Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01380 ATGGGTAGAGGCGGGGAAAACTACGGGAAAAAAGAGATTTTTGCTGCTACCACATCGAAGAAAGAAACGTATCCTGCCTGGGCAAAGGATGTTCGAGAATGCGTAGAGAAGTACCAAGTGAACCCTGATCTTGGATTATCATCTGAAGAGGTTGAAAACAAGAGAAACATCTATGGTTACAATGAGTTGGAGAAACATGAAGGTACTTCAATCTTCAAACTGATTTTGGAACAATTTAATGACACACTAGTTAGGATTCTATTAGCTGCAGCAGTTGTATCTTTTGTTCTTGCGTGGTATGATGGCGAGGAAGGAGGTGAGATGGAGATCACAGCATTTGTGGAGCCTCTAGTTATCTTTTTGATATTGATTATCAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCTGAGAAAGCATTGGAAGCTCTTAAAGAAATTCAGTCTGAACAGGCTTCAGTAATAAGAAATGGTAAGCGAACTTCAATTGTTGCAAAAGATCTTGTTCCGGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTATTGCGTTTAATCAGCTCTACTTTTCGGGTTGAGCAAGGTTCCTTGACGGGCGAGAGTGAAGCAGTGAGCAAGACTGCCAAGGCTGTGCCAGAAGATACAGATATACAAGGGAAAAAGTGTATGGTTTTTGCAGGGACAACAGTTGTCAATGGAAATTGTATTTGCATTGTTACCCAAATAGGAATGAGCACTGAACTCGGACAGGTGCATTCTCAGATACAAGAAGCATCCCAGAGTGAAGATGATACGCCATTAAAGAAAAAGTTGAATGAGTTTGGAGAACTTTTAACAGCAATAATTGGAGTGATCTGTGCTCTAGTTTGGCTTATTAATGTCAAATACTTCCTCACTTGGGAATATGTTGATGGTTTGCCTGCAAATTTCAAGTTCTCATTTGAGAAATGTACATATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCTGCAATTCCAGAAGGTTTGCCTGCAGTCATAACAACATGCTTGGCACTTGGCACTCGGAAAATGGCCCAAAAGAATGCCCTTGTTCGTAAGCTGCCTAGTGTTGAAACACTTGGCTGTACAACTGTGATATGTTCTGATAAGACAGGTACTCTAACAACTAATCAGATGGCTGTGGCGAAAATTGTGGCTCTTGGTTCTCGTGTTGGTACTCTACGAGCTTTTGATGTGGAGGGGACTACATATGATCCTTTAGATGGAAAAATAATTGGTTGGCTTGGAGGTCAATTGGATGCTAATCTACAAATGTTGGCAAAGATCGCTGCGGTCTGTAATGATGCAGGTGTTGAAAGATCTGGCCATCATTTTGTTGCGAATGGAATGCCTACTGAAGCTGCGTTGAAGGTGCGCGTAATGTTTGATAAGCTTCTTTATGTTGTTCTATGGATCTGCCTGTTGATAAAGACAAATTTTGTTTCTGATGCCTTTTATCTGAATGTTAAGGTTCTTGTGGAAAAGATGGGGCTTCCTGAAGGATATGACTCAAGTTCAGCTACTGTTAATGGGGATGTCCTGCGATGCTGCCAAGCTTGGAATAAGAATGAGCAACGCATTGCTACTTTGGAGTTTGACCGAGACCGTAAGTCCATGGGAGTCATCACAAATTCTAAGTCAGGGAAGAAATCATTACTCGTGAAGGGTGCTGTTGAACATCTTTTGGATCGGAGTTCATTTATTCAGCTGCTTGATGGAACTATAGTGAATTTGGACTCAGACTCGAAGAGATACCTCTTAGATTGTTTGCGTGAGATGTCATCTAGTGCATTAAGGTGTCTAGGTTTTGCATACAAGGAAGATCCTCCAGAATTTTCCGATTATAATATTGGTGACGAAGACCATCCAGCACATCAGCTTCTACTTGACCCGTCCAAATACTCTACAATTGAAAGTAATCTTATTTTTGCTGGCTTTGTTGGGTTAAGGGATCCTCCTCGAAAAGAGGTTCATCAAGCAATTGAAGACTGTAAAGCTGCTGGTATTCGCGTCATGGTTATCACAGGGGACAACCAGAACACAGCTGAAGCTATATGTCGAGAAATAGGTGTATTTGGACAACATGAAGCTATAAATTCCAGAAGTTTAACTGGAAAAGAATTCATGGCAATGAGCCGGGAGGATCAAAAATTTCATCTAAGACAAGATGGAGGACTTCTTTTCTCAAGAGCCGAACCAAGACATAAACAAGAGATAGTAAGATTGCTCAAGGAAGATGGTGAAGTTGTTGCAATGACTGGAGATGGAGTCAATGATGCACCTGCCTTGAAGTTGGCTGATATTGGGATTGCGATGGGCATTGCTGGGACAGAGGTTGCAAAGGAAGCCTCTGACATGGTTCTTGCAGATGACAATTTTAGTACCATAGTTGCAGCAGTTGGTGAAGGCAGATCAATTTACGACAATATGAAGGCCTTTATCAGGTACATGATTTCCTCAAATATTGGTGAGGTTGCATCGATATTTTTGACAGCAGCACTGGGTATTCCCGAAGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTTGTTACAGATGGACCCCCAGCAACTGCGTTGGGATTTAATCCACCTGATTCCGATATAATGAAGAAACCGCCAAGGAAAAGTGACGACTCATTGATCACGGCCTGGATTTTGTTCCGCTATTTGGTGATTGGACTTTACGTAGGGTTAGCAACTGTAGGAGTATTTATTATTTGGTATACACACGGTTCATTCTTGGGCATCGACCTGTCTGGAGATGGTCACAGTCTGGTCTCCTATTCTCAGCTCGCCAACTGGGGTCAGTGCCCGTCCTGGGAAGGATTCTCCGTGTCGCCCTTCACAGCCGGGGATGAAGTTTTCAGCTTCGATTCAGATCCATGCGATTACTTCCGCTCAGGCAAGATCAAGGCATCTACCCTCTCACTCTCTGTTTTGGTCGCCATTGAGATGTTCAATTCCCTCAATGCCCTCTCCGAGGATGGAAGCTTGTTGACAATGCCCCCTTGGGTTAACCCCTGGCTCCTCCTCGCCATGTCTGTTTCATTCGGCTTACATTTCTTGATTCTGTATGTGCCGTTCCTTGCCAAAATCTTTGGCATCGTCCCACTGTCCTTGAATGAATGGCTCTTGGTTCTGGCCGTGGCATTGCCCGTGATCATAATCGATGAGATTCTGAAATTCATCGGAAGGCTTACTAGTGGGTTGAGGACTTCTCGCCCGAGCAGATTATCAAAGCAGAAATCGGAGTAA 3297 43.28 MGRGGENYGKKEIFAATTSKKETYPAWAKDVRECVEKYQVNPDLGLSSEEVENKRNIYGYNELEKHEGTSIFKLILEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIINAIVGIWQENNAEKALEALKEIQSEQASVIRNGKRTSIVAKDLVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKAVPEDTDIQGKKCMVFAGTTVVNGNCICIVTQIGMSTELGQVHSQIQEASQSEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWEYVDGLPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPLDGKIIGWLGGQLDANLQMLAKIAAVCNDAGVERSGHHFVANGMPTEAALKVRVMFDKLLYVVLWICLLIKTNFVSDAFYLNVKVLVEKMGLPEGYDSSSATVNGDVLRCCQAWNKNEQRIATLEFDRDRKSMGVITNSKSGKKSLLVKGAVEHLLDRSSFIQLLDGTIVNLDSDSKRYLLDCLREMSSSALRCLGFAYKEDPPEFSDYNIGDEDHPAHQLLLDPSKYSTIESNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAICREIGVFGQHEAINSRSLTGKEFMAMSREDQKFHLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDSDIMKKPPRKSDDSLITAWILFRYLVIGLYVGLATVGVFIIWYTHGSFLGIDLSGDGHSLVSYSQLANWGQCPSWEGFSVSPFTAGDEVFSFDSDPCDYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKIFGIVPLSLNEWLLVLAVALPVIIIDEILKFIGRLTSGLRTSRPSRLSKQKSE 1098
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18820589 18826914 + Lsi02G013800.1 Lsi02g01380 656122

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01380 1098 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
Lsi02g01380 1098 Pfam Cation transporting ATPase, C-terminus 851 1077 IPR006068 -
Lsi02g01380 1098 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1079 IPR023298 -
Lsi02g01380 1098 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 307 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01380 1098 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 740 850 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01380 1098 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 319 401 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01380 1098 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1097 - -
Lsi02g01380 1098 Pfam haloacid dehalogenase-like hydrolase 660 780 - -
Lsi02g01380 1098 Pfam Cation transport ATPase (P-type) 444 581 - -
Lsi02g01380 1098 SFLD Haloacid Dehalogenase 361 818 - -
Lsi02g01380 1098 Gene3D - 77 165 - -
Lsi02g01380 1098 PRINTS P-type cation-transporting ATPase superfamily signature 199 213 - -
Lsi02g01380 1098 PRINTS P-type cation-transporting ATPase superfamily signature 380 394 - -
Lsi02g01380 1098 PRINTS P-type cation-transporting ATPase superfamily signature 766 785 - -
Lsi02g01380 1098 PRINTS P-type cation-transporting ATPase superfamily signature 680 690 - -
Lsi02g01380 1098 PRINTS P-type cation-transporting ATPase superfamily signature 658 669 - -
Lsi02g01380 1098 PRINTS P-type cation-transporting ATPase superfamily signature 790 802 - -
Lsi02g01380 1098 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 387 662 IPR023299 GO:0000166
Lsi02g01380 1098 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1097 - -
Lsi02g01380 1098 Gene3D - 775 1083 - -
Lsi02g01380 1098 Gene3D - 208 384 - -
Lsi02g01380 1098 Gene3D - 390 665 IPR023299 GO:0000166
Lsi02g01380 1098 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Lsi02g01380 1098 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Lsi02g01380 1098 SFLD p-type atpase 361 818 IPR044492 -
Lsi02g01380 1098 Pfam E1-E2 ATPase 147 360 - -
Lsi02g01380 1098 SUPERFAMILY HAD-like 378 870 IPR036412 -
Lsi02g01380 1098 SUPERFAMILY Calcium ATPase, transduction domain A 149 259 IPR008250 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01380 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] - csv:101206729 2003.79
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01380 Lsi-Chr2:18820589 Lsi11g00805 Lsi-Chr11:9824443 3.58E-98 dispersed
Lsi11g01354 Lsi-Chr11:22164133 Lsi02g01380 Lsi-Chr2:18820589 2.39E-11 dispersed
Lsi02g01380 Lsi-Chr2:18820589 Lsi08g01538 Lsi-Chr8:23393219 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g367 . . Bda02g00797 Bda09g01488 Bpe01g00156 . . . Cmo13g00152 . Cma01g00579 Cma13g00147 Car01g00528 Car13g00117 Sed01g1060 . Cpe20g00800 Bhi08g00646 Tan01g2494 Cmetu12g0878 . Hepe10g1192 . Lcy11g0222 . . . . . . . Cone1ag0679 . Cone18ag0318 Cone11ag1268 Lsi02g01380 . . . Blo13g01094 Blo14g00140 . . Bpe08g00127 . Bma07g00120 Bma11g00140 . . . . . . . . . . . . . . . . Cla03g00170 Cam03g0179 Cec03g0176 Cco03g0186 Clacu03g0182 Cmu03g0800 Cre03g0492 . Csa01g02374 Chy12g00153 Cme12g00230
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi08g01538 . 1 1021 Primary Pumps ATPases(2) AT1G10130 80.4 0.0e+00 1590.9
Lsi10g01308 . 1 808 Primary Pumps ATPases(2) AT2G28520 73.4 0.0e+00 1209.9
Lsi08g01352 . 1 800 Primary Pumps ATPases(2) AT2G28520 56.3 1.9e-260 895.6
Lsi11g01128 . 10 745 Primary Pumps ATPases(2) AT2G28520 54.5 3.4e-225 778.5
Lsi08g01352 . 1 805 Primary Pumps ATPases(2) AT2G21410 66.4 0.0e+00 1081.6
Lsi11g01128 . 6 744 Primary Pumps ATPases(2) AT2G21410 64.9 2.4e-282 968.4
Lsi10g01308 . 9 812 Primary Pumps ATPases(2) AT2G21410 56.1 2.2e-264 908.7
Lsi08g01352 . 1 805 Primary Pumps ATPases(2) AT4G39080 66.4 4.5e-313 1070.5
Lsi11g01128 . 8 745 Primary Pumps ATPases(2) AT4G39080 66.8 3.9e-285 977.6
Lsi10g01308 . 9 812 Primary Pumps ATPases(2) AT4G39080 57.0 3.2e-263 904.8
Lsi04g02391 . 32 170 Primary Pumps ATPases(2) AT4G34720 100.0 1.6e-61 232.3
Lsi08g01343 . 28 197 Primary Pumps ATPases(2) AT4G34720 80.6 1.3e-55 212.6
Lsi08g01342 . 28 217 Primary Pumps ATPases(2) AT4G34720 71.6 2.7e-53 204.9
Lsi08g01343 . 2 197 Primary Pumps ATPases(2) AT1G75630 81.2 1.5e-68 256.1
Lsi08g01342 . 2 217 Primary Pumps ATPases(2) AT1G75630 77.3 9.4e-68 253.4
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT1G75630 79.1 1.7e-53 206.1
Lsi08g01343 . 3 197 Primary Pumps ATPases(2) AT2G16510 83.1 4.1e-69 257.7
Lsi08g01342 . 3 217 Primary Pumps ATPases(2) AT2G16510 74.9 8.6e-67 250.0
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT2G16510 100.0 2.0e-60 228.8
Lsi08g01342 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 3.1e-53 204.5
Lsi08g01343 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.2e-52 202.6
Lsi04g02391 . 33 127 Primary Pumps ATPases(2) AT1G19910 98.9 4.8e-38 154.1
Lsi08g01161 . 6 180 Primary Pumps ATPases(2) AT2G25610 85.1 3.9e-70 261.5
Lsi04g02151 . 4 187 Primary Pumps ATPases(2) AT2G25610 79.3 1.7e-68 256.1
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT4G38920 100.0 1.7e-60 228.8
Lsi08g01343 . 28 197 Primary Pumps ATPases(2) AT4G38920 80.6 3.7e-55 211.1
Lsi08g01342 . 28 217 Primary Pumps ATPases(2) AT4G38920 71.6 7.7e-53 203.4
Lsi08g01161 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 5.1e-72 267.7
Lsi04g02151 . 11 187 Primary Pumps ATPases(2) AT4G32530 76.5 8.7e-72 266.9
Lsi02g01380 . 1 1098 Primary Pumps ATPases(2) AT1G07810 78.1 0.0e+00 1651.7
Lsi02g01380 . 1 1098 Primary Pumps ATPases(2) AT1G07670 77.8 0.0e+00 1651.7
Lsi08g01538 . 1 1021 Primary Pumps ATPases(2) AT1G10130 80.4 0.0e+00 1590.9
Lsi02g01380 . 22 1079 Primary Pumps ATPases(2) AT4G00900 63.8 0.0e+00 1302.3
Lsi06g00109 . 1 145 Primary Pumps ATPases(2) AT4G02620 73.8 3.8e-54 207.6
Lsi11g01217 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.3 2.0e-268 921.4
Lsi09g00869 . 105 471 Primary Pumps ATPases(2) AT1G12840 76.8 9.1e-157 550.1
Lsi11g01651 . 1 261 Primary Pumps ATPases(2) AT3G58730 82.4 1.3e-117 419.5
Lsi03g01626 . 74 516 Primary Pumps ATPases(2) AT3G42050 80.1 1.5e-203 705.7
Lsi08g01343 . 3 197 Primary Pumps ATPases(2) AT2G16510 83.1 4.1e-69 257.7
Lsi08g01342 . 3 217 Primary Pumps ATPases(2) AT2G16510 74.9 8.6e-67 250.0
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT2G16510 100.0 2.0e-60 228.8
Lsi11g01217 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.5 2.3e-269 924.5
Lsi07g01500 . 1 185 Primary Pumps ATPases(2) AT1G64200 74.0 7.7e-67 250.4
Lsi11g01217 . 9 488 Primary Pumps ATPases(2) AT1G20260 96.0 4.1e-266 913.7
Lsi10g01308 . 1 808 Primary Pumps ATPases(2) AT2G28520 73.4 0.0e+00 1209.9
Lsi08g01352 . 1 800 Primary Pumps ATPases(2) AT2G28520 56.3 1.9e-260 895.6
Lsi11g01128 . 10 745 Primary Pumps ATPases(2) AT2G28520 54.5 3.4e-225 778.5
Lsi03g01466 . 2 197 Primary Pumps ATPases(2) AT3G28715 81.5 9.1e-95 344.0
Lsi07g01500 . 1 263 Primary Pumps ATPases(2) AT4G11150 64.8 2.1e-79 292.4
Lsi02g02834 . 1 626 Primary Pumps ATPases(2) AT1G78900 90.2 0.0e+00 1139.4
Lsi11g01217 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.3 2.0e-268 921.4
Lsi11g01217 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.5 2.3e-269 924.5
Lsi11g01217 . 9 488 Primary Pumps ATPases(2) AT1G20260 96.0 4.1e-266 913.7
Lsi09g00869 . 105 471 Primary Pumps ATPases(2) AT1G12840 76.8 9.1e-157 550.1
Lsi11g01651 . 1 261 Primary Pumps ATPases(2) AT3G58730 82.4 1.3e-117 419.5
Lsi07g01500 . 1 263 Primary Pumps ATPases(2) AT4G11150 64.8 2.1e-79 292.4
Lsi07g01500 . 1 263 Primary Pumps ATPases(2) AT3G08560 58.7 2.6e-69 258.8
Lsi07g01500 . 1 185 Primary Pumps ATPases(2) AT1G64200 74.0 7.7e-67 250.4
Lsi06g00109 . 1 145 Primary Pumps ATPases(2) AT4G02620 73.8 3.8e-54 207.6
Lsi03g01626 . 74 516 Primary Pumps ATPases(2) AT3G42050 80.1 1.5e-203 705.7
Lsi10g01308 . 1 808 Primary Pumps ATPases(2) AT2G28520 73.4 0.0e+00 1209.9
Lsi08g01352 . 1 800 Primary Pumps ATPases(2) AT2G28520 56.3 1.9e-260 895.6
Lsi11g01128 . 10 745 Primary Pumps ATPases(2) AT2G28520 54.5 3.4e-225 778.5
Lsi08g01352 . 1 805 Primary Pumps ATPases(2) AT2G21410 66.4 0.0e+00 1081.6
Lsi11g01128 . 6 744 Primary Pumps ATPases(2) AT2G21410 64.9 2.4e-282 968.4
Lsi10g01308 . 9 812 Primary Pumps ATPases(2) AT2G21410 56.1 2.2e-264 908.7
Lsi08g01352 . 1 805 Primary Pumps ATPases(2) AT4G39080 66.4 4.5e-313 1070.5
Lsi11g01128 . 8 745 Primary Pumps ATPases(2) AT4G39080 66.8 3.9e-285 977.6
Lsi10g01308 . 9 812 Primary Pumps ATPases(2) AT4G39080 57.0 3.2e-263 904.8
Lsi04g02391 . 32 170 Primary Pumps ATPases(2) AT4G34720 100.0 1.6e-61 232.3
Lsi08g01343 . 28 197 Primary Pumps ATPases(2) AT4G34720 80.6 1.3e-55 212.6
Lsi08g01342 . 28 217 Primary Pumps ATPases(2) AT4G34720 71.6 2.7e-53 204.9
Lsi08g01342 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 3.1e-53 204.5
Lsi08g01343 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.2e-52 202.6
Lsi04g02391 . 33 127 Primary Pumps ATPases(2) AT1G19910 98.9 4.8e-38 154.1
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT4G38920 100.0 1.7e-60 228.8
Lsi08g01343 . 28 197 Primary Pumps ATPases(2) AT4G38920 80.6 3.7e-55 211.1
Lsi08g01342 . 28 217 Primary Pumps ATPases(2) AT4G38920 71.6 7.7e-53 203.4
Lsi08g01343 . 2 197 Primary Pumps ATPases(2) AT1G75630 81.2 1.5e-68 256.1
Lsi08g01342 . 2 217 Primary Pumps ATPases(2) AT1G75630 77.3 9.4e-68 253.4
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT1G75630 79.1 1.7e-53 206.1
Lsi08g01343 . 3 197 Primary Pumps ATPases(2) AT2G16510 83.1 4.1e-69 257.7
Lsi08g01342 . 3 217 Primary Pumps ATPases(2) AT2G16510 74.9 8.6e-67 250.0
Lsi04g02391 . 33 170 Primary Pumps ATPases(2) AT2G16510 100.0 2.0e-60 228.8
Lsi08g01161 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 5.1e-72 267.7
Lsi04g02151 . 11 187 Primary Pumps ATPases(2) AT4G32530 76.5 8.7e-72 266.9
Lsi08g01161 . 6 180 Primary Pumps ATPases(2) AT2G25610 85.1 3.9e-70 261.5
Lsi04g02151 . 4 187 Primary Pumps ATPases(2) AT2G25610 79.3 1.7e-68 256.1
Lsi03g01466 . 2 197 Primary Pumps ATPases(2) AT3G28710 85.6 9.3e-103 370.5
Lsi03g01466 . 2 197 Primary Pumps ATPases(2) AT3G28715 81.5 9.1e-95 344.0
Lsi02g01380 . 1 1098 Primary Pumps ATPases(2) AT1G07810 78.1 0.0e+00 1651.7
Lsi02g01380 . 22 1079 Primary Pumps ATPases(2) AT4G00900 63.8 0.0e+00 1302.3
Lsi08g01538 . 1 1021 Primary Pumps ATPases(2) AT1G10130 80.4 0.0e+00 1590.9
Lsi02g01380 . 1 1098 Primary Pumps ATPases(2) AT1G07670 77.8 0.0e+00 1651.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004869 2 1 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 3 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi02g01380 Lsi_Chr02 FPKM 10.781226 11.645488 17.580978 17.013517 13.766523 13.712208 14.38125 15.070934 13.309526 12.959152