Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01764 ATGGCAGCCAAGCCCAACTCCGTTTCCTTCAGGGTTCCGTACAGGAACCTCCATGATGCAGAAGTGGAGATGGTGACTGTTGATGAACACCAGCTCCACGGGATCGATCTCAATTCTCCTTCTGCTGATGGATGTCCCAATGGAAGCCAAGACAGTTCACCCTCAACGCCTCATGTTAGATCTACACCCAACAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCCGGTGTTCAATTTGGTTGGGCATTACAGCTTTCCCTACTAACTCCCTATATTCAGACGCTCGGAATTGAGCATGCATTTTCTTCCTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTCGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATTCTAGGAGATACGAAGGAGCACTGCAGAGTATATAAGGGTACACGAACAAGGGCAGCTATTATCTTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGCGGAAACTGGCACAAATGGTTTCCTTTCCTTTTAAGTAATGCTTGCTGTGAAGCCTGCGGAAACCTTAAAGCTGCATTTCTTATTGCCGTGCTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCGATGAAGTTCCACTTACTGCTGTAGATCAACCACCACATTTATCAGATTCTGCTCCTCTGTTGAATGGGAATGAACAAAATAGTCCTAATATTTTGAAACCAGAACTTAACAGTCTGAATGGGAGCAATGTTGACTATGGCTATCAAGAGAATATTCATGTGAAAAATTCAAAATCAAAAAGTGAGGAAAATCACAGCGAAAGTTATTATGATGGTCCTGCAACAGTGGTAGTCAAATTGTTGACCAGTTTAAGACATCTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCTTTCTTCTTATTTGATACGGATTGGATGGGAAGGGAAGTCTATCATGGGGACCCAAAAGGCAGTTTGGCTGACGAACAGGTTTATGATCAGGGTGTGAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATAGAGCCCATGTGTCAGCGCATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTCATTGTGTTTGCATGCATGACGGGAACTACTATTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATGTTATTGGGGGAAATTCAACAATAAAAAATGCTGCCTTGGCTGTTTTTGCTCTTCTTGGTTTTCCTCTCGCAATAACATATAGTGTTCCCTTCTCTTTGACAGCAGAATTGACTGCTGATTCTGGTGGTGGTCAAGGTTCGGATGGAGTTCATCTAGTATTGTTTTTCTTGGTGTTTACAGCCTACCTGGATTCTGATACTTTAGAGACTATGATTTTTACAGGATTGGCTATAGGAGTTCTCAATCTTGCAGTTGTTATTCCTCAGGTATTTACAACGAGCATGATTGTATCCCTGGGAGCTGGGCCATGGGATGCTTTATTCAATGGAGGAAACATTCCTGCATTTGCTTTGGCCTCTATATGTGCGCTTGCAGCCGGAGTCGTTGCAGTTCTTAGATTGCCTAATCAAATCAACAGTTCTTTCAAATCCACAGGTTTTCATTTTGGTTAA 1917 42.31 MAAKPNSVSFRVPYRNLHDAEVEMVTVDEHQLHGIDLNSPSADGCPNGSQDSSPSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSNACCEACGNLKAAFLIAVLFLTICTLVTIYFADEVPLTAVDQPPHLSDSAPLLNGNEQNSPNILKPELNSLNGSNVDYGYQENIHVKNSKSKSEENHSESYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLADEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFIVFACMTGTTIISLISVSQYSEGIEHVIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGGQGSDGVHLVLFFLVFTAYLDSDTLETMIFTGLAIGVLNLAVVIPQVFTTSMIVSLGAGPWDALFNGGNIPAFALASICALAAGVVAVLRLPNQINSSFKSTGFHFG 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23384820 23390761 - Lsi02G017640.1 Lsi02g01764 656506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01764 638 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 47 535 - -
Lsi02g01764 638 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 562 638 - -
Lsi02g01764 638 Pfam MFS/sugar transport protein 83 283 - -
Lsi02g01764 638 CDD MFS_SLC45_SUC 69 620 - -
Lsi02g01764 638 SUPERFAMILY MFS general substrate transporter 68 626 IPR036259 -
Lsi02g01764 638 Gene3D MFS general substrate transporter like domains 62 625 IPR036259 -
Lsi02g01764 638 PANTHER SUGAR TRANSPORTER 562 638 - -
Lsi02g01764 638 PANTHER SUGAR TRANSPORTER 47 535 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01764 Lsi-Chr2:23384820 Lsi08g01052 Lsi-Chr8:19137124 4.48E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01764 K15378 - csv:101205348 1108.2