Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g01652 | ATGAAATTGTGGCCATTCAAGAATGCCGTTGTCACCGTTCCTGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAGTCATTGCCGGTCTTAATGTCATGCGAATGATCAACGAGCCTACAGCTGCTGCTATTGCTTATGGACTCGACAAAAAGGCGACCAGTGTTGGCAAGAAGAATGTTCTGATTTTTTATCTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATTGAGGAAGGCATTTTCGAGGTGAAGGCAACTGTCGGTGACACCCATCTCGGCCGTGAGGATTTTAACAACATATTGGTTAATCATTTTGTTCAAGAATTCAAGAGGAAGCATAAGAAAGACATTAGTGGAAATCCAAGAGCTCTCATGAAGGTTGAGGACTGCTTGTGA | 411 | 45.26 | MKLWPFKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRMINEPTAAAIAYGLDKKATSVGKKNVLIFYLGGGTFDVSLLTIEEGIFEVKATVGDTHLGREDFNNILVNHFVQEFKRKHKKDISGNPRALMKVEDCL | 136 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22326465 | 22327019 | + | Lsi02G016520.1 | Lsi02g01652 | 656394 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g01652 | 136 | Pfam | Hsp70 protein | 7 | 133 | IPR013126 | GO:0005524|GO:0140662 | |
Lsi02g01652 | 136 | Gene3D | - | 55 | 97 | - | - | |
Lsi02g01652 | 136 | Gene3D | Actin; Chain A, domain 4 | 98 | 132 | - | - | |
Lsi02g01652 | 136 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 6 | 132 | IPR013126 | GO:0005524|GO:0140662 | |
Lsi02g01652 | 136 | SUPERFAMILY | Actin-like ATPase domain | 6 | 120 | IPR043129 | - | |
Lsi02g01652 | 136 | Gene3D | - | 6 | 54 | - | - | |
Lsi02g01652 | 136 | PRINTS | 70kDa heat shock protein signature | 72 | 82 | - | - | |
Lsi02g01652 | 136 | PRINTS | 70kDa heat shock protein signature | 9 | 29 | - | - | |
Lsi02g01652 | 136 | PANTHER | HEAT SHOCK COGNATE 70 KDA PROTEIN 1 | 6 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g01652 | Lsi-Chr2:22326465 | Lsi11g00825 | Lsi-Chr11:10226844 | 1.08E-69 | dispersed | |
Lsi02g01652 | Lsi-Chr2:22326465 | Lsi02g01657 | Lsi-Chr2:22358510 | 3.47E-73 | proximal | |
Lsi01g01415 | Lsi-Chr1:12295409 | Lsi02g01652 | Lsi-Chr2:22326465 | 1.90E-76 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g01652 | K03283 | - | csv:101211905 | 230.335 |