Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01843 ATGCCTCGCTCTCTTCTCCTTCTCTCCATCTTCCTCCTCCTCCTCTCCTCCGCCGCCGCCCACAGCGGCCACGCCGATGACAGCGGCGGCGGAGACGGCGGTGACGGTCCTTCCCCTTCCCCCAACCTCCGCTCCAAGCATCTCATCCTCGTCAAGATCGGCTGCCTCATTATCATCTTCTTCGGCACCTTCATACCTGGAATCTCCCCATGCTTCTTCAAATGGAACGATGGATTCCTCGTCCTCGGCACTCAGTTCGCCGGCGGCGTCTTCTTCGGCACCGCTATGATGCATTTCCTCTCTGATGCTAACGAGACGTTTGGCGATTTGACTGATAAGGCGTATCCATTCGCGTTTATGCTTGCTTGTGTAGGGTTTTTGATGACTATGGCGGCGGATTGTGTGATTTCGTATCTGTATCGCAAAGAAAACGTTGATTCTTCCACTGATGTTGAACTTCGAGGAGCTGCAACTTCACCCTCAAAGTTTCAGGTCCCAAATGGCAGCAATGGCCATCATCCACACCCAACTTTCACAACAATGGGTTCATTTGGGGACAGCATTTTACTGATTGTTGCATTGTGTTTTCACTCCGTCTTTGAAGGCATCGCCATCGGAGTTGCAGAGACCGAAGCCGATGCTTGGAAAGCCCTATGGACGATCTCCCTCCACAAGGTCTTTGCAGCCATTTCCATGGGCATTGCTCTCCTCCGTATGATCCCAAACCGCCCTCTGTTGTCGAGTGCTGCCTATTCCTTTGCTTTTGCCATCTCGAGCCCCATCGGCATTGCCATTGGCATTGTAATCGACGCCACGACACAAGGCGCGGTTGCAGATTGGATATATGCCATCTCAATGGGGCTGGCTTGTGGAGTGTTCATTTATGTGTCAATAAACCATCTGCTTTCAAAGGGATACATCCCTAAGGATTCAGTTGTTGTGGACAATCCAAATTATAAGTTTGTAGCTGTGCTTTTAGGAATTGGAGTTATAGCTGTTGTGATGATTTGGGACACTTGA 1020 50.59 MPRSLLLLSIFLLLLSSAAAHSGHADDSGGGDGGDGPSPSPNLRSKHLILVKIGCLIIIFFGTFIPGISPCFFKWNDGFLVLGTQFAGGVFFGTAMMHFLSDANETFGDLTDKAYPFAFMLACVGFLMTMAADCVISYLYRKENVDSSTDVELRGAATSPSKFQVPNGSNGHHPHPTFTTMGSFGDSILLIVALCFHSVFEGIAIGVAETEADAWKALWTISLHKVFAAISMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGIVIDATTQGAVADWIYAISMGLACGVFIYVSINHLLSKGYIPKDSVVVDNPNYKFVAVLLGIGVIAVVMIWDT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24208141 24212408 + Lsi02G018430.1 Lsi02g01843 656585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01843 339 Pfam ZIP Zinc transporter 50 334 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lsi02g01843 339 PANTHER ZINC TRANSPORTER 11 31 338 - -
Lsi02g01843 339 PANTHER ZINC/IRON TRANSPORTER 31 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01843 Lsi-Chr2:24208141 Lsi04g01927 Lsi-Chr4:26474606 3.45E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01843 K14709 - csv:101208105 530.406