCTTCACTTTCGATCAAGATTGCCTTCACATTTCTTGTATATCCCTCCTTGGTACTTGCTTATTTGGGTGAGGCTGCATTCCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCAGTGTTCGTCGTGGCCACTTTTGCTTCTGTCATAGGAAGCCAGGCCGTGATTTCGGCAACATTCTCCCTCGTAAACCAGTGCTGTGCTCTGAATTGTTTCCCCCATGTGAAAACTATGCACACTTCAAACCAGATATATGGGCAGATTTATATCCCTGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAACATGATAGGGCATGCATATGGGCTGGCAGTCACCATTGTTATGTTTGTCTCAACTTGCTTGATGACACTTGTGATAATAATTGTTTGGAAGCAGAGGTTGATCAATGCCATAGTGTTTTTCATGTTTTTCGGGTCAATCGAACTACTTTACATCTCTGCATCAATCGTCAAAGTTCATGAAGGCGGTTGGATCCCTCTCGTGTTTTCTACTATCTTTATGTGTTCAATGTATGCATGGTACTATGGGACAATGAAGAAACACGAATACGACGACGAGAACAAAGTGTCAATGAATAGGATACTTTCTTCAGGGCCTAGCCTCGGCATAGTGCGTGTGCCTGGAATTGGACTCATATACACTAATCTGGTCGCTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTGCTTGTATTTGTTTGTATAAAATACGTTCAGGTTCCCCATATTGACGAAGAAGATCGTTTGCTCATTACGAGGGTGGGGCCGAAAGAATGCAACATGTTTCGGTGCATTATCCGGTACGGTTACAGGGATTTGCTACAAGAAAACTACAATTTGGAGAACAGATTGGTGCTTTCGTTAGTGCATTATGTAGAAACAGAAGATAACTTTTGGAAACCAATGACAGAAGTCTCTTTAGGGTGTGAAAATTCAGAAGAACCTTGTGAATATGAACCATTGGAACAGGCTTTTACAAGCTCAAATATGTTGCAGTCTTCAAACAAATATCAAACAACGGATACCGCAGCCGACGATCGGGAAAAGTATATACATAACGAGGAAGCGATGCAGATATTGAGAGCGAAAGAATCGGGAATCACGTACATCTTTGGACATTGTTCAGTCAAGGCCAAGAAATCATCTTCCATTTTCAAGAAGTTAGCCATTGATATTGTGTATGCTTTTTTGAAACAGAATTGTAGAGAGCCTGAGGTTTTACTGAATGTGCCTCACACTTCTCTCTTGGAAGTTGGCATGGTATATTATGTATAG 2235 41.92 MNNPSQENVETEGISPKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEQLSAYGIKGISETRPSAALKSFFRLHPSFRRGFLLFVLFGTCMTIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIITTWLACISVIGMYNIIKWNPSIYHALSPVYMLKFLRSTGVEGVETMFADLGHFSSLSIKIAFTFLVYPSLVLAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVIGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVSTCLMTLVIIIVWKQRLINAIVFFMFFGSIELLYISASIVKVHEGGWIPLVFSTIFMCSMYAWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLVAGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEDRLLITRVGPKECNMFRCIIRYGYRDLLQENYNLENRLVLSLVHYVETEDNFWKPMTEVSLGCENSEEPCEYEPLEQAFTSSNMLQSSNKYQTTDTAADDREKYIHNEEAMQILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIVYAFLKQNCREPEVLLNVPHTSLLEVGMVYYV 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16775702 16781401 - Lsi02G012640.1 Lsi02g01264 656006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01264 744 Pfam K+ potassium transporter 32 592 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lsi02g01264 744 TIGRFAM kup: potassium uptake protein 30 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lsi02g01264 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 617 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lsi02g01264 744 PANTHER POTASSIUM TRANSPORTER 18 617 - -
Lsi02g01264 744 PANTHER POTASSIUM TRANSPORTER 671 744 - -
Lsi02g01264 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 671 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01264 Lsi-Chr2:16775702 Lsi02g01554 Lsi-Chr2:21392597 0 dispersed
Lsi02g01264 Lsi-Chr2:16775702 Lsi03g01412 Lsi-Chr3:25070978 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01264 K03549 - csv:101222845 1379.39