Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01666 ATGACTTGGTGCATCTTTGCAAAGATTCTATTGCTCGGCTCTATGGACTCTGTGGTTATCCCTAACACATATTTCAGTGGTTTGAAATATGTAAGTCCAACTTTCTCCATTGCTATGTCCAATGCTGTTCCTGCCCTTTCCTTCTTCTTTGCTTGGCTTTTTAGGATGGAGAAGGTTGATATTAGGAGAATTTCATGTAAAGCAAAGATATTGGGGACAGCTGTGACAGTAGGAGGAGCAATGATAATGACATTTGTAAGAGGGCCAAATTTGAGATTTCCTTGGACAAAAGGAGATAATTCCCATAATCACCCTTCAACTTCTGCAGCCAAGAATAATCAAGACTCTTTCAAAGGGGTCATTTTGGTCACTATCTCTTGTCTTTGCTCTTCTGTTTCATGCATTCTTCAGGCAATTGTATTGAAATCATATCCAGTGGGGCTGATTGTAACAGTTTTGGTATGCATAGTGGGAGTTGTGGAAGGCACAGTGGTAGCATTAGCAATGGAATGGAACAACCCAGCTGCTTGGTCAATTCATTTTGATTTTCAACTCTTGGCTATCCTTTATGCTGGAATATTAATCTCAGGGTTTTCATACTACGTTCAAGGAGTTGTAATGGAAGAAAAAGGACCTGTTTTTTTGACAGCATTTTTTCCTCTAAGTACAATCATTGTTGCAATCATAAGCTCATTTGCAGTCTCTGAGATTTTGTCTTTGGGAAAGTAA 729 39.09 MTWCIFAKILLLGSMDSVVIPNTYFSGLKYVSPTFSIAMSNAVPALSFFFAWLFRMEKVDIRRISCKAKILGTAVTVGGAMIMTFVRGPNLRFPWTKGDNSHNHPSTSAAKNNQDSFKGVILVTISCLCSSVSCILQAIVLKSYPVGLIVTVLVCIVGVVEGTVVALAMEWNNPAAWSIHFDFQLLAILYAGILISGFSYYVQGVVMEEKGPVFLTAFFPLSTIIVAIISSFAVSEILSLGK 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22473284 22477755 + Lsi02G016660.1 Lsi02g01666 656408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01666 242 SUPERFAMILY Multidrug resistance efflux transporter EmrE 7 85 - -
Lsi02g01666 242 PANTHER WAT1-RELATED PROTEIN 1 242 IPR030184 GO:0016021|GO:0022857
Lsi02g01666 242 PANTHER WAT1-RELATED PROTEIN 1 242 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01666 Lsi-Chr2:22473284 Lsi04g00873 Lsi-Chr4:8539635 1.02E-87 dispersed
Lsi02g01666 Lsi-Chr2:22473284 Lsi02g01668 Lsi-Chr2:22494244 4.28E-91 proximal
Lsi02g01665 Lsi-Chr2:22456647 Lsi02g01666 Lsi-Chr2:22473284 9.30E-61 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01666 - - csv:101222036 375.941