Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01367 ATGGCGAAAATCCTAATTTCATCTTCACCCTTCGTCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGTTCGTCTCCACAATCTTCCTCACCGGAGACACGTCGCCACCAGAGTCAATTTCAGCTTCCATGAACTTCCCCCCATCCATACTTTTGATTCTGCCTTCAATTTTGAAGCAAGTGTTAGCAGAGCCGAAGGCCTGCTCTATACACTTGCTGACGCAGCGGTTGCAGTGGATTCCACTGTTTCAGGTGGCGCCGCATCGACTTCCGCTGATACCGTGGTGCAGAAGAATGGCGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTGGTTCTTAAAGTGTTGAAGGATGGACTTGCGGCTGTGCACGTCCCATATTCATATGGATTTGCAATTATTTTACTTACTGTTATCGTTAAAGTTGCAACTTTTCCTCTCACTAAGCAGCAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCGAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGGCTTTATAGACAAGCAGGAGTTAATCCTTTGGCAGGTTGTTTACCAACTTTAGCCACCATACCTGTCTGGATTGGCCTATATCAGGCCCTTTCTAATGTGGCAAATGAGGGATTATTCACTGAAGGTTTCTTTTGGATCCCCTCTCTTGGTGGACCAACTACTATTGCTGCTCGACAAAGTGGATCTGGAATCTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTATGACACTGCAGCATACCTTGTATTACCTGTTCTCCTCGTCATATCTCAGTATGTATCGATGGAACTCATGAAGCCTCCCCAGACTGATGATCCGGCACAAAAGAACACACTCCTTATTTTCAAGTTTCTTCCTCTCATGATCGGTTACTTCTCCTTGTCTGTTCCGTCGGGATTATCAATTTACTGGTTCACAAACAATGTTCTCAGCACGGCTCAGCAAGTATGGTTACGCAAATTAGGAGGTGCAAAGCCTGTTGTAAGTGAGGATGCTGCTGGAATCATAACAGCTGGACGAGCCAAACGAACGTCTGAATCAGAAAGAACGGGTGACAGGCAGTTAAGGGAAAATGACAAGAAGAATAAGTTAAGCAAGGCGGCTCGATCAGAAGAGATTCAAACTTTGGCTTCTGAGTCTGATAATGAGGATGGGTATGATGGGGAGACAACTGAGAAGGGTGAGGACAGTCTAGAAGAGGCATATGCATCTAGTGCAGACAAAGACGTCCCAGCTTATAATCGACAAAAGAGAAGCAAGCGATCAAAGAGGAAACGTGCAGTATGA 1356 45.58 MAKILISSSPFVGSSLPSLSRHVRLHNLPHRRHVATRVNFSFHELPPIHTFDSAFNFEASVSRAEGLLYTLADAAVAVDSTVSGGAASTSADTVVQKNGGWFGFISEAMEVVLKVLKDGLAAVHVPYSYGFAIILLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLVISQYVSMELMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVSEDAAGIITAGRAKRTSESERTGDRQLRENDKKNKLSKAARSEEIQTLASESDNEDGYDGETTEKGEDSLEEAYASSADKDVPAYNRQKRSKRSKRKRAV 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18469491 18497363 + Lsi02G013670.1 Lsi02g01367 656109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01367 451 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 445 - -
Lsi02g01367 451 MobiDBLite consensus disorder prediction 365 391 - -
Lsi02g01367 451 Pfam 60Kd inner membrane protein 129 343 IPR001708 GO:0016021|GO:0032977
Lsi02g01367 451 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 128 342 IPR028055 -
Lsi02g01367 451 PANTHER OXA1 1 445 IPR001708 GO:0016021|GO:0032977
Lsi02g01367 451 MobiDBLite consensus disorder prediction 361 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01367 Lsi-Chr2:18469491 Lsi08g01627 Lsi-Chr8:24187283 5.37E-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01367 K03217 - csv:101217620 767.689