Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g01730 | ATGTCGATGTCTTCTTCCTCCGACTCCTTCGTTGACTCTCACTTACTCTGTGACGAGGACTCCTCCGGTATTTTGTCCGGAGAGTCGCCGGAGTACTCCTCTGACCTTGAATCGCCGGCCAGCAGCGAGGATTCTATCGCTAGCTTCATAGAGGACGAGAGGCACTTCGTTCCTGGAATTGATTACTTGTCGCGCTTTCAGTCTCAATCGCTCGATTCTTCCGCAAGAGCCGACTCTGTTGCATGGATTCTCAAGGTTCAAGCATATTACGGTTTTCAACCACTCACTGCATACCTTTCCGTCAACTACTTGGATCGATTCCTTTATTCTCGCCGCTTGCCGGAAACAAATGGATGGCCATTGCAGCTTCTTTCAGTAGCTTGTTTGTCACTTGCAGCTAAAATGGAGGAACCCATTGTTCCTTCATTCATGGATCTGCAGATTGAAGGAGCAAAATATATATTTGAACCTAGAACAATACGTAGGATGGAGCTTCTTGTGCTGACAACTTTGAATTGGCGGCTCCGATCCGTAACACCTTTCAGCTTTATCGGATTCTTCGCCTACAAAGTTGATCCCACCGGAACATTTTCCAGTTTTCTCAACTCACGCTCCACGGAAATTATTCTCTCCAATATTCGAGACGCTACCTTTCTTGAGTACTGGCCTTCCTGCATTGCTGCCGCTGCCTTACTTTGTGCGGCAAATGAAATACCCAATTTGACCCTCTTGAATCCTGAACAGGCCGAGTCTTGGTGCAATGGACTCAGCAAAGATAAAATTGTCGAATGTTATCGGTTAATGCAACCGTTAATAACGGAGAGTCGTCGGAGGAAGCCACCAAAAGTGATACCGCAGCTCCGAGTCAGAATCCGAGCTGGGTTGAGATACAGTGACTCGTCATCCTCCTCCTCCTCATCAAGGTTACCTTTTAAAAGGAGGAAGTTAAATAATTGCTTGTGGGTAGAAGATGACAAAGAAAATTCCAAGTTTAGAGCAGACGAATAA | 1008 | 46.23 | MSMSSSSDSFVDSHLLCDEDSSGILSGESPEYSSDLESPASSEDSIASFIEDERHFVPGIDYLSRFQSQSLDSSARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSRRLPETNGWPLQLLSVACLSLAAKMEEPIVPSFMDLQIEGAKYIFEPRTIRRMELLVLTTLNWRLRSVTPFSFIGFFAYKVDPTGTFSSFLNSRSTEIILSNIRDATFLEYWPSCIAAAALLCAANEIPNLTLLNPEQAESWCNGLSKDKIVECYRLMQPLITESRRRKPPKVIPQLRVRIRAGLRYSDSSSSSSSSRLPFKRRKLNNCLWVEDDKENSKFRADE | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22987948 | 22989835 | - | Lsi02G017300.1 | Lsi02g01730 | 656472 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g01730 | 335 | CDD | CYCLIN | 76 | 168 | IPR013763 | - | |
Lsi02g01730 | 335 | ProSitePatterns | Cyclins signature. | 76 | 107 | IPR006671 | - | |
Lsi02g01730 | 335 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
Lsi02g01730 | 335 | SUPERFAMILY | Cyclin-like | 39 | 175 | IPR036915 | - | |
Lsi02g01730 | 335 | PANTHER | CYCLINS | 24 | 318 | IPR039361 | - | |
Lsi02g01730 | 335 | PANTHER | CYCLIN-D1-1 | 24 | 318 | - | - | |
Lsi02g01730 | 335 | SUPERFAMILY | Cyclin-like | 160 | 283 | IPR036915 | - | |
Lsi02g01730 | 335 | SMART | cyclin_7 | 81 | 169 | IPR013763 | - | |
Lsi02g01730 | 335 | Gene3D | - | 48 | 264 | - | - | |
Lsi02g01730 | 335 | Gene3D | - | 59 | 176 | - | - | |
Lsi02g01730 | 335 | SMART | Cyclin_C_2 | 178 | 311 | IPR004367 | - | |
Lsi02g01730 | 335 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Lsi02g01730 | 335 | Pfam | Cyclin, N-terminal domain | 46 | 175 | IPR006671 | - | |
Lsi02g01730 | 335 | Pfam | Cyclin, C-terminal domain | 178 | 280 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00899 | Lsi-Chr1:7243105 | Lsi02g01730 | Lsi-Chr2:22987948 | 7.32E-33 | dispersed | |
Lsi02g01730 | Lsi-Chr2:22987948 | Lsi04g00515 | Lsi-Chr4:4784510 | 2.60E-109 | dispersed | |
Lsi02g01730 | Lsi-Chr2:22987948 | Lsi08g01007 | Lsi-Chr8:18603898 | 3.70E-57 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g01730 | K18810 | - | csv:101210686 | 614.764 |