Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g01903 | ATGGTTGAATTAGACTACCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAGGGATTCGGATGCCCCCGGAACAAAAGAGTATGTTCATGTCCGTGTCCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAAGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAGCGCAAGAACGTGTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTTTGA | 339 | 45.13 | MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 112 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24954852 | 24955190 | + | Lsi02G019030.1 | Lsi02g01903 | 656645 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g01903 | 112 | CDD | eIF1_SUI1 | 28 | 111 | IPR005874 | GO:0003743 | |
Lsi02g01903 | 112 | PANTHER | BNAA10G09260D PROTEIN | 1 | 112 | - | - | |
Lsi02g01903 | 112 | Gene3D | - | 2 | 112 | - | - | |
Lsi02g01903 | 112 | PIRSF | Transl_init_SUI1_Euk | 1 | 112 | IPR005874 | GO:0003743 | |
Lsi02g01903 | 112 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 30 | 100 | IPR001950 | GO:0003743|GO:0006413 | |
Lsi02g01903 | 112 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 112 | - | - | |
Lsi02g01903 | 112 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 7 | 112 | IPR005874 | GO:0003743 | |
Lsi02g01903 | 112 | Pfam | Translation initiation factor SUI1 | 27 | 100 | IPR001950 | GO:0003743|GO:0006413 | |
Lsi02g01903 | 112 | SUPERFAMILY | eIF1-like | 4 | 112 | IPR036877 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g01903 | Lsi-Chr2:24954852 | Lsi05g00595 | Lsi-Chr5:7383441 | 1.54E-75 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g01903 | K03113 | - | csv:101202908 | 226.098 |