Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01502 ATGGGTGACAAGGATGAAGTTTTGGAAGCTGTTGTGAAGGAAGCTGTTGATTTGGAGAACGTTCCACTTGAAGAGGTTTTTCAGACGTTGAGATGTAATACAAATGGTTTGACAACAGAGGCGGCTCATGAGAGGTTGGCCATTTTTGGACACAACAAGCTTGAAGAAAAGAAGGAGAGTAAGGTTTTGAAGTTCTTGGGATTTATGTGGAACCCTCTCTCATGGGTCATGGAAGCTGCAGCTATAATGGCTATTGCTCTGGCTAATGGAGGAGGAAAACCTCCAGATTGGCAGGATTTTGTTGGGATCATAACCTTGTTAATTATCAATTCAACTATTAGTTTTATAGAGGAGAATAATGCTGGAAATGCTGCGGCTGCTCTCATGGCCCGTCTTGCTCCGAAAGCTAAGTCTGCTCTCACAGGCGAGTCACTTCCTGTGACTAAAGGCCCTGGGGACAGTGTCTATTCAGGTTCAACATGCAAACAGGGAGAAATTGAAGCAGTTGTTATTGCTACTGGTGTTCATACATTCTTTGGCAAAGCTGCTCATCTTGTAGACTCCACGAATCAAGTGGGTCACTTCCAAAAGGCACGAGTAGGCATTCAAGAGGTTCACTTCCTTCCATTCAACCCAACTGACAAGCGAACTGCCCTGACATACATTGATGCTGATGGTAAAATGCATCGAGTCAGCAAAGGTGCTCCAGAGCAAATCTTGAACCTTGCACACAACAAATCAGAGATAGAAAGAAGAGTTCATGCTGTGATCGATAAGTTCGCAGAACGAGGATTGCGCTCTCTTGCAGTGGCATACCAAGAAGTTCCAGATGGAAGAAAGGAGAGTCATGGAGGGCCATGGCAATTCATTGGCCTAATGCCTCTGTTTGACCCACCTAGACATGATAGTGCAGAGACAATTAGGAGGGCTTTGAATCTTGGTGTAAATGTTAAAATGATCACAGGTGATCAACTGGCTATAGGAAAGGAAACAGGACGTCGGCTCGGTATGGGAACAAATATGTACCCTTCATCTGCATTATTAGGACAGAACAAAGATGAATCAATTTCTGGATTGCCTGTTGATGACTTAATTGAGAAGGCTGATGGATTTGCCGGTGTATTTCCTGAGCACAAATATGAGATTGTGAAACGTTTACAAGCTCGGAAACATATATGTGGAATGACTGGAGATGGTGTTAATGATGCCCCTGCTCTTAAAAAGGCCGATATTGGCATAGCAGTTGCAGATGCAACCGATGCAGCTCGTAGTGCTTCTGACATTGTTCTTACAGAGCCTGGTCTTAGTGTTATTATAAGCGCTGTTCTAACCAGCAGAGCCATCTTCCAGAGGATGAAAAATTACACAATTTATGCAGTTTCAATTACAATTCGTATCGTGCTTGGATTCATGTTGCTGGCACTTATATATCAATTTGACTTCCCACCTTTCATGGTTCTAATCATTGCTATTCTTAATGATGGTACCATAATGACAATATCAAAGGATAGAGTGAAACCATCTCCTCTGCCAGATAGCTGGAAACTGGCAGAGATTTTTGGCACTGGAATTATACTTGGAGGTTATTTGGCTATGATGACCGTTATTTTCTTCTGGGCAGCTTACAGAACTGACTTCTTTCCTCGTACATTTGGGGTTTCTAGCCTTCAAAAGAAGGACGAGGATGATTTCAGAAAGCTAGCTTCAGCAATATACCTGCAAGTGAGTACAATTAGTCAGGCCCTCATCTTTGTGACACGATCTCGGAGTTGGTCGTTTGTGGAACGTCCTGGCCTGTTATTGGTTGCAGCTTTTGTTATTGCTCAGCTAATTGCTACAGTGATTGCTGTCTATGCAAACTGGAGTTTTGCTGCAATAGAAGGAATTGGCTGGGGCTGGGCTGGTGTGGTTTGGCTTTACAACCTCATCTTTTATTTCCCGCTTGATATAATCAAGTTTGCAATCAGATATGCCATTAGTGGTAGGGCATGGGACCTTGTCATTGAACAAAGGATTGCCTTTACAAGGAAGAAAGATTTTGGGAAGGAAGAGCGTGAGCTCAAATGGGCACATGCACAAAGGACACTTCATGGGCTGCAGCCACCTGAGTCTAAAATGTTCTCCGAGCGCACAACTTATACAGAACTCAATCAAATGGCAGAGGAAGCAAAACGACGAGCTGAAATTGCAAGGTAA 2196 43.4 MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNTNGLTTEAAHERLAIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKARVGIQEVHFLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESHGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESISGLPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIILGGYLAMMTVIFFWAAYRTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFVIAQLIATVIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDIIKFAIRYAISGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPESKMFSERTTYTELNQMAEEAKRRAEIAR 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20847413 20853447 - Lsi02G015020.1 Lsi02g01502 656244

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01502 731 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 658 IPR023298 -
Lsi02g01502 731 Gene3D - 711 731 - -
Lsi02g01502 731 PANTHER CALCIUM-TRANSPORTING ATPASE 137 197 - -
Lsi02g01502 731 SUPERFAMILY HAD-like 288 442 IPR036412 -
Lsi02g01502 731 Pfam haloacid dehalogenase-like hydrolase 226 410 - -
Lsi02g01502 731 SUPERFAMILY Calcium ATPase, transduction domain A 137 186 IPR008250 -
Lsi02g01502 731 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Lsi02g01502 731 Gene3D - 68 143 - -
Lsi02g01502 731 Gene3D - 398 658 - -
Lsi02g01502 731 PANTHER CALCIUM-TRANSPORTING ATPASE 3 137 - -
Lsi02g01502 731 Pfam E1-E2 ATPase 137 196 - -
Lsi02g01502 731 Gene3D - 162 296 IPR023299 GO:0000166
Lsi02g01502 731 PRINTS H+-transporting ATPase (proton pump) signature 253 271 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01502 731 PRINTS H+-transporting ATPase (proton pump) signature 427 452 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01502 731 PRINTS H+-transporting ATPase (proton pump) signature 396 412 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01502 731 PRINTS H+-transporting ATPase (proton pump) signature 572 593 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01502 731 PRINTS H+-transporting ATPase (proton pump) signature 368 384 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01502 731 PANTHER PLASMA MEMBRANE ATPASE 3 137 - -
Lsi02g01502 731 PANTHER PLASMA MEMBRANE ATPASE 137 197 - -
Lsi02g01502 731 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 371 479 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lsi02g01502 731 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Lsi02g01502 731 PANTHER CALCIUM-TRANSPORTING ATPASE 197 731 - -
Lsi02g01502 731 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 193 302 IPR023299 GO:0000166
Lsi02g01502 731 PANTHER PLASMA MEMBRANE ATPASE 197 731 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01502 K01535 PMA1, PMA2; H+-transporting ATPase [EC:7.1.2.1] - csv:101211115 998.808
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01502 Lsi-Chr2:20847413 Lsi07g00437 Lsi-Chr7:4655089 0 dispersed
Lsi02g00322 Lsi-Chr2:2742661 Lsi02g01502 Lsi-Chr2:20847413 0 wgd
Lsi02g01502 Lsi-Chr2:20847413 Lsi06g01491 Lsi-Chr6:25366643 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1470 . . . . . . . . . . . . . . Sed11g1984 . . Bhi06g00431 Tan11g0535 Cmetu09g1370 . Hepe02g3150 . Lcy10g1984 . . . . . . . . . . . Lsi02g01502 Csa05g02967 . . . . . . . . . . . Cmo04g02878 . Cma04g02750 . Car04g02647 . . . . . . . . . . Cla09g01799 Cam09g1889 Cec09g1953 Cco09g2045 . . Cre01g0618 . . Chy09g00272 Cme09g00295
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi09g01091 . 7 1194 Primary Pumps ATPases AT1G13210 69.5 0.0e+00 1644.4
Lsi04g00308 . 5 1163 Primary Pumps ATPases AT1G13210 69.3 0.0e+00 1627.5
Lsi02g00155 . 6 1031 Primary Pumps ATPases AT1G13210 67.0 0.0e+00 1321.2
Lsi02g02923 . 16 1207 Primary Pumps ATPases AT1G13210 55.1 0.0e+00 1273.8
Lsi02g02923 . 6 1220 Primary Pumps ATPases AT1G17500 74.8 0.0e+00 1792.3
Lsi09g01091 . 1 1197 Primary Pumps ATPases AT1G17500 54.4 0.0e+00 1285.8
Lsi04g00308 . 1 1174 Primary Pumps ATPases AT1G17500 54.4 0.0e+00 1276.5
Lsi02g00155 . 1 1031 Primary Pumps ATPases AT1G17500 55.9 0.0e+00 1120.1
Lsi09g01091 . 7 1182 Primary Pumps ATPases AT1G26130 69.3 0.0e+00 1653.3
Lsi04g00308 . 5 1155 Primary Pumps ATPases AT1G26130 70.6 0.0e+00 1652.1
Lsi02g00155 . 1 1031 Primary Pumps ATPases AT1G26130 65.4 0.0e+00 1322.0
Lsi02g02923 . 9 1172 Primary Pumps ATPases AT1G26130 55.1 0.0e+00 1258.8
Lsi02g02923 . 6 1222 Primary Pumps ATPases AT1G54280 73.4 0.0e+00 1767.3
Lsi09g01091 . 9 1194 Primary Pumps ATPases AT1G54280 54.4 0.0e+00 1272.3
Lsi04g00308 . 5 1173 Primary Pumps ATPases AT1G54280 54.5 0.0e+00 1256.1
Lsi02g00155 . 6 1031 Primary Pumps ATPases AT1G54280 54.8 0.0e+00 1097.4
Lsi04g00495 . 2 931 Primary Pumps ATPases AT1G59820 78.9 0.0e+00 1478.4
Lsi04g00494 . 11 261 Primary Pumps ATPases AT1G59820 66.8 5.5e-102 369.8
Lsi04g00308 . 5 1169 Primary Pumps ATPases AT1G68710 71.1 0.0e+00 1709.1
Lsi09g01091 . 7 1193 Primary Pumps ATPases AT1G68710 69.6 0.0e+00 1685.6
Lsi02g00155 . 1 1036 Primary Pumps ATPases AT1G68710 66.6 0.0e+00 1351.3
Lsi02g02923 . 12 1210 Primary Pumps ATPases AT1G68710 54.5 0.0e+00 1283.5
Lsi02g02923 . 6 1220 Primary Pumps ATPases AT1G72700 73.6 0.0e+00 1774.6
Lsi04g00308 . 1 1174 Primary Pumps ATPases AT1G72700 54.5 0.0e+00 1281.9
Lsi09g01091 . 1 1197 Primary Pumps ATPases AT1G72700 54.2 0.0e+00 1279.6
Lsi02g00155 . 1 1031 Primary Pumps ATPases AT1G72700 55.8 0.0e+00 1117.4
Lsi02g02923 . 6 934 Primary Pumps ATPases AT3G13900 72.0 0.0e+00 1326.2
Lsi09g01091 . 9 913 Primary Pumps ATPases AT3G13900 55.9 9.0e-292 1000.0
Lsi02g00155 . 4 909 Primary Pumps ATPases AT3G13900 54.7 1.3e-290 996.1
Lsi04g00308 . 5 887 Primary Pumps ATPases AT3G13900 55.2 9.0e-284 973.4
Lsi09g01091 . 7 1194 Primary Pumps ATPases AT3G25610 69.9 0.0e+00 1673.7
Lsi04g00308 . 5 1163 Primary Pumps ATPases AT3G25610 70.5 0.0e+00 1671.4
Lsi02g00155 . 2 1031 Primary Pumps ATPases AT3G25610 65.6 0.0e+00 1332.8
Lsi02g02923 . 12 1208 Primary Pumps ATPases AT3G25610 55.5 0.0e+00 1286.6
Lsi04g00308 . 192 1127 Primary Pumps ATPases AT3G27870 64.7 0.0e+00 1236.9
Lsi09g01091 . 194 1152 Primary Pumps ATPases AT3G27870 62.0 0.0e+00 1181.0
Lsi02g02923 . 201 1218 Primary Pumps ATPases AT3G27870 53.0 2.2e-306 1048.5
Lsi02g00155 . 193 1031 Primary Pumps ATPases AT3G27870 62.8 1.4e-300 1029.2
Lsi08g00624 . 32 1188 Primary Pumps ATPases AT5G04930 67.8 0.0e+00 1542.3
Lsi01g01619 . 154 1382 Primary Pumps ATPases AT5G04930 53.5 0.0e+00 1208.4
Lsi11g01706 . 1 838 Primary Pumps ATPases AT5G44240 71.5 0.0e+00 1379.4
Lsi04g01488 . 1 1032 Primary Pumps ATPases AT1G27770 80.5 0.0e+00 1627.8
Lsi01g00892 . 1 1014 Primary Pumps ATPases AT1G27770 78.2 0.0e+00 1572.0
Lsi03g01551 . 4 948 Primary Pumps ATPases AT1G27770 63.6 0.0e+00 1185.2
Lsi09g00868 . 5 976 Primary Pumps ATPases AT1G27770 56.8 0.0e+00 1104.4
Lsi01g00892 . 1 1014 Primary Pumps ATPases AT4G37640 83.3 0.0e+00 1681.0
Lsi04g01488 . 1 1030 Primary Pumps ATPases AT4G37640 77.3 0.0e+00 1570.8
Lsi03g01551 . 4 948 Primary Pumps ATPases AT4G37640 63.9 0.0e+00 1196.8
Lsi09g00868 . 5 974 Primary Pumps ATPases AT4G37640 57.5 0.0e+00 1114.4
Lsi03g01551 . 5 968 Primary Pumps ATPases AT3G57330 71.3 0.0e+00 1360.1
Lsi09g00868 . 61 994 Primary Pumps ATPases AT3G57330 64.9 0.0e+00 1204.9
Lsi01g00892 . 60 1014 Primary Pumps ATPases AT3G57330 64.0 0.0e+00 1178.7
Lsi04g01488 . 60 1033 Primary Pumps ATPases AT3G57330 62.4 0.0e+00 1170.2
Lsi03g01551 . 50 968 Primary Pumps ATPases AT2G41560 70.9 0.0e+00 1305.0
Lsi09g00868 . 126 994 Primary Pumps ATPases AT2G41560 65.4 0.0e+00 1157.1
Lsi04g01488 . 110 1032 Primary Pumps ATPases AT2G41560 63.4 0.0e+00 1130.5
Lsi01g00892 . 105 1014 Primary Pumps ATPases AT2G41560 64.3 0.0e+00 1130.2
Lsi11g00805 . 2 1090 Primary Pumps ATPases AT5G57110 71.2 0.0e+00 1493.4
Lsi02g02841 . 26 1104 Primary Pumps ATPases AT5G57110 67.2 0.0e+00 1393.3
Lsi11g00453 . 87 875 Primary Pumps ATPases AT5G57110 53.9 7.9e-230 794.3
Lsi11g00454 . 1 127 Primary Pumps ATPases AT5G57110 54.5 3.5e-36 151.0
Lsi02g02841 . 6 1120 Primary Pumps ATPases AT3G21180 71.7 0.0e+00 1530.0
Lsi11g00805 . 11 1084 Primary Pumps ATPases AT3G21180 69.8 0.0e+00 1438.3
Lsi11g00453 . 87 875 Primary Pumps ATPases AT3G21180 54.1 2.0e-225 779.6
Lsi11g00805 . 4 1090 Primary Pumps ATPases AT4G29900 71.6 0.0e+00 1502.3
Lsi02g02841 . 16 1117 Primary Pumps ATPases AT4G29900 67.9 0.0e+00 1408.7
Lsi02g02253 . 71 925 Primary Pumps ATPases AT4G29900 50.8 8.4e-256 880.6
Lsi03g01551 . 40 948 Primary Pumps ATPases AT4G29900 50.4 4.6e-246 848.2
Lsi11g00453 . 97 875 Primary Pumps ATPases AT4G29900 55.4 6.5e-232 801.2
Lsi02g02253 . 5 925 Primary Pumps ATPases AT3G63380 61.8 0.0e+00 1164.4
Lsi11g00453 . 27 875 Primary Pumps ATPases AT3G63380 61.1 1.4e-287 986.1
Lsi11g00805 . 118 1074 Primary Pumps ATPases AT3G63380 54.1 1.8e-279 959.1
Lsi02g02841 . 115 1118 Primary Pumps ATPases AT3G63380 52.5 4.9e-277 951.0
Lsi11g00454 . 1 130 Primary Pumps ATPases AT3G63380 60.0 7.8e-41 166.4
Lsi02g02253 . 15 926 Primary Pumps ATPases AT3G22910 59.2 0.0e+00 1112.1
Lsi11g00453 . 28 875 Primary Pumps ATPases AT3G22910 61.9 6.7e-287 983.8
Lsi11g00805 . 117 1074 Primary Pumps ATPases AT3G22910 55.4 6.9e-284 973.8
Lsi02g02841 . 131 1106 Primary Pumps ATPases AT3G22910 53.8 4.1e-276 948.0
Lsi11g00454 . 1 130 Primary Pumps ATPases AT3G22910 68.5 5.0e-48 190.3
Lsi09g01091 . 7 1194 Primary Pumps ATPases AT1G13210 69.5 0.0e+00 1644.4
Lsi04g00308 . 5 1163 Primary Pumps ATPases AT1G13210 69.3 0.0e+00 1627.5
Lsi02g00155 . 6 1031 Primary Pumps ATPases AT1G13210 67.0 0.0e+00 1321.2
Lsi02g02923 . 16 1207 Primary Pumps ATPases AT1G13210 55.1 0.0e+00 1273.8
Lsi07g00437 . 3 682 Primary Pumps ATPases AT1G80660 63.9 0.0e+00 1080.1
Lsi02g01502 . 2 731 Primary Pumps ATPases AT1G80660 61.4 4.8e-308 1053.9
Lsi11g00377 CCT 3 664 Primary Pumps ATPases AT1G80660 59.9 8.8e-294 1006.5
Lsi06g01491 CCT,ECH 5 699 Primary Pumps ATPases AT1G80660 57.7 3.2e-280 961.4
Lsi06g01045 . 3 643 Primary Pumps ATPases AT1G80660 58.2 2.6e-277 951.8
Lsi08g01132 . 1 642 Primary Pumps ATPases AT1G80660 56.5 6.6e-273 937.2
Lsi11g00770 . 1 628 Primary Pumps ATPases AT1G80660 56.0 2.4e-267 918.7
Lsi02g00322 CCT,ECH 2 664 Primary Pumps ATPases AT1G80660 55.4 1.2e-263 906.4
Lsi04g02191 . 9 629 Primary Pumps ATPases AT1G80660 52.9 3.0e-249 858.6
Lsi02g01502 . 6 731 Primary Pumps ATPases AT3G60330 59.1 2.2e-292 1001.9
Lsi06g01491 CCT,ECH 9 699 Primary Pumps ATPases AT3G60330 55.5 1.2e-266 916.4
Lsi07g00437 . 1 682 Primary Pumps ATPases AT3G60330 52.2 2.9e-247 852.0
Lsi02g00322 CCT,ECH 6 661 Primary Pumps ATPases AT3G60330 52.7 1.2e-245 846.7
Lsi11g00377 CCT 1 664 Primary Pumps ATPases AT3G60330 50.6 7.3e-235 810.8
Lsi06g01045 . 1 643 Primary Pumps ATPases AT3G60330 50.4 8.7e-228 787.3
Lsi02g01502 . 1 731 Primary Pumps ATPases AT5G62670 71.0 0.0e+00 1223.0
Lsi06g01491 CCT,ECH 5 699 Primary Pumps ATPases AT5G62670 68.0 0.0e+00 1141.7
Lsi02g00322 CCT,ECH 1 664 Primary Pumps ATPases AT5G62670 65.7 0.0e+00 1078.9
Lsi07g00437 . 6 682 Primary Pumps ATPases AT5G62670 58.4 6.7e-281 963.8
Lsi11g00377 CCT 6 664 Primary Pumps ATPases AT5G62670 56.2 9.4e-267 916.8
Lsi08g01132 . 3 642 Primary Pumps ATPases AT5G62670 54.8 1.3e-252 869.8
Lsi06g01045 . 1 643 Primary Pumps ATPases AT5G62670 54.3 2.1e-250 862.4
Lsi04g02191 . 7 658 Primary Pumps ATPases AT5G62670 51.8 3.3e-243 838.6
Lsi11g00770 . 9 628 Primary Pumps ATPases AT5G62670 54.1 4.3e-243 838.2
Lsi02g01502 . 13 731 Primary Pumps ATPases AT1G17260 54.5 2.7e-258 888.6
Lsi07g00437 . 7 682 Primary Pumps ATPases AT1G17260 51.0 6.5e-236 814.3
Lsi06g01491 CCT,ECH 1 699 Primary Pumps ATPases AT1G17260 50.4 1.8e-230 796.2
Lsi11g00377 CCT 12 664 Primary Pumps ATPases AT1G17260 50.3 2.3e-228 789.3
Lsi02g01502 . 3 731 Primary Pumps ATPases AT3G47950 70.5 0.0e+00 1208.0
Lsi06g01491 CCT,ECH 9 699 Primary Pumps ATPases AT3G47950 68.1 0.0e+00 1138.3
Lsi02g00322 CCT,ECH 6 664 Primary Pumps ATPases AT3G47950 65.7 4.4e-314 1073.9
Lsi07g00437 . 6 682 Primary Pumps ATPases AT3G47950 58.3 8.8e-281 963.4
Lsi11g00377 CCT 6 664 Primary Pumps ATPases AT3G47950 56.0 5.2e-265 911.0
Lsi06g01045 . 6 643 Primary Pumps ATPases AT3G47950 54.6 1.6e-250 862.8
Lsi08g01132 . 10 642 Primary Pumps ATPases AT3G47950 53.6 8.3e-247 850.5
Lsi04g02191 . 7 658 Primary Pumps ATPases AT3G47950 51.8 3.0e-244 842.0
Lsi11g00770 . 9 628 Primary Pumps ATPases AT3G47950 53.1 2.9e-239 825.5
Lsi08g01132 . 128 642 Primary Pumps ATPases AT2G24520 80.3 4.9e-249 857.4
Lsi11g00377 CCT 99 664 Primary Pumps ATPases AT2G24520 75.2 3.0e-246 848.2
Lsi04g02191 . 136 658 Primary Pumps ATPases AT2G24520 80.3 5.2e-243 837.4
Lsi11g00770 . 138 628 Primary Pumps ATPases AT2G24520 83.9 6.6e-238 820.5
Lsi07g00437 . 170 681 Primary Pumps ATPases AT2G24520 79.1 6.6e-238 820.5
Lsi02g01502 . 196 731 Primary Pumps ATPases AT2G24520 75.8 5.6e-237 817.4
Lsi06g01045 . 169 643 Primary Pumps ATPases AT2G24520 76.6 1.1e-213 740.0
Lsi06g01491 CCT,ECH 199 699 Primary Pumps ATPases AT2G24520 74.9 1.4e-211 733.0
Lsi02g00322 CCT,ECH 191 662 Primary Pumps ATPases AT2G24520 72.9 3.2e-200 695.3
Lsi06g01189 CCT 136 522 Primary Pumps ATPases AT2G24520 63.6 1.0e-169 594.0
Lsi02g01502 . 8 731 Primary Pumps ATPases AT5G57350 61.2 1.1e-307 1052.7
Lsi07g00437 . 5 682 Primary Pumps ATPases AT5G57350 60.5 7.6e-301 1030.0
Lsi11g00377 CCT 5 664 Primary Pumps ATPases AT5G57350 59.0 1.8e-286 982.2
Lsi06g01491 CCT,ECH 11 699 Primary Pumps ATPases AT5G57350 57.3 3.1e-278 954.9
Lsi11g00770 . 6 628 Primary Pumps ATPases AT5G57350 57.8 1.8e-273 939.1
Lsi06g01045 . 5 643 Primary Pumps ATPases AT5G57350 57.5 1.1e-270 929.9
Lsi08g01132 . 7 642 Primary Pumps ATPases AT5G57350 55.9 7.7e-269 923.7
Lsi04g02191 . 7 658 Primary Pumps ATPases AT5G57350 54.5 3.0e-265 911.8
Lsi02g00322 CCT,ECH 8 664 Primary Pumps ATPases AT5G57350 54.3 5.2e-257 884.4
Lsi02g01502 . 8 731 Primary Pumps ATPases AT4G30190 60.0 1.8e-300 1028.9
Lsi07g00437 . 5 682 Primary Pumps ATPases AT4G30190 59.5 9.9e-296 1013.1
Lsi11g00377 CCT 5 664 Primary Pumps ATPases AT4G30190 57.5 1.4e-278 956.1
Lsi11g00770 . 8 628 Primary Pumps ATPases AT4G30190 57.9 9.1e-273 936.8
Lsi06g01491 CCT,ECH 11 699 Primary Pumps ATPases AT4G30190 56.3 4.2e-270 927.9
Lsi08g01132 . 9 642 Primary Pumps ATPases AT4G30190 55.3 1.1e-265 913.3
Lsi06g01045 . 5 643 Primary Pumps ATPases AT4G30190 56.4 4.1e-265 911.4
Lsi04g02191 . 6 658 Primary Pumps ATPases AT4G30190 52.9 1.7e-258 889.4
Lsi02g00322 CCT,ECH 8 664 Primary Pumps ATPases AT4G30190 53.2 6.3e-250 860.9
Lsi07g00437 . 2 682 Primary Pumps ATPases AT3G42640 62.1 6.2e-303 1036.9
Lsi02g01502 . 11 731 Primary Pumps ATPases AT3G42640 61.0 8.4e-300 1026.5
Lsi11g00377 CCT 3 664 Primary Pumps ATPases AT3G42640 61.4 1.9e-296 1015.4
Lsi06g01045 . 3 643 Primary Pumps ATPases AT3G42640 58.8 3.8e-276 948.0
Lsi06g01491 CCT,ECH 14 699 Primary Pumps ATPases AT3G42640 57.0 4.3e-272 934.5
Lsi04g02191 . 1 658 Primary Pumps ATPases AT3G42640 53.9 4.8e-263 904.4
Lsi08g01132 . 11 642 Primary Pumps ATPases AT3G42640 56.0 1.2e-261 899.8
Lsi11g00770 . 5 628 Primary Pumps ATPases AT3G42640 55.5 7.9e-258 887.1
Lsi02g00322 CCT,ECH 11 664 Primary Pumps ATPases AT3G42640 54.9 6.3e-255 877.5
Lsi02g01502 . 69 731 Primary Pumps ATPases AT2G18960 61.5 6.2e-281 963.8
Lsi07g00437 . 67 682 Primary Pumps ATPases AT2G18960 60.7 2.5e-274 941.8
Lsi11g00377 CCT 67 664 Primary Pumps ATPases AT2G18960 57.7 4.2e-253 871.3
Lsi06g01491 CCT,ECH 72 699 Primary Pumps ATPases AT2G18960 56.5 2.4e-248 855.5
Lsi08g01132 . 71 642 Primary Pumps ATPases AT2G18960 56.4 1.2e-244 843.2
Lsi11g00770 . 70 628 Primary Pumps ATPases AT2G18960 56.4 9.1e-240 827.0
Lsi06g01045 . 67 643 Primary Pumps ATPases AT2G18960 56.1 2.2e-238 822.4
Lsi04g02191 . 68 658 Primary Pumps ATPases AT2G18960 52.7 3.1e-232 802.0
Lsi02g00322 CCT,ECH 69 664 Primary Pumps ATPases AT2G18960 53.8 1.9e-229 792.7
Lsi07g00437 . 3 682 Primary Pumps ATPases AT2G07560 63.2 4.4e-309 1057.4
Lsi02g01502 . 11 731 Primary Pumps ATPases AT2G07560 60.8 3.8e-300 1027.7
Lsi11g00377 CCT 2 664 Primary Pumps ATPases AT2G07560 60.1 2.9e-292 1001.5
Lsi06g01045 . 3 643 Primary Pumps ATPases AT2G07560 58.2 7.2e-275 943.7
Lsi06g01491 CCT,ECH 14 699 Primary Pumps ATPases AT2G07560 56.2 2.9e-268 921.8
Lsi04g02191 . 1 658 Primary Pumps ATPases AT2G07560 53.0 4.5e-261 897.9
Lsi08g01132 . 8 642 Primary Pumps ATPases AT2G07560 55.2 1.0e-260 896.7
Lsi11g00770 . 7 628 Primary Pumps ATPases AT2G07560 55.2 1.9e-259 892.5
Lsi02g00322 CCT,ECH 11 664 Primary Pumps ATPases AT2G07560 54.2 2.9e-252 868.6
Lsi06g01021 . 5 697 Primary Pumps ATPases AT1G15690 79.0 4.2e-295 1010.4
Lsi11g00624 . 4 611 Primary Pumps ATPases AT1G15690 69.2 6.2e-238 820.5
Lsi02g02823 . 696 1398 Primary Pumps ATPases AT1G16780 80.5 0.0e+00 1176.0
Lsi02g02823 . 696 1398 Primary Pumps ATPases AT1G78920 80.4 0.0e+00 1169.1
Lsi04g00308 . 192 1127 Primary Pumps ATPases AT3G27870 64.7 0.0e+00 1236.9
Lsi09g01091 . 194 1152 Primary Pumps ATPases AT3G27870 62.0 0.0e+00 1181.0
Lsi02g02923 . 201 1218 Primary Pumps ATPases AT3G27870 53.0 2.2e-306 1048.5
Lsi02g00155 . 193 1031 Primary Pumps ATPases AT3G27870 62.8 1.4e-300 1029.2
Lsi06g01195 . 165 546 Primary Pumps ATPases AT4G30120 66.1 9.7e-146 513.5
Lsi11g00779 . 168 549 Primary Pumps ATPases AT4G30120 61.6 2.1e-132 469.2
Lsi02g02923 . 6 934 Primary Pumps ATPases AT3G13900 72.0 0.0e+00 1326.2
Lsi09g01091 . 9 913 Primary Pumps ATPases AT3G13900 55.9 9.0e-292 1000.0
Lsi02g00155 . 4 909 Primary Pumps ATPases AT3G13900 54.7 1.3e-290 996.1
Lsi04g00308 . 5 887 Primary Pumps ATPases AT3G13900 55.2 9.0e-284 973.4
Lsi04g00495 . 2 931 Primary Pumps ATPases AT1G59820 78.9 0.0e+00 1478.4
Lsi04g00494 . 11 261 Primary Pumps ATPases AT1G59820 66.8 5.5e-102 369.8
Lsi02g02923 . 6 1220 Primary Pumps ATPases AT1G17500 74.8 0.0e+00 1792.3
Lsi09g01091 . 1 1197 Primary Pumps ATPases AT1G17500 54.4 0.0e+00 1285.8
Lsi04g00308 . 1 1174 Primary Pumps ATPases AT1G17500 54.4 0.0e+00 1276.5
Lsi02g00155 . 1 1031 Primary Pumps ATPases AT1G17500 55.9 0.0e+00 1120.1
Lsi09g01091 . 7 1182 Primary Pumps ATPases AT1G26130 69.3 0.0e+00 1653.3
Lsi04g00308 . 5 1155 Primary Pumps ATPases AT1G26130 70.6 0.0e+00 1652.1
Lsi02g00155 . 1 1031 Primary Pumps ATPases AT1G26130 65.4 0.0e+00 1322.0
Lsi02g02923 . 9 1172 Primary Pumps ATPases AT1G26130 55.1 0.0e+00 1258.8
Lsi08g00624 . 32 1188 Primary Pumps ATPases AT5G04930 67.8 0.0e+00 1542.3
Lsi01g01619 . 154 1382 Primary Pumps ATPases AT5G04930 53.5 0.0e+00 1208.4
Lsi04g00308 . 5 1169 Primary Pumps ATPases AT1G68710 71.1 0.0e+00 1709.1
Lsi09g01091 . 7 1193 Primary Pumps ATPases AT1G68710 69.6 0.0e+00 1685.6
Lsi02g00155 . 1 1036 Primary Pumps ATPases AT1G68710 66.6 0.0e+00 1351.3
Lsi02g02923 . 12 1210 Primary Pumps ATPases AT1G68710 54.5 0.0e+00 1283.5
Lsi09g01091 . 7 1194 Primary Pumps ATPases AT3G25610 69.9 0.0e+00 1673.7
Lsi04g00308 . 5 1163 Primary Pumps ATPases AT3G25610 70.5 0.0e+00 1671.4
Lsi02g00155 . 2 1031 Primary Pumps ATPases AT3G25610 65.6 0.0e+00 1332.8
Lsi02g02923 . 12 1208 Primary Pumps ATPases AT3G25610 55.5 0.0e+00 1286.6
Lsi09g01091 . 7 1194 Primary Pumps ATPases AT1G13210 69.5 0.0e+00 1644.4
Lsi04g00308 . 5 1163 Primary Pumps ATPases AT1G13210 69.3 0.0e+00 1627.5
Lsi02g00155 . 6 1031 Primary Pumps ATPases AT1G13210 67.0 0.0e+00 1321.2
Lsi02g02923 . 16 1207 Primary Pumps ATPases AT1G13210 55.1 0.0e+00 1273.8
Lsi11g01706 . 1 838 Primary Pumps ATPases AT5G44240 71.5 0.0e+00 1379.4
Lsi02g02923 . 6 1222 Primary Pumps ATPases AT1G54280 73.4 0.0e+00 1767.3
Lsi09g01091 . 9 1194 Primary Pumps ATPases AT1G54280 54.4 0.0e+00 1272.3
Lsi04g00308 . 5 1173 Primary Pumps ATPases AT1G54280 54.5 0.0e+00 1256.1
Lsi02g00155 . 6 1031 Primary Pumps ATPases AT1G54280 54.8 0.0e+00 1097.4
Lsi02g02923 . 6 1220 Primary Pumps ATPases AT1G72700 73.6 0.0e+00 1774.6
Lsi04g00308 . 1 1174 Primary Pumps ATPases AT1G72700 54.5 0.0e+00 1281.9
Lsi09g01091 . 1 1197 Primary Pumps ATPases AT1G72700 54.2 0.0e+00 1279.6
Lsi02g00155 . 1 1031 Primary Pumps ATPases AT1G72700 55.8 0.0e+00 1117.4
Lsi02g02841 . 6 1120 Primary Pumps ATPases AT3G21180 71.7 0.0e+00 1530.0
Lsi11g00805 . 11 1084 Primary Pumps ATPases AT3G21180 69.8 0.0e+00 1438.3
Lsi11g00453 . 87 875 Primary Pumps ATPases AT3G21180 54.1 2.0e-225 779.6
Lsi01g00892 . 1 1014 Primary Pumps ATPases AT2G22950 81.9 0.0e+00 1637.9
Lsi04g01488 . 1 1030 Primary Pumps ATPases AT2G22950 75.9 0.0e+00 1529.6
Lsi03g01551 . 4 948 Primary Pumps ATPases AT2G22950 63.4 0.0e+00 1180.6
Lsi09g00868 . 5 974 Primary Pumps ATPases AT2G22950 57.4 0.0e+00 1095.1
Lsi02g02253 . 15 926 Primary Pumps ATPases AT3G22910 59.2 0.0e+00 1112.1
Lsi11g00453 . 28 875 Primary Pumps ATPases AT3G22910 61.9 6.7e-287 983.8
Lsi11g00805 . 117 1074 Primary Pumps ATPases AT3G22910 55.4 6.9e-284 973.8
Lsi02g02841 . 131 1106 Primary Pumps ATPases AT3G22910 53.8 4.1e-276 948.0
Lsi11g00454 . 1 130 Primary Pumps ATPases AT3G22910 68.5 5.0e-48 190.3
Lsi11g00805 . 4 1090 Primary Pumps ATPases AT4G29900 71.6 0.0e+00 1502.3
Lsi02g02841 . 16 1117 Primary Pumps ATPases AT4G29900 67.9 0.0e+00 1408.7
Lsi02g02253 . 71 925 Primary Pumps ATPases AT4G29900 50.8 8.4e-256 880.6
Lsi03g01551 . 40 948 Primary Pumps ATPases AT4G29900 50.4 4.6e-246 848.2
Lsi11g00453 . 97 875 Primary Pumps ATPases AT4G29900 55.4 6.5e-232 801.2
Lsi04g01488 . 1 1032 Primary Pumps ATPases AT1G27770 80.5 0.0e+00 1627.8
Lsi01g00892 . 1 1014 Primary Pumps ATPases AT1G27770 78.2 0.0e+00 1572.0
Lsi03g01551 . 4 948 Primary Pumps ATPases AT1G27770 63.6 0.0e+00 1185.2
Lsi09g00868 . 5 976 Primary Pumps ATPases AT1G27770 56.8 0.0e+00 1104.4
Lsi11g00805 . 2 1090 Primary Pumps ATPases AT5G57110 71.2 0.0e+00 1493.4
Lsi02g02841 . 26 1104 Primary Pumps ATPases AT5G57110 67.2 0.0e+00 1393.3
Lsi11g00453 . 87 875 Primary Pumps ATPases AT5G57110 53.9 7.9e-230 794.3
Lsi11g00454 . 1 127 Primary Pumps ATPases AT5G57110 54.5 3.5e-36 151.0
Lsi02g02253 . 5 925 Primary Pumps ATPases AT3G63380 61.8 0.0e+00 1164.4
Lsi11g00453 . 27 875 Primary Pumps ATPases AT3G63380 61.1 1.4e-287 986.1
Lsi11g00805 . 118 1074 Primary Pumps ATPases AT3G63380 54.1 1.8e-279 959.1
Lsi02g02841 . 115 1118 Primary Pumps ATPases AT3G63380 52.5 4.9e-277 951.0
Lsi11g00454 . 1 130 Primary Pumps ATPases AT3G63380 60.0 7.8e-41 166.4
Lsi01g00892 . 1 1014 Primary Pumps ATPases AT4G37640 83.3 0.0e+00 1681.0
Lsi04g01488 . 1 1030 Primary Pumps ATPases AT4G37640 77.3 0.0e+00 1570.8
Lsi03g01551 . 4 948 Primary Pumps ATPases AT4G37640 63.9 0.0e+00 1196.8
Lsi09g00868 . 5 974 Primary Pumps ATPases AT4G37640 57.5 0.0e+00 1114.4
Lsi03g01551 . 50 968 Primary Pumps ATPases AT2G41560 70.9 0.0e+00 1305.0
Lsi09g00868 . 126 994 Primary Pumps ATPases AT2G41560 65.4 0.0e+00 1157.1
Lsi04g01488 . 110 1032 Primary Pumps ATPases AT2G41560 63.4 0.0e+00 1130.5
Lsi01g00892 . 105 1014 Primary Pumps ATPases AT2G41560 64.3 0.0e+00 1130.2
Lsi03g01551 . 5 968 Primary Pumps ATPases AT3G57330 71.3 0.0e+00 1360.1
Lsi09g00868 . 61 994 Primary Pumps ATPases AT3G57330 64.9 0.0e+00 1204.9
Lsi01g00892 . 60 1014 Primary Pumps ATPases AT3G57330 64.0 0.0e+00 1178.7
Lsi04g01488 . 60 1033 Primary Pumps ATPases AT3G57330 62.4 0.0e+00 1170.2
Lsi06g01195 . 8 705 Primary Pumps ATPases AT4G30110 68.8 5.5e-275 944.1
Lsi11g00779 . 15 741 Primary Pumps ATPases AT4G30110 65.7 3.8e-268 921.4
Lsi11g00779 . 6 799 Primary Pumps ATPases AT2G19110 60.7 1.4e-267 919.8
Lsi01g00038 . 1 1087 Primary Pumps ATPases AT5G44790 68.2 0.0e+00 1379.8
Lsi01g01690 . 1 953 Primary Pumps ATPases AT1G63440 70.4 0.0e+00 1316.2
Lsi09g00270 . 25 968 Primary Pumps ATPases AT1G63440 68.7 0.0e+00 1276.5
Lsi10g00233 . 107 818 Primary Pumps ATPases AT4G37270 76.7 1.3e-312 1068.9
Lsi11g00488 . 1 1152 Primary Pumps ATPases AT5G23630 74.6 0.0e+00 1735.7
Lsi05g01889 . 50 249 Primary Pumps ATPases AT5G47030 74.1 1.6e-78 289.3
Lsi02g00599 . 7 375 Primary Pumps ATPases AT1G15700 68.4 6.1e-124 441.0
Lsi01g00426 . 7 370 Primary Pumps ATPases AT1G15700 65.3 4.1e-120 428.3
Lsi05g00596 . 13 347 Primary Pumps ATPases AT1G15700 59.5 2.4e-99 359.4
Lsi08g00237 . 1 239 Primary Pumps ATPases AT4G09650 61.7 3.3e-72 268.5
Lsi02g02578 . 428 578 Primary Pumps ATPases AT5G13450 63.6 1.3e-50 196.4
Lsi03g01210 . 1407 1571 Primary Pumps ATPases AT5G13450 52.1 3.6e-40 161.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000055 12 8 11 13 11 10 14 10 10 10 9 10 13 10 10 15 10 16 3 10 10 10 9 9 10 9 10 16 13 9 320
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi02g01502 Lsi_Chr02 FPKM 1.70614 0.48983 9.469872 9.009664 3.928887 1.811599 5.326785 6.944893 7.669494 11.387386