Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01363 ATGGAGACTTTTACGCTTAGATCTGATTTCCAGTGTTTTTCAGCTATGGAGGAAGATAACGGCGCTCTTATTCAGAGTCTGATCGATTTAGTTAATGAGATTGCTTGGATCTCCGATTTTAGGTATACTGTTAAGAAGCAGTATTGTAATTTGTCCAGGAGATTGAAGCTTCTGATCCCAATGTTCGAAGAGATTAGAGACAGTAAAGAGACTGTTTCTGAGGATACACTCAAGGCTCTCGTATTGTTGAAAGAAGCTCTCGAATCGGCTAAGAAGTTGCTCAGATTTGGAAGCGAAGGGAGCAAGATTTTCTTGATGACTTTTTCCAATAGATGTTCTTTCTATAATTATACTTTACTTGCCGTAGAGAGGGAGCAAATTATGAACAAATTTCACGAGGTAACTGCTCGGTTGGAACAAGCCTTGGAAGGAATAGCCTACGATAAACTTGATATATCCGATGAAGTTAAAGAGCAGGTCGAGCTTGTTCTTGCTCAGTTCAGAAGGGCCAAAGGCAGGGCCGATGCTCCTGACTCTGAGCTGTTGGATGATATCCTTGCCCTTTATGACACGAGCAATGATTCTTCTATAGATCAAGACCGCCTAAGGAGACTGTCCGAAAAATTACAGTTAATAGGAATATCCGATCTTACACAAGAATCAATAGCTTTGCATGAGATGGTTTCTGCTACTGATGGAGATCCAGGTGCGAGCATTGAGAAGATGGCAGGGCTGCTAAAGAAAATAAAAGATTTCGTGCAAACGGAGAACCTTGAAACAGATACTCCTAGTAGAGAAAAGAGTCCTCCAGCAAGTTGTAGTGGACAAGTATCCAATGATAAAAATAACAAGGCCCCAATTATACCAGATGATTTTCGCTGCCCTATATCCCTGGAGCTGATGAGAGATCCTGTCATTGTCTCAACTGGACAGGTGCATGGCGTCCTGAAGTTGGAGCTGATTACGTTTCAACTTTCATCCTCCCGCTGCTCTAGTGCTGATTATACCTATGAACGTTCCTGCATTGAGAAGTGGCTTGAAGCAGGGCATGGGACGTGTCCAAAGACACAACAGAACCTCTCAAGCACTACTCTTACCCCGAATTATGTGTTGCGTAGCCTTATAGCCCAATGGTGCGAGGCTAATGGTATTGAACCACCAAAACGACCCAGCAGTGCTCGACCATGTAGAAGCTCGTCATCTTGCTCACCTGCTGAACGCACGAAGATTGATATTCTTCTTTGCAAACTTGCATCTGGAAATCCTGAAGATCAACGATCTGCAGCTGGTGAGATCCGTCTTCTCGCAAAACGGAATGCAGATAATCGTGTTGCTATTGCTGAGGCTGGTGCTATACCTCTCCTTGTCAGCCTTCTTTCAACTCCAGACTCCCGTGTTCAAGAGCATGCTGTAACAGCACTTCTTAACCTATCTATATGCGAGGACAACAAGGGAAGCATCATTTCCTCTGGGGCAGTTCCTGGTATCGTTCTCGTGCTCAAGAAGGGGAGCATGGAAGCACGGGAGAATGCTGCAGCCACTCTTTTCAGCCTTTCGGTTGTGGATGAAAATAAAGTTAGAATTGGTGCCTCCGGAGCTATCCCGCCGCTCGTTACACTGCTTAGTGAAGGCACACAAAGAGGTAAGAAAGATGCTGCAACTGCACTTTTCAACTTGTGCATCTACCAAGGAAACAAAGGCAAGGCGGTGAGAGCTGGTGTAGTTCCAACCTTAATGCAGCTTCTCACCGAGCCCGGAACCGGAATGGTGGATGAAGCCTTAGCCATCTTAGCAATACTCGCTAGCCATCCCGAAGGGAAAGCTGCCATTGGATCCGCAAAGGCAGTGCCGGTTTTGGTAGATGTTATTGGGACAGGATCTCCCAGAAACAGAGAGAATGCGGCTGCAGTTCTCGTGCACCTCTGTTCGGGAGACGAGCAACACCTAGTAGAGGCTAGGGAACTTGGAGTGATTAGTCCACTGATAGATTTGGCACGCAGTGGCACAGATAGAGGAAAGCGAAAAGCTGCACAGTTGCTTGAACGAATGAACCGACTGTTCGAGCAGGCAGCACATCAGGAGGAGCTTCGGGTGCTTCGATTACAAGCGTCGGAGTCTCAACCTCAAAGCCAACCATCACAATCAACCTCGACAACGGAGGTCGTTGGTAGCTGA 2175 46.34 METFTLRSDFQCFSAMEEDNGALIQSLIDLVNEIAWISDFRYTVKKQYCNLSRRLKLLIPMFEEIRDSKETVSEDTLKALVLLKEALESAKKLLRFGSEGSKIFLMTFSNRCSFYNYTLLAVEREQIMNKFHEVTARLEQALEGIAYDKLDISDEVKEQVELVLAQFRRAKGRADAPDSELLDDILALYDTSNDSSIDQDRLRRLSEKLQLIGISDLTQESIALHEMVSATDGDPGASIEKMAGLLKKIKDFVQTENLETDTPSREKSPPASCSGQVSNDKNNKAPIIPDDFRCPISLELMRDPVIVSTGQVHGVLKLELITFQLSSSRCSSADYTYERSCIEKWLEAGHGTCPKTQQNLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSARPCRSSSSCSPAERTKIDILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHPEGKAAIGSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQHLVEARELGVISPLIDLARSGTDRGKRKAAQLLERMNRLFEQAAHQEELRVLRLQASESQPQSQPSQSTSTTEVVGS 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18368167 18373367 + Lsi02G013630.1 Lsi02g01363 656105

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01363 724 Pfam Armadillo/beta-catenin-like repeat 439 478 IPR000225 GO:0005515
Lsi02g01363 724 Pfam Armadillo/beta-catenin-like repeat 604 643 IPR000225 GO:0005515
Lsi02g01363 724 Pfam Armadillo/beta-catenin-like repeat 522 560 IPR000225 GO:0005515
Lsi02g01363 724 Gene3D - 397 722 IPR011989 -
Lsi02g01363 724 SMART arm_5 439 479 IPR000225 GO:0005515
Lsi02g01363 724 SMART arm_5 603 643 IPR000225 GO:0005515
Lsi02g01363 724 SMART arm_5 562 602 IPR000225 GO:0005515
Lsi02g01363 724 SMART arm_5 521 561 IPR000225 GO:0005515
Lsi02g01363 724 SMART arm_5 480 520 IPR000225 GO:0005515
Lsi02g01363 724 SMART arm_5 645 685 IPR000225 GO:0005515
Lsi02g01363 724 PANTHER U BOX DOMAIN-CONTAINING 21 313 - -
Lsi02g01363 724 MobiDBLite consensus disorder prediction 700 724 - -
Lsi02g01363 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 450 492 IPR000225 GO:0005515
Lsi02g01363 724 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 385 IPR013083 -
Lsi02g01363 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 573 615 IPR000225 GO:0005515
Lsi02g01363 724 ProSiteProfiles U-box domain profile. 287 385 IPR003613 GO:0004842|GO:0016567
Lsi02g01363 724 PANTHER U BOX DOMAIN-CONTAINING 332 701 - -
Lsi02g01363 724 Coils Coil 676 696 - -
Lsi02g01363 724 SUPERFAMILY RING/U-box 288 384 - -
Lsi02g01363 724 Pfam U-box domain 332 382 IPR003613 GO:0004842|GO:0016567
Lsi02g01363 724 Pfam U-box domain 288 312 IPR003613 GO:0004842|GO:0016567
Lsi02g01363 724 MobiDBLite consensus disorder prediction 264 283 - -
Lsi02g01363 724 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 332 701 - -
Lsi02g01363 724 SUPERFAMILY ARM repeat 410 683 IPR016024 -
Lsi02g01363 724 MobiDBLite consensus disorder prediction 257 286 - -
Lsi02g01363 724 Gene3D - 22 147 IPR036537 GO:0007166
Lsi02g01363 724 SMART Ubox_2 291 378 IPR003613 GO:0004842|GO:0016567
Lsi02g01363 724 CDD RING-Ubox_PUB 292 358 IPR045210 -
Lsi02g01363 724 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 21 313 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01363 - - - csv:101218572 1112.06
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00373 Lsi-Chr1:3288460 Lsi02g01363 Lsi-Chr2:18368167 4.33E-55 dispersed
Lsi02g00349 Lsi-Chr2:2996314 Lsi02g01363 Lsi-Chr2:18368167 3.58E-06 dispersed
Lsi02g01363 Lsi-Chr2:18368167 Lsi04g01143 Lsi-Chr4:15795236 1.58E-10 dispersed
Lsi04g00538 Lsi-Chr4:4973740 Lsi02g01363 Lsi-Chr2:18368167 1.29E-72 dispersed
Lsi04g02082 Lsi-Chr4:27995693 Lsi02g01363 Lsi-Chr2:18368167 3.52E-30 dispersed
Lsi08g01242 Lsi-Chr8:20872399 Lsi02g01363 Lsi-Chr2:18368167 1.90E-28 dispersed
Lsi08g01525 Lsi-Chr8:23309098 Lsi02g01363 Lsi-Chr2:18368167 9.82E-67 dispersed
Lsi03g00296 Lsi-Chr3:3597088 Lsi02g01363 Lsi-Chr2:18368167 1.98E-113 transposed
Lsi04g00088 Lsi-Chr4:1040825 Lsi02g01363 Lsi-Chr2:18368167 0 transposed
Lsi04g02405 Lsi-Chr4:31185033 Lsi02g01363 Lsi-Chr2:18368167 1.04E-06 transposed
Lsi08g00778 Lsi-Chr8:16156667 Lsi02g01363 Lsi-Chr2:18368167 6.00E-15 transposed
Lsi09g00646 Lsi-Chr9:7207350 Lsi02g01363 Lsi-Chr2:18368167 4.66E-83 transposed
Lsi09g00669 Lsi-Chr9:7513534 Lsi02g01363 Lsi-Chr2:18368167 8.88E-06 transposed
Lsi10g00826 Lsi-Chr10:11573842 Lsi02g01363 Lsi-Chr2:18368167 1.13E-165 transposed
Lsi10g01368 Lsi-Chr10:17834008 Lsi02g01363 Lsi-Chr2:18368167 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g428 . Blo03g01237 Bda02g00818 . . Bpe08g01367 Bma14g00501 . Cmo13g00131 . Cma01g00596 Cma13g00132 Car01g00541 Car13g00102 . . Cpe20g00814 Bhi08g00620 . . . . . . Cla02g01975 Cam02g2095 Cec02g2133 Cco02g2163 Clacu02g2083 Cmu02g2020 Cre02g2329 . . Cone18ag0344 Cone11ag1246 Lsi02g01363 Csa06g01498 Chy11g01242 Cme11g01284 . Blo14g00121 Bda07g00590 . . Bpe11g00764 . Bma11g00122 Sed05g2955 . . . Cma20g00410 . Car20g00358 . . Bhi10g00688 Tan05g0378 Cmetu11g2533 . . . . Cla03g00152 Cam03g0158 Cec03g0157 Cco03g0164 Clacu03g0161 Cmu03g0778 Cre03g0473 . Csa01g02400 Chy12g00185 Cme12g00199
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi03g01518 . 1 1097 U-box Gene Family AT5G15400 70.7 0.0e+00 1494.2
Lsi10g00540 . 168 756 U-box Gene Family AT2G23140 64.5 4.3e-114 409.1
Lsi08g01601 . 1 779 U-box Gene Family AT1G24330 59.2 8.5e-242 833.6
Lsi04g00666 . 45 799 U-box Gene Family AT1G24330 57.9 4.1e-228 788.1
Lsi08g01601 . 1 778 U-box Gene Family AT1G67530 59.9 2.1e-240 828.9
Lsi04g00666 . 45 800 U-box Gene Family AT1G67530 56.8 1.8e-223 772.7
Lsi01g00373 . 1 362 U-box Gene Family AT4G21350 61.5 4.4e-119 424.9
Lsi05g01140 . 135 460 U-box Gene Family AT3G07360 55.3 4.9e-82 301.6
Lsi04g01143 CCT 260 419 U-box Gene Family AT1G71020 72.0 3.5e-60 229.6
Lsi04g00088 . 213 414 U-box Gene Family AT1G71020 51.2 4.4e-47 186.0
Lsi10g01368 . 305 474 U-box Gene Family AT1G71020 56.2 8.4e-46 181.8
Lsi02g01363 . 288 481 U-box Gene Family AT1G71020 50.8 6.0e-44 175.6
Lsi04g01143 CCT 16 623 U-box Gene Family AT1G23030 55.4 2.3e-96 350.1
Lsi10g01368 . 143 684 U-box Gene Family AT2G28830 51.0 5.5e-100 362.1
Lsi02g01363 . 117 689 U-box Gene Family AT2G28830 56.9 6.0e-99 358.6
Lsi02g01363 . 16 720 U-box Gene Family AT3G46510 64.3 1.1e-160 563.9
Lsi10g01368 . 3 687 U-box Gene Family AT3G46510 62.2 4.4e-154 542.0
Lsi04g00088 . 9 623 U-box Gene Family AT3G46510 58.1 4.0e-123 439.1
Lsi04g00088 . 10 625 U-box Gene Family AT3G54850 68.7 1.3e-166 583.6
Lsi10g01368 . 13 677 U-box Gene Family AT3G54850 53.4 2.8e-110 396.4
Lsi02g01363 . 23 681 U-box Gene Family AT3G54850 52.6 5.2e-96 349.0
Lsi10g00826 . 93 648 U-box Gene Family AT5G42340 64.0 1.1e-115 414.5
Lsi01g01607 . 9 669 U-box Gene Family AT5G01830 57.4 1.1e-197 686.8
Lsi02g00832 . 1 714 U-box Gene Family AT1G29340 65.9 4.4e-248 854.4
Lsi05g00339 . 27 435 U-box Gene Family AT5G37490 50.5 4.5e-107 385.2
Lsi10g01136 . 10 410 U-box Gene Family AT3G52450 50.9 3.7e-117 418.7
Lsi03g01816 . 1 404 U-box Gene Family AT3G52450 50.6 1.0e-114 410.6
Lsi01g01651 . 14 155 U-box Gene Family AT3G52450 57.7 4.9e-45 179.1
Lsi03g01816 . 1 403 U-box Gene Family AT2G35930 54.5 1.7e-119 426.4
Lsi10g01136 . 10 409 U-box Gene Family AT2G35930 52.3 1.3e-116 416.8
Lsi01g01651 . 14 158 U-box Gene Family AT2G35930 56.6 1.4e-46 184.1
Lsi05g00219 . 9 424 U-box Gene Family AT3G19380 64.2 2.8e-146 515.4
Lsi05g00219 . 1 424 U-box Gene Family AT1G49780 64.6 4.5e-152 534.6
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G64660 53.9 1.4e-121 433.3
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G09800 50.8 3.6e-106 382.1
Lsi04g01467 CCT 1 454 U-box Gene Family AT3G49810 63.5 2.4e-156 548.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT3G49810 61.5 5.8e-150 527.7
Lsi04g01467 CCT 1 454 U-box Gene Family AT5G65920 62.4 2.6e-150 528.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT5G65920 62.3 6.3e-149 524.2
Lsi05g01216 . 2172 2672 U-box Gene Family AT3G49060 50.2 7.4e-137 485.0
Lsi05g02044 CCT 1 880 U-box Gene Family AT2G45910 50.2 2.5e-223 772.3
Lsi09g00480 . 22 822 U-box Gene Family AT4G25160 51.9 1.3e-214 743.4
Lsi02g01538 . 1 548 U-box Gene Family AT5G40140 53.8 2.7e-96 349.7
Lsi08g00778 . 4 813 U-box Gene Family AT1G76390 60.8 1.1e-268 922.9
Lsi08g00778 . 13 813 U-box Gene Family AT1G20780 61.8 2.4e-279 958.4
Lsi08g01601 . 1 780 U-box Gene Family AT1G27910 62.0 1.2e-264 909.4
Lsi04g00666 . 45 811 U-box Gene Family AT1G27910 62.7 1.5e-262 902.5
Lsi01g00896 . 672 1220 U-box Gene Family AT5G67530 73.8 1.6e-235 812.4
Lsi03g01872 . 12 162 U-box Gene Family AT5G67530 50.3 9.1e-42 168.7
Lsi01g00816 . 6 802 U-box Gene Family AT5G65500 50.2 1.3e-208 723.4
Lsi05g01766 . 1 517 U-box Gene Family AT1G04510 74.4 6.6e-222 766.9
Lsi05g01766 . 1 486 U-box Gene Family AT2G33340 73.6 4.6e-209 724.2
Lsi05g01139 . 9 150 U-box Gene Family AT3G07370 59.2 5.2e-40 161.8
Lsi03g01518 . 1 1097 U-box Gene Family AT5G15400 70.7 0.0e+00 1494.2
Lsi10g00540 . 168 756 U-box Gene Family AT2G23140 64.5 4.3e-114 409.1
Lsi08g01601 . 1 779 U-box Gene Family AT1G24330 59.2 8.5e-242 833.6
Lsi04g00666 . 45 799 U-box Gene Family AT1G24330 57.9 4.1e-228 788.1
Lsi08g01601 . 1 778 U-box Gene Family AT1G67530 59.9 2.1e-240 828.9
Lsi04g00666 . 45 800 U-box Gene Family AT1G67530 56.8 1.8e-223 772.7
Lsi01g00373 . 1 362 U-box Gene Family AT4G21350 61.5 4.4e-119 424.9
Lsi05g01140 . 135 460 U-box Gene Family AT3G07360 55.3 4.9e-82 301.6
Lsi04g01143 CCT 260 419 U-box Gene Family AT1G71020 72.0 3.5e-60 229.6
Lsi04g00088 . 213 414 U-box Gene Family AT1G71020 51.2 4.4e-47 186.0
Lsi10g01368 . 305 474 U-box Gene Family AT1G71020 56.2 8.4e-46 181.8
Lsi02g01363 . 288 481 U-box Gene Family AT1G71020 50.8 6.0e-44 175.6
Lsi04g01143 CCT 16 623 U-box Gene Family AT1G23030 55.4 2.3e-96 350.1
Lsi10g01368 . 143 684 U-box Gene Family AT2G28830 51.0 5.5e-100 362.1
Lsi02g01363 . 117 689 U-box Gene Family AT2G28830 56.9 6.0e-99 358.6
Lsi02g01363 . 16 720 U-box Gene Family AT3G46510 64.3 1.1e-160 563.9
Lsi10g01368 . 3 687 U-box Gene Family AT3G46510 62.2 4.4e-154 542.0
Lsi04g00088 . 9 623 U-box Gene Family AT3G46510 58.1 4.0e-123 439.1
Lsi04g00088 . 10 625 U-box Gene Family AT3G54850 68.7 1.3e-166 583.6
Lsi10g01368 . 13 677 U-box Gene Family AT3G54850 53.4 2.8e-110 396.4
Lsi02g01363 . 23 681 U-box Gene Family AT3G54850 52.6 5.2e-96 349.0
Lsi10g00826 . 93 648 U-box Gene Family AT5G42340 64.0 1.1e-115 414.5
Lsi01g01607 . 9 669 U-box Gene Family AT5G01830 57.4 1.1e-197 686.8
Lsi02g00832 . 1 714 U-box Gene Family AT1G29340 65.9 4.4e-248 854.4
Lsi05g00339 . 27 435 U-box Gene Family AT5G37490 50.5 4.5e-107 385.2
Lsi10g01136 . 10 410 U-box Gene Family AT3G52450 50.9 3.7e-117 418.7
Lsi03g01816 . 1 404 U-box Gene Family AT3G52450 50.6 1.0e-114 410.6
Lsi01g01651 . 14 155 U-box Gene Family AT3G52450 57.7 4.9e-45 179.1
Lsi03g01816 . 1 403 U-box Gene Family AT2G35930 54.5 1.7e-119 426.4
Lsi10g01136 . 10 409 U-box Gene Family AT2G35930 52.3 1.3e-116 416.8
Lsi01g01651 . 14 158 U-box Gene Family AT2G35930 56.6 1.4e-46 184.1
Lsi05g00219 . 9 424 U-box Gene Family AT3G19380 64.2 2.8e-146 515.4
Lsi05g00219 . 1 424 U-box Gene Family AT1G49780 64.6 4.5e-152 534.6
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G64660 53.9 1.4e-121 433.3
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G09800 50.8 3.6e-106 382.1
Lsi04g01467 CCT 1 454 U-box Gene Family AT3G49810 63.5 2.4e-156 548.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT3G49810 61.5 5.8e-150 527.7
Lsi04g01467 CCT 1 454 U-box Gene Family AT5G65920 62.4 2.6e-150 528.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT5G65920 62.3 6.3e-149 524.2
Lsi05g01216 . 2172 2672 U-box Gene Family AT3G49060 50.2 7.4e-137 485.0
Lsi05g02044 CCT 1 880 U-box Gene Family AT2G45910 50.2 2.5e-223 772.3
Lsi09g00480 . 22 822 U-box Gene Family AT4G25160 51.9 1.3e-214 743.4
Lsi02g01538 . 1 548 U-box Gene Family AT5G40140 53.8 2.7e-96 349.7
Lsi08g00778 . 4 813 U-box Gene Family AT1G76390 60.8 1.1e-268 922.9
Lsi08g00778 . 13 813 U-box Gene Family AT1G20780 61.8 2.4e-279 958.4
Lsi08g01601 . 1 780 U-box Gene Family AT1G27910 62.0 1.2e-264 909.4
Lsi04g00666 . 45 811 U-box Gene Family AT1G27910 62.7 1.5e-262 902.5
Lsi01g00896 . 672 1220 U-box Gene Family AT5G67530 73.8 1.6e-235 812.4
Lsi03g01872 . 12 162 U-box Gene Family AT5G67530 50.3 9.1e-42 168.7
Lsi01g00816 . 6 802 U-box Gene Family AT5G65500 50.2 1.3e-208 723.4
Lsi05g01766 . 1 517 U-box Gene Family AT1G04510 74.4 6.6e-222 766.9
Lsi05g01766 . 1 486 U-box Gene Family AT2G33340 73.6 4.6e-209 724.2
Lsi05g01139 . 9 150 U-box Gene Family AT3G07370 59.2 5.2e-40 161.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004307 2 2 3 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi02g01363 Lsi_Chr02 FPKM 81.355652 101.535439 48.746414 51.24192 91.875061 90.122971 87.34211 60.367287 58.871887 56.566696