Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01491 ATGGCGGAACCAGTAGCAGAGCCTAAGTCATTACCCGAACCCGAAAAGAAGAAGGAACAGAGCCTTCCTTTTCACCAACTCTTCTCTTTTGCAGACAAATATGACTGGTTTCTCATGATCCTCGGTAGTTTCGGCGCCATTGTCCACGGCTCTTCCATGCCTGTTTTCTTCCTTCTTTTCGGCGAAATGGTTAACGGCTTCGGCAAAAACCAATCCAATTTTCACAAAATGACAGCAGAAGTCTCTAAGTATGCTCTGTATTTTGTCTACTTGGGTCTTATTGTCTGTTTCTCATCATACGCCGAGATCGCATGTTGGATGTACACTGGGGAGAGACAAGTGAGCACATTGAGAAAGAAGTATTTAGAAGCTGTTTTGAAACAAGATGTTGGATTCTTTGACACTGATGCCAGAACAGGGGATGTTGTTTTCAGCGTTTCAACAGACACTCTTCTTGTACAAGATGCAATCAGCGAGAAGGTGGGCAACTTCATTCACTATCTTTCGACGTTTTTGGCTGGATTGGTGGTGGGTTTTGTGTCAGCATGGAGACTAGCTCTTCTGAGTATAGCAGTAATTCCAGGAATCGCTTTCGCTGGAGGTTTATATGCTTATACTCTCACTGGACTTACTTCAAAGAGCCGAGAATCCTATGCCAACGCTGGCATAATCGCCGAACAGGCGATTGCTCAAGTTCGAACTGTTTACTCTTATGTTGGAGAAAGCAAAGCTTTGAATTCCTATTCAGATTCAATTCAAAACACATTGAAAATTGGATACAAGGCAGGAATGGCTAAGGGGTTGGGTCTAGGTTGTACCTATGGCATTGCTTGTATGTCTTGGGCACTTGTCTTCTGGTATGCTGGAGTCTTCATCCGAAACGGCCAATCCGATGGCGGCAAAGCCTTCACTGCTATATTCTCCGCCATCGTTGGTGGCATGAGCTTGGGGCAGTCATTTTCCAATTTGGGAGCATTCAGCAAAGGGAAAGCAGCAGGGTACAAATTGATGGAGATTATCAAACAGAGGCCTACAATTATTCAAGACCCATTAGAAGGGAAGTGTTTGGCTGAAGTTAATGGCAACATTGAGTTCAAAGATGTTACCTTTAGCTATCCGTCCAGACCGGACGTGATGATCTTTAGGGATTTCTCCATTTTCTTCCCAGCCGGGAAAACGGTGGCTGTCGTCGGCGGTAGCGGTTCCGGGAAAAGCACTGTTGTCTCTCTCATTGAAAGATTCTACGATCCCAATCAAGGGCAGGTTTTACTTGACAATGTGGATATCAAGACACTGCAATTGAAATGGCTGCGTGATCAAATTGGTTTAGTGAATCAGGAACCGGCTCTGTTTGCAACCACCATATACGAAAACATTCTCTACGGCAAACCTGATGCGACGACGGCGGAGGTGGAAGCTGCCGCGGCTGCAGCAAACGCTCATAGCTTCATCGCATTGCTTCCCAATGGCTACGACACCCAAGTGGGCGAAAGAGGATTACAACTCTCCGGTGGACAAAAACAGAGGATTGCCATAGCCAGAGCAATGTTGAAGAACCCCAAAATCCTTCTCCTCGATGAAGCCACCAGCGCGCTCGATGCAGGCTCTGAGAGCATAGTTCAAGAAGCTTTAGACCGTTTAATGGTCGGAAGAACAACGGTGGTGGTCGCACATCGATTATCAACCATAAGAAATGTTGATTCAATTGCAGTTATTCAACAGGGGCAGGTCGTCGAAACAGGAACTCACGAAGAATTAATAGCGAAATCCGGTGCTTATTCCTCGTTAATTCGATTCCAAGAAATGGTTCGAAACAGAGAATTCTCAAACCCATCGACCCGTCGAACACGATCTTCACGGCTGAGCCATTCGTTATCCACAAAATCGTTAAGCCTCCGCTCCGGCAGCCTCAGGAATTTGAGTTATTCGTATAGCACCGGCGCCGACGGGAGAATCGAAATGGTTTCTAACGCCGAAACTGACCGAAAAAACCCAGCCCCAGATGGCTATTTCATTCGTCTTCTTAAACTAAACGGCCCCGAATGGCCGTATTCGATAATGGGGGCTGTTGGGTCTGTTCTCTCTGGTTTCATCAGTCCAACATTTGCCATTGTTATGAGTAACATGATCGAGGTCTTCTATTACAGAAATTCATCCGCCATGGAAAGGAAAATCAAGGAATTCGTATTCATCTACATTGGAATTGGGGTTTACGCAGTGGTAGCTTATCTAATTCAGCATTATTTCTTTACAATCATGGGTGAAAATCTCACTACTAGAGTCAGAAGAATGATGCTCGCAGCGATTTTGAGGAATGAAGTGGGATGGTTCGATGAAGAAGAACACAACTCAAGTTTAGTAGCAGCAAGGTTGGCTACTGATGCAGCTGATGTAAAATCCGCCATTGCTGAAAGAATATCAGTGATACTACAAAATATGACTTCACTCTTCACTTCTTTCATAGTTGCATTCATTGTTGAATGGAGAGTTTCTCTTCTCATCCTTGCAGCCTTCCCTCTACTGGTTCTTGCCAACATGGCTCAGCAACTTTCTTTGAAAGGATTTGCTGGGGATACTGCTAAGGCCCACGCAAAGACAAGTATGATTGCAGGGGAAGGTGTGAGCAATATCAGAACAGTGGCTGCCTTCAATGCTCAGGACAAGATCCTATCTCTGTTCCGCCAGGAGCTTTGTGTCCCACAACGACAGAGTCTCCGCCGGAGCCAAACGGCGGGGGTCCTTTTCGGTATCTCGCAGCTAGCTCTATATGCCTCTGAAGCTCTAGTTCTATGGTATGGTGTCCATTTGGTCAGCAATGGTGGATCAACATTCTCCAAAGTGATCAAAGTCTTTGTTGTCTTGGTTGTTACTGCCAATTCTGTGGCCGAGACTGTTAGTCTTGCTCCTGAGATCATTAGGGGCGGCGAATCAATCGGTTCTGTTTTCTCGATTCTCGATCGCTCGACAAGGATTGACCCTGATGATCCTGAGGCAGAGACTGTTGAGACGCTTCGTGGGGAAATTGAACTCCGACATGTCGATTTCGCATACCCATCTCGACCTGATGTCATGGTGTTTAAGGATCTCAATTTGAGGATCAGGGCAGGTCAGAGTCAGGCATTGGTTGGAGCCAGTGGATCAGGGAAGAGTTCAGTGATTGCCTTGATTGAGAGATTCTACGATCCGCTTGCCGGGAAAGTTATGATCGACGGGAAGGACATTCGACGCCTAAACTTGCAATCCTTGAGGCTGAAAATTGGGTTGGTACAGCAAGAGCCAGCCTTATTTGCAGCCAGCATTTTTGACAACATTGCATATGGAAAAGATGGAGCAACAGAGGCAGAAGTAATAGAGGCAGCAAGAGCAGCCAATGTGCATGGCTTTGTAAGTGGACTGCCTGATGGCTACAAGACACCAGTTGGGGAAAGAGGCGTTCAACTCTCTGGTGGCCAAAAACAACGCATAGCTATTGCCAGAGCCGTTCTCAAGGACCCCACAATCCTCCTCCTCGACGAAGCCACCAGTGCCCTCGACGCTGAGTCCGAGTGCGTGCTGCAAGAAGCTCTCGAAAGGCTCATGAGGGGCCGAACCACAGTAGTCGTGGCACATCGCCTGTCCACAATCAGGGGTCTGGACTGCATTGGCGTGGTCCAAGACGGGCGCATTGTCGAGCAAGGCAGCCACAACGAGCTGCTAAGCCGAGCCGAGGGAGCTTACTCAAGGCTCTTGCAGCTGCAACACCAACACATATGA 3753 47.16 MAEPVAEPKSLPEPEKKKEQSLPFHQLFSFADKYDWFLMILGSFGAIVHGSSMPVFFLLFGEMVNGFGKNQSNFHKMTAEVSKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDVVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDSIQNTLKIGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQSDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQRPTIIQDPLEGKCLAEVNGNIEFKDVTFSYPSRPDVMIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTIYENILYGKPDATTAEVEAAAAAANAHSFIALLPNGYDTQVGERGLQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYSSLIRFQEMVRNREFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFIRLLKLNGPEWPYSIMGAVGSVLSGFISPTFAIVMSNMIEVFYYRNSSAMERKIKEFVFIYIGIGVYAVVAYLIQHYFFTIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLFTSFIVAFIVEWRVSLLILAAFPLLVLANMAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKILSLFRQELCVPQRQSLRRSQTAGVLFGISQLALYASEALVLWYGVHLVSNGGSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESIGSVFSILDRSTRIDPDDPEAETVETLRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPLAGKVMIDGKDIRRLNLQSLRLKIGLVQQEPALFAASIFDNIAYGKDGATEAEVIEAARAANVHGFVSGLPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGLDCIGVVQDGRIVEQGSHNELLSRAEGAYSRLLQLQHQHI 1250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20679307 20686179 + Lsi02G014910.1 Lsi02g01491 656233

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01491 1250 CDD ABC_MTABC3_MDL1_MDL2 363 600 - -
Lsi02g01491 1250 SMART AAA_5 390 582 IPR003593 -
Lsi02g01491 1250 SMART AAA_5 1035 1221 IPR003593 -
Lsi02g01491 1250 CDD ABC_MTABC3_MDL1_MDL2 1008 1246 - -
Lsi02g01491 1250 Gene3D ABC transporter type 1, transmembrane domain 86 982 IPR036640 GO:0005524|GO:0016021
Lsi02g01491 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1246 IPR027417 -
Lsi02g01491 1250 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524
Lsi02g01491 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 600 IPR027417 -
Lsi02g01491 1250 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 991 - -
Lsi02g01491 1250 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 336 - -
Lsi02g01491 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1244 IPR003439 GO:0005524
Lsi02g01491 1250 Gene3D - 361 624 IPR027417 -
Lsi02g01491 1250 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 15 1248 - -
Lsi02g01491 1250 SUPERFAMILY ABC transporter transmembrane region 27 344 IPR036640 GO:0005524|GO:0016021
Lsi02g01491 1250 Pfam ABC transporter transmembrane region 686 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lsi02g01491 1250 Pfam ABC transporter transmembrane region 39 313 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lsi02g01491 1250 SUPERFAMILY ABC transporter transmembrane region 673 987 IPR036640 GO:0005524|GO:0016021
Lsi02g01491 1250 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524
Lsi02g01491 1250 Gene3D - 998 1250 IPR027417 -
Lsi02g01491 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Lsi02g01491 1250 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524
Lsi02g01491 1250 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 15 1248 IPR039421 -
Lsi02g01491 1250 Pfam ABC transporter 383 530 IPR003439 GO:0005524
Lsi02g01491 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 328 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lsi02g01491 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 973 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01491 K05658 ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] - csv:101212585 2265.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00130 Lsi-Chr2:1049488 Lsi02g01491 Lsi-Chr2:20679307 5.58E-99 dispersed
Lsi02g01491 Lsi-Chr2:20679307 Lsi03g02007 Lsi-Chr3:31464738 0 dispersed
Lsi02g01673 Lsi-Chr2:22511988 Lsi02g01491 Lsi-Chr2:20679307 8.49E-84 dispersed
Lsi10g00191 Lsi-Chr10:3188657 Lsi02g01491 Lsi-Chr2:20679307 2.21E-13 dispersed
Lsi02g01491 Lsi-Chr2:20679307 Lsi04g01761 Lsi-Chr4:24854240 3.48E-125 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi08g00928 . 644 935 Calmodulin-binding Proteins AT1G22070 56.2 2.6e-82 302.8
Lsi04g00016 . 86 384 Calmodulin-binding Proteins AT1G22070 55.4 3.2e-80 295.8
Lsi08g00395 . 185 467 Calmodulin-binding Proteins AT1G22070 56.6 1.7e-78 290.0
Lsi03g00453 . 28 334 Calmodulin-binding Proteins AT1G22070 52.3 6.9e-75 278.1
Lsi03g01716 . 226 514 Calmodulin-binding Proteins AT1G22070 53.3 5.8e-74 275.0
Lsi07g00186 . 1 367 Calmodulin-binding Proteins AT5G65210 54.3 2.9e-107 385.6
Lsi08g00928 . 653 935 Calmodulin-binding Proteins AT5G65210 55.6 2.5e-82 302.8
Lsi03g00453 . 29 334 Calmodulin-binding Proteins AT5G65210 53.4 8.0e-81 297.7
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT5G65210 55.7 1.5e-79 293.5
Lsi08g00928 . 660 935 Calmodulin-binding Proteins AT1G77920 59.6 6.1e-81 298.1
Lsi03g00453 . 30 334 Calmodulin-binding Proteins AT1G77920 54.3 1.2e-79 293.9
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT1G77920 57.0 1.1e-77 287.3
Lsi08g00395 . 182 467 Calmodulin-binding Proteins AT1G77920 54.9 7.8e-76 281.2
Lsi03g01716 . 223 514 Calmodulin-binding Proteins AT1G77920 51.7 1.6e-73 273.5
Lsi07g00186 . 1 367 Calmodulin-binding Proteins AT5G10030 54.4 1.0e-104 377.1
Lsi08g00395 . 131 467 Calmodulin-binding Proteins AT5G10030 52.2 9.7e-87 317.4
Lsi08g00928 . 660 935 Calmodulin-binding Proteins AT5G10030 59.3 1.6e-86 316.6
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT5G10030 57.6 1.9e-82 303.1
Lsi03g01716 . 220 514 Calmodulin-binding Proteins AT5G10030 51.5 1.1e-77 287.3
Lsi03g00453 . 29 334 Calmodulin-binding Proteins AT5G10030 52.7 1.2e-76 283.9
Lsi08g00928 . 644 935 Calmodulin-binding Proteins AT1G22070 56.2 2.6e-82 302.8
Lsi04g00016 . 86 384 Calmodulin-binding Proteins AT1G22070 55.4 3.2e-80 295.8
Lsi08g00395 . 185 467 Calmodulin-binding Proteins AT1G22070 56.6 1.7e-78 290.0
Lsi03g00453 . 28 334 Calmodulin-binding Proteins AT1G22070 52.3 6.9e-75 278.1
Lsi03g01716 . 226 514 Calmodulin-binding Proteins AT1G22070 53.3 5.8e-74 275.0
Lsi07g00186 . 1 367 Calmodulin-binding Proteins AT5G65210 54.3 2.9e-107 385.6
Lsi08g00928 . 653 935 Calmodulin-binding Proteins AT5G65210 55.6 2.5e-82 302.8
Lsi03g00453 . 29 334 Calmodulin-binding Proteins AT5G65210 53.4 8.0e-81 297.7
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT5G65210 55.7 1.5e-79 293.5
Lsi08g00928 . 660 935 Calmodulin-binding Proteins AT1G77920 59.6 6.1e-81 298.1
Lsi03g00453 . 30 334 Calmodulin-binding Proteins AT1G77920 54.3 1.2e-79 293.9
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT1G77920 57.0 1.1e-77 287.3
Lsi08g00395 . 182 467 Calmodulin-binding Proteins AT1G77920 54.9 7.8e-76 281.2
Lsi03g01716 . 223 514 Calmodulin-binding Proteins AT1G77920 51.7 1.6e-73 273.5
Lsi07g00186 . 1 367 Calmodulin-binding Proteins AT5G10030 54.4 1.0e-104 377.1
Lsi08g00395 . 131 467 Calmodulin-binding Proteins AT5G10030 52.2 9.7e-87 317.4
Lsi08g00928 . 660 935 Calmodulin-binding Proteins AT5G10030 59.3 1.6e-86 316.6
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT5G10030 57.6 1.9e-82 303.1
Lsi03g01716 . 220 514 Calmodulin-binding Proteins AT5G10030 51.5 1.1e-77 287.3
Lsi03g00453 . 29 334 Calmodulin-binding Proteins AT5G10030 52.7 1.2e-76 283.9
Lsi01g01158 . 1 142 Calmodulin-binding Proteins AT5G64040 61.8 1.5e-40 162.9
Lsi07g01033 . 36 1260 Calmodulin-binding Proteins AT5G65930 73.9 0.0e+00 1729.5
Lsi03g00721 . 1 1031 Calmodulin-binding Proteins AT3G56690 55.0 2.1e-280 962.2
Lsi03g00011 . 1 231 Calmodulin-binding Proteins AT1G08110 71.5 1.7e-92 335.9
Lsi01g01658 . 359 855 Calmodulin-binding Proteins AT3G04080 57.9 7.2e-151 530.8
Lsi03g02007 . 89 1355 Calmodulin-binding Proteins AT2G36910 88.5 0.0e+00 2173.3
Lsi02g01491 . 13 1246 Calmodulin-binding Proteins AT2G36910 53.7 0.0e+00 1289.6
Lsi09g00568 . 444 686 Calmodulin-binding Proteins AT2G36910 52.2 3.9e-66 250.8
Lsi07g01035 . 50 351 Calmodulin-binding Proteins AT5G63870 71.6 2.1e-132 468.8
Lsi02g01656 . 362 644 Calmodulin-binding Proteins AT5G63870 53.1 4.7e-87 318.2
Lsi04g02213 . 5 169 Calmodulin-binding Proteins AT4G31320 52.4 4.5e-43 171.4
Lsi04g02213 . 5 169 Calmodulin-binding Proteins AT2G24400 53.9 8.8e-41 163.7
Lsi04g01728 . 5 150 Calmodulin-binding Proteins AT4G34750 54.2 1.5e-38 156.0
Lsi06g01525 . 21 278 Calmodulin-binding Proteins AT5G62570 59.7 1.2e-87 320.5
Lsi06g01124 . 12 701 Calmodulin-binding Proteins AT5G57580 61.7 7.4e-231 797.0
Lsi06g01124 . 4 701 Calmodulin-binding Proteins AT2G18750 58.2 8.4e-208 720.3
Lsi06g01124 . 17 700 Calmodulin-binding Proteins AT4G25800 60.8 8.4e-213 736.9
Lsi06g01525 . 21 277 Calmodulin-binding Proteins AT4G25800 56.4 5.1e-77 285.8
Lsi06g01525 . 21 277 Calmodulin-binding Proteins AT2G24300 52.1 8.8e-69 258.5
Lsi07g00089 . 42 333 Calmodulin-binding Proteins AT3G59220 66.3 2.1e-108 389.0
Lsi02g01863 CCT 13 311 Calmodulin-binding Proteins AT3G59220 53.2 4.0e-88 321.6
Lsi05g00531 CCT 13 134 Calmodulin-binding Proteins AT3G59220 61.5 3.8e-38 155.6
Lsi07g00089 . 68 338 Calmodulin-binding Proteins AT3G59260 64.1 2.2e-96 349.0
Lsi02g01863 CCT 31 316 Calmodulin-binding Proteins AT3G59260 52.8 1.4e-82 303.1
Lsi02g01863 CCT 76 323 Calmodulin-binding Proteins AT1G50590 57.3 2.5e-75 278.9
Lsi07g00089 . 120 338 Calmodulin-binding Proteins AT1G50590 57.9 3.9e-73 271.6
Lsi04g01901 . 15 689 Calmodulin-binding Proteins AT2G43040 72.8 2.2e-289 991.5
Lsi08g01530 . 1 711 Calmodulin-binding Proteins AT1G27460 59.0 2.4e-232 802.0
Lsi05g01037 . 27 870 Calmodulin-binding Proteins AT4G28600 50.2 1.3e-210 729.9
Lsi05g01751 . 112 827 Calmodulin-binding Proteins AT4G28600 53.0 2.8e-202 702.2
Lsi09g00733 . 455 927 Calmodulin-binding Proteins AT5G17330 81.1 1.2e-233 805.8
Lsi02g00023 . 1 504 Calmodulin-binding Proteins AT5G17330 73.6 5.6e-218 753.8
Lsi09g00732 . 1 407 Calmodulin-binding Proteins AT5G17330 83.6 2.1e-204 708.8
Lsi09g00733 . 577 927 Calmodulin-binding Proteins AT1G65960 79.9 4.7e-166 580.9
Lsi02g00023 . 130 504 Calmodulin-binding Proteins AT1G65960 74.3 2.3e-157 552.0
Lsi09g00732 . 131 378 Calmodulin-binding Proteins AT1G65960 89.1 7.6e-132 467.2
Lsi09g00904 . 69 230 Calmodulin-binding Proteins AT1G65960 68.5 1.4e-56 217.2
Lsi09g00733 . 455 927 Calmodulin-binding Proteins AT2G02010 83.1 1.2e-237 819.3
Lsi02g00023 . 1 505 Calmodulin-binding Proteins AT2G02010 74.2 5.8e-221 763.8
Lsi09g00732 . 1 378 Calmodulin-binding Proteins AT2G02010 89.2 4.2e-203 704.5
Lsi02g00023 . 1 505 Calmodulin-binding Proteins AT3G17760 75.9 2.7e-225 778.1
Lsi09g00733 . 452 927 Calmodulin-binding Proteins AT3G17760 74.5 1.2e-220 762.7
Lsi09g00732 . 1 392 Calmodulin-binding Proteins AT3G17760 80.5 2.0e-191 665.6
Lsi09g00733 . 452 926 Calmodulin-binding Proteins AT2G02000 79.8 7.0e-229 790.0
Lsi02g00023 . 1 503 Calmodulin-binding Proteins AT2G02000 72.1 5.4e-213 737.3
Lsi09g00732 . 1 378 Calmodulin-binding Proteins AT2G02000 84.9 6.2e-193 670.6
Lsi05g01082 . 221 370 Calmodulin-binding Proteins AT2G22960 51.3 1.5e-43 172.9
Lsi04g01471 . 268 424 Calmodulin-binding Proteins AT2G22960 51.0 5.7e-43 171.0
Lsi04g01473 . 311 422 Calmodulin-binding Proteins AT2G22960 61.6 1.5e-40 162.9
Lsi04g01474 . 328 475 Calmodulin-binding Proteins AT2G22960 53.5 2.0e-40 162.5
Lsi02g02135 . 1 578 Calmodulin-binding Proteins AT3G25230 62.2 5.5e-198 687.6
Lsi05g01354 . 17 520 Calmodulin-binding Proteins AT3G25230 64.1 3.7e-186 648.3
Lsi05g01354 . 8 540 Calmodulin-binding Proteins AT5G48570 64.1 2.4e-196 682.2
Lsi02g02135 . 16 575 Calmodulin-binding Proteins AT5G48570 62.4 3.2e-193 671.8
Lsi08g00928 . 644 935 Calmodulin-binding Proteins AT1G22070 56.2 2.6e-82 302.8
Lsi04g00016 . 86 384 Calmodulin-binding Proteins AT1G22070 55.4 3.2e-80 295.8
Lsi08g00395 . 185 467 Calmodulin-binding Proteins AT1G22070 56.6 1.7e-78 290.0
Lsi03g00453 . 28 334 Calmodulin-binding Proteins AT1G22070 52.3 6.9e-75 278.1
Lsi03g01716 . 226 514 Calmodulin-binding Proteins AT1G22070 53.3 5.8e-74 275.0
Lsi08g00928 . 660 935 Calmodulin-binding Proteins AT1G77920 59.6 6.1e-81 298.1
Lsi03g00453 . 30 334 Calmodulin-binding Proteins AT1G77920 54.3 1.2e-79 293.9
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT1G77920 57.0 1.1e-77 287.3
Lsi08g00395 . 182 467 Calmodulin-binding Proteins AT1G77920 54.9 7.8e-76 281.2
Lsi03g01716 . 223 514 Calmodulin-binding Proteins AT1G77920 51.7 1.6e-73 273.5
Lsi07g00186 . 1 367 Calmodulin-binding Proteins AT5G10030 54.4 1.0e-104 377.1
Lsi08g00395 . 131 467 Calmodulin-binding Proteins AT5G10030 52.2 9.7e-87 317.4
Lsi08g00928 . 660 935 Calmodulin-binding Proteins AT5G10030 59.3 1.6e-86 316.6
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT5G10030 57.6 1.9e-82 303.1
Lsi03g01716 . 220 514 Calmodulin-binding Proteins AT5G10030 51.5 1.1e-77 287.3
Lsi03g00453 . 29 334 Calmodulin-binding Proteins AT5G10030 52.7 1.2e-76 283.9
Lsi07g00186 . 1 367 Calmodulin-binding Proteins AT5G65210 54.3 2.9e-107 385.6
Lsi08g00928 . 653 935 Calmodulin-binding Proteins AT5G65210 55.6 2.5e-82 302.8
Lsi03g00453 . 29 334 Calmodulin-binding Proteins AT5G65210 53.4 8.0e-81 297.7
Lsi04g00016 . 99 384 Calmodulin-binding Proteins AT5G65210 55.7 1.5e-79 293.5
Lsi02g01657 . 1 652 Calmodulin-binding Proteins AT3G12580 92.0 0.0e+00 1170.2
Lsi01g01415 . 1 647 Calmodulin-binding Proteins AT3G12580 90.9 0.0e+00 1156.0
Lsi11g00825 . 1 650 Calmodulin-binding Proteins AT3G12580 85.5 0.0e+00 1087.0
Lsi09g00168 . 180 829 Calmodulin-binding Proteins AT3G12580 62.5 1.0e-227 786.6
Lsi02g01976 . 1 347 Calmodulin-binding Proteins AT3G12580 50.1 1.0e-86 318.2
Lsi02g01652 . 5 129 Calmodulin-binding Proteins AT3G12580 89.6 2.0e-58 224.2
Lsi01g01415 . 1 647 Calmodulin-binding Proteins AT5G02500 72.7 2.0e-250 861.7
Lsi02g01657 . 1 652 Calmodulin-binding Proteins AT5G02500 71.7 1.3e-249 859.0
Lsi11g00825 . 1 650 Calmodulin-binding Proteins AT5G02500 66.4 3.1e-227 784.6
Lsi03g00986 . 140 517 Calmodulin-binding Proteins AT5G02500 51.5 1.1e-99 360.9
Lsi02g01652 . 7 129 Calmodulin-binding Proteins AT5G02500 91.9 3.5e-58 223.0
Lsi01g01415 . 1 647 Calmodulin-binding Proteins AT3G09440 90.4 0.0e+00 1141.7
Lsi02g01657 . 1 652 Calmodulin-binding Proteins AT3G09440 89.3 0.0e+00 1139.0
Lsi11g00825 . 1 650 Calmodulin-binding Proteins AT3G09440 82.8 1.8e-309 1058.1
Lsi09g00168 . 180 824 Calmodulin-binding Proteins AT3G09440 63.5 1.4e-226 782.7
Lsi02g01652 . 7 129 Calmodulin-binding Proteins AT3G09440 92.7 1.2e-58 224.9
Lsi02g01657 . 1 652 Calmodulin-binding Proteins AT5G02490 89.5 0.0e+00 1141.3
Lsi01g01415 . 1 647 Calmodulin-binding Proteins AT5G02490 89.3 0.0e+00 1130.9
Lsi11g00825 . 1 650 Calmodulin-binding Proteins AT5G02490 82.9 1.4e-309 1058.5
Lsi09g00168 . 180 829 Calmodulin-binding Proteins AT5G02490 61.6 1.2e-225 779.6
Lsi02g01652 . 7 129 Calmodulin-binding Proteins AT5G02490 89.4 2.9e-57 220.3
Lsi11g00825 . 1 650 Calmodulin-binding Proteins AT1G16030 83.7 0.0e+00 1083.2
Lsi02g01657 . 1 652 Calmodulin-binding Proteins AT1G16030 84.0 4.4e-313 1070.1
Lsi01g01415 . 1 647 Calmodulin-binding Proteins AT1G16030 83.3 1.4e-309 1058.5
Lsi09g00168 . 176 829 Calmodulin-binding Proteins AT1G16030 61.9 7.1e-226 780.4
Lsi02g01652 . 7 129 Calmodulin-binding Proteins AT1G16030 85.4 3.5e-55 213.4
Lsi02g01657 . 1 619 Calmodulin-binding Proteins AT1G56410 87.4 1.2e-312 1068.5
Lsi01g01415 . 1 619 Calmodulin-binding Proteins AT1G56410 87.1 3.2e-308 1053.9
Lsi11g00825 . 1 619 Calmodulin-binding Proteins AT1G56410 81.9 2.8e-288 987.6
Lsi09g00168 . 180 813 Calmodulin-binding Proteins AT1G56410 61.0 1.1e-215 746.5
Lsi02g01652 . 7 129 Calmodulin-binding Proteins AT1G56410 90.2 1.8e-56 217.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007857 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi02g01491 Lsi_Chr02 FPKM 24.73642 22.699238 15.385398 14.479925 41.138767 44.579224 44.326614 4.609859 5.017412 3.936195