Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01691 ATGCAAATCCTTACGATCTTCGGAGTTTCTCAAGGCAAGATTCGACTTTCATTTTCCTTTCAATCTCAAGTTTCTACTACTTCTCCTTACTTCTCTCCGATTCAATCTCGACTTGAACGTTCTTCTTTTGGGATTGCATTTGACATTGATGGGGTTGTTCTACGGGGGAACCATCCTATTGGAGGGTCTAGCAAAGCTTTGAAGAGATTGTATGTGGATTCTACATCTTCTGGAGGCGGCACTCCAGAATCCAGACGTGCCATTGAATTGAGTGAACTTTTAGGAGTGAATGTGTTACCTTCTCAGCCAGCTCTTGTTATGTCTGAGTATGGTTTCAAAAAAGTTTTCTCCATTGATGAATATGCTTCATTCTTTGAGAATATTGATCCTGTATCCCAATACAAGAACTGGACATCCAAGCAAGCTTTTGATTTGACCTGCAACCCCGAGAAGTTGATGAGAAGGCAGAGTGTTTTATCTGAAAGAGTGAAGGCGGCTTTTGTTGTCAGTGATCCTGTTGATTGGGGCAGGGATATCCAAGTTCTTTGTGATGTTTTAAGATCTGGAGGCCTTCCAGGACAAGAGAATGGGAATCAAGTGCCTTTATATTTTGCTGCAGATGATTTTGAATATCAGGCTGCATTTCCTTTTAAGCGGCTTGGTATAGGCGCCTTTAAAATTGCACTAGAAAGTATATTTAATAGAATTCACCATAGACCTCTCGAATACGTTTCTTATGGGAAACCAAATCCCCTTGTGTTTAAGAATGTTGAAGCTGTATTGAGACAGATTCTCTCATCTCACTGTGATGATCATTTTGTGAACAAAGGAGATATTGAATTTAATGGTTTTAAAACACTTTATATGATTGGTGACAACCCTGTGGTAGATATCAAAGGTGCACGAGAGGCAGGACTACCTTGGTTTTCTATTTTAACAAGGACAGGAGTTTTCAGGGGCGAAGCAAATCACATCGAGTTTCCAGCTGATCTTGTTGTTAATACTGTTGAAGAAGCAGTGGACTATATTTTGGAATCAGAACACATTTCTTGA 1053 39.89 MQILTIFGVSQGKIRLSFSFQSQVSTTSPYFSPIQSRLERSSFGIAFDIDGVVLRGNHPIGGSSKALKRLYVDSTSSGGGTPESRRAIELSELLGVNVLPSQPALVMSEYGFKKVFSIDEYASFFENIDPVSQYKNWTSKQAFDLTCNPEKLMRRQSVLSERVKAAFVVSDPVDWGRDIQVLCDVLRSGGLPGQENGNQVPLYFAADDFEYQAAFPFKRLGIGAFKIALESIFNRIHHRPLEYVSYGKPNPLVFKNVEAVLRQILSSHCDDHFVNKGDIEFNGFKTLYMIGDNPVVDIKGAREAGLPWFSILTRTGVFRGEANHIEFPADLVVNTVEEAVDYILESEHIS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22677079 22681808 - Lsi02G016910.1 Lsi02g01691 656433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01691 350 PANTHER HYDROLASE FAMILY PROTEIN / HAD-SUPERFAMILY PROTEIN 17 102 - -
Lsi02g01691 350 PANTHER CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED 102 349 - -
Lsi02g01691 350 PANTHER CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED 17 102 - -
Lsi02g01691 350 Gene3D - 105 246 IPR023214 -
Lsi02g01691 350 Gene3D - 45 102 IPR023214 -
Lsi02g01691 350 Gene3D - 247 340 IPR023214 -
Lsi02g01691 350 TIGRFAM CECR5: HAD hydrolase, TIGR01456 family 102 344 IPR006353 -
Lsi02g01691 350 Pfam HAD-hyrolase-like 246 339 - -
Lsi02g01691 350 SUPERFAMILY HAD-like 45 340 IPR036412 -
Lsi02g01691 350 PANTHER HYDROLASE FAMILY PROTEIN / HAD-SUPERFAMILY PROTEIN 102 349 - -
Lsi02g01691 350 TIGRFAM HAD-SF-IIA: HAD hydrolase, family IIA 106 316 IPR006357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi02g01691 Lsi04g01031 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01410 Lsi-Chr2:19465213 Lsi02g01691 Lsi-Chr2:22677079 8.42E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01691 - - bhj:120080430 620.157