Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01541 ATGGCTGAAAATGAACAGGAGATGCGATCTTTGGCTTTGACGCCCACTTGGTCTGTTGCTTCTGTGCTGACCATTTTCGTTGCAGTCTCTTTGCTTGTCGAGCGGTCCATTCACCGGCTAAGCACCTGGCTGGGGAAAACTAACCGGAAACCACTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTTTTAACAGCTACATCAAGCTCAATAGCAAATATCTGCATCCCATCAAAGTTCTACAATACCCCTTTTACTCCATGCACCAAAGCTGAGGCTGAAGAACAGAAAGATGACAGTTCATCTGAGGAACGGAAACTATATACAGACTCGGGTTATGAGCCGTTTGTTTCATACGAGGGTCTTGAGCAATTGCATCGCTTTATATTTATAATGGCAGTAACTCATATATCTTATAGCTGCTTAACAATGTTACTGGCAATTGTGAAGATTCACAGATGGAGAGTCTGGGAGGATGAAGCCCACATGGACAGACATGATTCACTAAATGGTAAGCTCTATGGTCAGGTAATCAAAGTTTGTAATGACACAGAGTTTGGAGAAGCAACATTTCCCCCCTATATCTGGAGTTCATGTTTTATTTACTATTTAATATGTCGTATGAAGGACTTTTGCTTTCTTTTAAGATATCACGAGAGAAATGACACTGCGGAGGCAATCAACCTTTGTTCGATATCACACATCAAATCCTATGACGAGGAACAGTTTTCTAATCTGGGTGTGATGAGCTACACCAAGAGGGATTTGATGATGAAATCAAAGGAAGAGTTGGATAATGATGAAAGTAAACTCTTTCTGTACAATGGTCACCATTGTATTCCTAATATTTGCATTCTCTCCTTCTGCCCTTTTAAAACATGTTTTTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCTGACTACCTCACACTCCGCAAAGGCTTCATCATGGTATTCGTAGTAAAATCTAACATAGTTACAATATTTAGGAATCACCACCTCTCCTTGACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTAGGCGTGAGTGGTCCATTGTGGGGATTCGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCAATTGCTCATGTCATTGCAACATTGGCATTGGAAAGTGCTGGTATAACTGGTTCATTTTCGGGTTCAAAGCTAAAGCCAAGAGATGATCTTTTCTGGTTTAAGAAGCCTGAACTCCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAATGCATTCGAGTTGGCATCATTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTCATTAGGAATCATATGCTTGTCTATGCAAGACTTATTTTGGGATTCGCTGGGCAGTTCATTTGCAGCTACAGCACCTTGCCCTTGTATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATTCATGGTTGGGGGAAGGCAGCAAGAAGGAAAAGAAGGCTTCGCATGTTCGCAGATGACACCACGATTCACACCGAAACAAGCACTGTGATGTCGCTTGAGGATGATGACCGTCGGCTTATTGATGATACTTCTGAAACTACTGCTGACTATACGGCAATTGAACTACAGCCAACTTCTGTACAAGACGAACCTGACTCTGTTACTAATGAACAGCCAAGCAGGGCTAGAACACCTCTTCTACAACCCTCTACATCTCTTTCTTCAGCAGTTAATCATAAGATGATCAGAGTTCGATTCATGCTGTCCCTCAACCTTGACATTGCTTCTCACACAGCTACAAGATGGGCACGGTCCCTGACATTGGTACGGCGGACAAGAAGGACGGCAAATCGAGCCAGAACAGCACCTGCCGCTCGGATTCTCCACACACCCACATCCATTTTGCAGACAAGGAGGGTTGCAATAGTCGCCACCGCCGCAGCAGGTTCCTGTGTGGCAGTAATTGCAGCAGTCCTGTACATAAGGCAGACGTTGGCCTACAATCTCACTCTGAGCAATGGGGTTGTCCACAACTTCTTCATTGGCAAAGCCAAGGTGAAGAAGGCTGCAGAAGAGCAGAAAGATAGTGAGAAACTTGGAATTGGAGAAGGCCATTTCTACTGA 2217 43.03 MAENEQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSIANICIPSKFYNTPFTPCTKAEAEEQKDDSSSEERKLYTDSGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRVWEDEAHMDRHDSLNGKLYGQVIKVCNDTEFGEATFPPYIWSSCFIYYLICRMKDFCFLLRYHERNDTAEAINLCSISHIKSYDEEQFSNLGVMSYTKRDLMMKSKEELDNDESKLFLYNGHHCIPNICILSFCPFKTCFFRQFGNSVVRADYLTLRKGFIMVFVVKSNIVTIFRNHHLSLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPIAHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFICSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFADDTTIHTETSTVMSLEDDDRRLIDDTSETTADYTAIELQPTSVQDEPDSVTNEQPSRARTPLLQPSTSLSSAVNHKMIRVRFMLSLNLDIASHTATRWARSLTLVRRTRRTANRARTAPAARILHTPTSILQTRRVAIVATAAAGSCVAVIAAVLYIRQTLAYNLTLSNGVVHNFFIGKAKVKKAAEEQKDSEKLGIGEGHFY 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21259002 21267233 + Lsi02G015410.1 Lsi02g01541 656283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01541 738 PANTHER MLO-LIKE PROTEIN 1 4 121 IPR004326 GO:0006952|GO:0016021
Lsi02g01541 738 PANTHER MLO-LIKE PROTEIN 11 4 121 - -
Lsi02g01541 738 PANTHER MLO-LIKE PROTEIN 11 300 591 - -
Lsi02g01541 738 PANTHER MLO-LIKE PROTEIN 1 119 188 IPR004326 GO:0006952|GO:0016021
Lsi02g01541 738 PANTHER MLO-LIKE PROTEIN 1 300 591 IPR004326 GO:0006952|GO:0016021
Lsi02g01541 738 Pfam Mlo family 9 221 IPR004326 GO:0006952|GO:0016021
Lsi02g01541 738 Pfam Mlo family 298 539 IPR004326 GO:0006952|GO:0016021
Lsi02g01541 738 PANTHER MLO-LIKE PROTEIN 11 119 188 - -
Lsi02g01541 738 MobiDBLite consensus disorder prediction 576 601 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01541 Lsi-Chr2:21259002 Lsi02g01432 Lsi-Chr2:19938652 3.33E-31 dispersed
Lsi02g01541 Lsi-Chr2:21259002 Lsi04g01324 Lsi-Chr4:21042641 1.39E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01541 K08472 - csv:101217434 569.311