Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01455 ATGGTTGTAGCAGCATGGCCGAGCTCCAATGGCGGAATTGGGAGTGGAGAATTGGCCAATTTTGTCCAACAAGTGGTGGTCGGACGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAACGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTCGGCGTTATTGCCGGACTTATGGCGGAGGTGGCGCCCACTTGGTTCGTTCTTCTCATCGGCGCCGCCTTTAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTTACCGGAAAAATTGTCCGCCCCACCGTCGCCTACTTTTGCTTTTACATTATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACGGGAGTGCTTGTCACGTGCGTGAAGAACTTTCCAGAAAGAAGAGGAGTAATGTTGGGCCTTCTAAAGGGCTTCGTGGGCCTAAGCGGAGCTATCATGACCCAACTTTACATCGCCATTTACGGCCACGATACCAAATCTCTTGTTCTTCTAATCGCTTGGTTTCCTTCCATAATCTCCTTGATTTTCGTCTACACAATCAGAGAAATCAAAGTCCTTAAACACCCAAATGAATTCAGAGTTTTCGTTCAATTCCTTTGCGTTACAATCCTTCTAGCCATCTTCCTCACCGTCTTAATCTTCGTTCAAAAACGAGTCCGATTCGACCAATCCGCTCATATCGCCATTGTCTCTGCCATTTTTGCTCTGCTTTTTGTTCCATTGTTAATCGCCATTAGAGAAGAATTCCTTCTCTGGAATCTCAACAAACGAACCATTATTACAAACCCTTTCACCAGAATCAGAATCGAAAACAACCCCCAAACAACAACAACCCCAATTCCTTCTTCAAATCAAACTCAACCCACTTCTTGTTTCGCTAACATTTTCAACAAACCCGAAAGAGGCGAAGATTACACAGTTCTTCAAGCCATTTTCAGTATCGATATGCTTATTTTATGCTCCACTATGTTAATCGGCGTCGGTGCAAGCTTAACCGCCATTGACAATCTAGGTCAAATCGGTGAAGCTCAAGGCTACCCATCTGAAACAATCAACTCATTCATCTCTTTAGTAAGTATTTTCAACTTCACTGGCAGAATCTTTTCTGGGTTTGTCTCGGAAATCTTGCTTGAAAAATTCAAATTCCCTCGGCCGTTGATGCTCACATTAATCCTCTTGATTTCCTGTATTGGGCATCTTTTAGTAGCCTTCCCCTTTGAAGATTCGCTCTATGTTGCTTCAATCATAATTGGATTTTCAATGGGTTCTCAAGTTCCATTGCATTTCGCGATGATTTCAGAGATTTTTGGGCTGAAACATTACTCGACGTTGTTTAATTTTGGGCAACTGTCTTGTCCAGTTGGGTCTTATATTCTGAATGTGATGGTGACTGGGAAGCTGTATGATAAGGATAAATGCAAACTGGTTGAGAAAGAATCTAAACAGGCAAAGAAGAAAAAGAACTATGATTCAGATGATGATGATTTTGGCAAAGAGGCTGTGGTGTCCAAAGTTGTTGATGATTGCCAAAATAAGATGAATCAATTGGGAGGTGAGGAAGATACATCCATATGGGGGTTAAACGTTTTTGGAGAACAGAAACCCTCGCCAAGTTTACAAAGTCCTGAACTTGAAAGTTGCCACTTTTTGCAAACATTCCTAAATAATGAAGTTAATTCTTTGGTGAATCTCACTGTGGAGAAAGGTGATGCGTTCCTTGAAGGTTTATTGGTAAATGGTTGGCTGTCAACACTTGTTTCTTTGACAGGTCGTGCAGAAAAATCACTTGCCATATGGACTTTCAATTTAATGTTATATTCATCAAGAGAAGATCTAAGAACATCAGCTTGTGATTTCTGGAGGGATATAATGTTAATGACAAATGAGGTTGAGCAACAGCATCTTCAAATTGATTGGTTTCCAAACTATGCTCAGTTAGGAGAAGCTCTTGAGACTTATGGATATAGATTTGAATGCTCATTAAACCCTGGATTCATCCACACTGGTTCTGGACGTGGAGGGCCACCTCAGAATATAAGGGCTTGGATCAAGTTTATTACTACTTGTTGTCAAACAAAGATTAAAAAGAATATATTTACATCCTCTGAAGTTGAGCGGCTAGCTGAAGCCATTATTTGTTTATTTCTGGACCGCCAGTTTCAAGGCATAACCGTGCTCTTATGTGAATGCCTGCAATCACTTGTCCATTACTTCACAGATGAAGAATGGAAGGCATGTTGTGAGAAAATAGCGAAATCTCTTGTCTGCAGAATTCCTATGGATCTAAACTGTTTGCGAGCTGTGGAATGCATTTCTGGAGTTGATCCCCGTAGTAAATATCTGAGGAGTACAGTTGCCTACCAAATTCTTCTTATTTTCTTTAAAAACGAGGCTACTAATGAAGGAGAGGTTTTGAGATTACTTACTTCCATTACCGTGAAAGACAAAAGTTGTGACCTATTTAAGCTATACATTTACTTGGTGTTGACGGAAAACTGGCTCGTCGGTAGTCGAACACTAGAAGGCAAACCGCTAATATGTGAAATGTGGGGTCTGTTTCTCAGAAACTGCTCCTGCCAAATCGCCAGTACCGATTTGAGGTCATATGCATCAAAGGTTCGTAACAAAGCTTCATATATCTTGCAAAGCGCTTTTGACGAATAG 2751 41.15 MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYFCFYIMVGANSQNFANTGVLVTCVKNFPERRGVMLGLLKGFVGLSGAIMTQLYIAIYGHDTKSLVLLIAWFPSIISLIFVYTIREIKVLKHPNEFRVFVQFLCVTILLAIFLTVLIFVQKRVRFDQSAHIAIVSAIFALLFVPLLIAIREEFLLWNLNKRTIITNPFTRIRIENNPQTTTTPIPSSNQTQPTSCFANIFNKPERGEDYTVLQAIFSIDMLILCSTMLIGVGASLTAIDNLGQIGEAQGYPSETINSFISLVSIFNFTGRIFSGFVSEILLEKFKFPRPLMLTLILLISCIGHLLVAFPFEDSLYVASIIIGFSMGSQVPLHFAMISEIFGLKHYSTLFNFGQLSCPVGSYILNVMVTGKLYDKDKCKLVEKESKQAKKKKNYDSDDDDFGKEAVVSKVVDDCQNKMNQLGGEEDTSIWGLNVFGEQKPSPSLQSPELESCHFLQTFLNNEVNSLVNLTVEKGDAFLEGLLVNGWLSTLVSLTGRAEKSLAIWTFNLMLYSSREDLRTSACDFWRDIMLMTNEVEQQHLQIDWFPNYAQLGEALETYGYRFECSLNPGFIHTGSGRGGPPQNIRAWIKFITTCCQTKIKKNIFTSSEVERLAEAIICLFLDRQFQGITVLLCECLQSLVHYFTDEEWKACCEKIAKSLVCRIPMDLNCLRAVECISGVDPRSKYLRSTVAYQILLIFFKNEATNEGEVLRLLTSITVKDKSCDLFKLYIYLVLTENWLVGSRTLEGKPLICEMWGLFLRNCSCQIASTDLRSYASKVRNKASYILQSAFDE 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20235090 20253808 - Lsi02G014550.1 Lsi02g01455 656197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01455 916 Pfam Nodulin-like 29 274 IPR010658 -
Lsi02g01455 916 Gene3D MFS general substrate transporter like domains 338 499 IPR036259 -
Lsi02g01455 916 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 14 515 - -
Lsi02g01455 916 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 515 - -
Lsi02g01455 916 SUPERFAMILY MFS general substrate transporter 33 491 IPR036259 -
Lsi02g01455 916 CDD MFS_Mch1p_like 28 501 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01455 Lsi-Chr2:20235090 Lsi03g00141 Lsi-Chr3:2026021 0 dispersed
Lsi02g01455 Lsi-Chr2:20235090 Lsi04g00096 Lsi-Chr4:1102253 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01455 - - csv:101202941 871.307