Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01429 ATGGCGGGCGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCTGTTGCCGTTGTTTGTTTCGTTTTACTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTTATCGGACATTGGCTTAAGAAGAGACATAAACGGGCATTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCACAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAATGGAGATGAACAAAGAGATGGAAAAAGCTGTTGAACATTTGGCTACTAATGGCCGGAGACTCCTCCATCTTGCCGGAACTGGTGGAAGTTTCCGGCGGATTTTGGCTGCCGCTGGAGGAGCCGACAAGTGTGCTGCCAAGGGTCAAGTGTCATTTATTTCAGCAGAAGGAATTCATCAACTTCACATTTTCATATTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTAACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCAGAATACCAATTCTCACATGATCCAGAGAGATTTAGGTTTGCAAGAGACACCTCGTTTGGGAGAAGACATTTGAGCTTCTGGACTAAGAATCCTGCCCTAATGTGGATAGTTTGTTTCTTCAGGCAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGATTTATAATGGCACATTTAGCACCTCAGAGTCATACACAGTTTGATTTTCAAAAATACATTAATAGATCCCTTGAAGAAGACTTTAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTCGCTGTGCTGTTCCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCACTAATAATTTTGCTGCTGATCGGTACAAAATTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGAGAAGTGGTGAAGGGCGTACCAGTGGTGGAGCCTGGCGATGACCTTTTTTGGTTCAATCGCCCTCGCCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCCTTCTTTGCTTGGACTTGGTATGAGTTCGGGTTGAATTCTTGTTTCCATGAGCATATAGAGGATGTGGTGATCAGAATTTCAATGGGGGTGCTAGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTGGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAACGAGAGAGTGGCAGCGGCCCTTCGCAATTGGTATCACTCGGCTCGGAAGCACATCAAACACAACCGCGGTTCGATCACTCCAATGTCGAGCCGACCCGCCACCCCAACTCACAACATGTCCCCGGTTCACCTACTCCGTCACTACAGGAGTGAGGTCGATAGCTTCCACACCTCGCCGAGAAGGTCACCATTCGAGACCGACCGTTGGGACAACGATTCACCATCACCGTCCCGTCATGCTGATGGTTCGTCTTCGTCACAACCCTACGTCGAGATGGGAGGCTATGACAAAGATCCGATCGAATTGGGTTCAACTCAAGTTGATTTTGTTCAATCATCTCAACCCCGCACTCAACATGAGATTCAAATTGGCGGCCCTAAAGACTTTTCCTTTAATAGAGTTGAGTGA 1749 44.94 MAGAAGGKSLEQTPTWAVAVVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKEMEMNKEMEKAVEHLATNGRRLLHLAGTGGSFRRILAAAGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHIEDVVIRISMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPATPTHNMSPVHLLRHYRSEVDSFHTSPRRSPFETDRWDNDSPSPSRHADGSSSSQPYVEMGGYDKDPIELGSTQVDFVQSSQPRTQHEIQIGGPKDFSFNRVE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19828608 19841227 - Lsi02G014290.1 Lsi02g01429 656171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01429 582 MobiDBLite consensus disorder prediction 523 537 - -
Lsi02g01429 582 MobiDBLite consensus disorder prediction 502 582 - -
Lsi02g01429 582 Pfam Mlo family 8 495 IPR004326 GO:0006952|GO:0016021
Lsi02g01429 582 MobiDBLite consensus disorder prediction 552 567 - -
Lsi02g01429 582 MobiDBLite consensus disorder prediction 502 522 - -
Lsi02g01429 582 PANTHER MLO-LIKE PROTEIN 1 1 579 IPR004326 GO:0006952|GO:0016021
Lsi02g01429 582 Coils Coil 97 117 - -
Lsi02g01429 582 PANTHER MLO-LIKE PROTEIN 1 579 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01429 Lsi-Chr2:19828608 Lsi08g00776 Lsi-Chr8:16142106 7.03E-122 dispersed
Lsi02g01429 Lsi-Chr2:19828608 Lsi02g01432 Lsi-Chr2:19938652 1.11E-173 proximal
Lsi01g00280 Lsi-Chr1:2491688 Lsi02g01429 Lsi-Chr2:19828608 2.56E-83 transposed
Lsi04g00059 Lsi-Chr4:739689 Lsi02g01429 Lsi-Chr2:19828608 0 transposed
Lsi07g01039 Lsi-Chr7:15744283 Lsi02g01429 Lsi-Chr2:19828608 1.75E-117 transposed
Lsi09g01887 Lsi-Chr9:27665414 Lsi02g01429 Lsi-Chr2:19828608 3.33E-111 transposed
Lsi10g00757 Lsi-Chr10:10378636 Lsi02g01429 Lsi-Chr2:19828608 4.37E-95 transposed
Lsi10g01281 Lsi-Chr10:17031805 Lsi02g01429 Lsi-Chr2:19828608 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01429 K08472 - csv:101217225 1090.49