Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g01904 ATGGAATTCTTCAAGCTTTTTGACATGTTTATGATTTCTTGTTCTGAGTTTACCATGTTGAGGTTGTTGGTTATTCAGTTCATTAAAGAGCAGCAAGTTTTCGATAAAGCTCTTCGGTTCCTCCTCGATGCTTCGAAGACGATCGCTTTCGCTTTGTTTCTATCTCTTCTCGCTCTAGGAAGCAATAATGGAGAGCTTGATGGATGGGAAGGGACTGATGAACTGGGCAAGCAACTTTTCGGAGTATATGTATCGAGAGATATCGGAGTTCGTCGACGTTGTCGGAGAAAGTTGTGTGGAAGGGATGTCAATGGAGAGTATGTTATGGACCATGATAAACACAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTATTGTTCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCAATCGAGCTTTCGATACTATCCGAATATTATGGACGTGAAATAGCAGCATATGATATCCAGACCACACGATGTGATTTGTACGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCAGCTGAGGGGGCTCCAGAGGAATTTGATCAGACCATATTTTCGGTGAATAGGGACAGGACGATTGGGCCGATTGAGGAGCAAGCTCTTCATTTTGTTAAAGAGCAACAAAGGAAAAGGAGATTCACTGACACTGCCAACTTCACGCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATTGGCCAAGCGGAGGCCGTCGAACACGCAAAAGCCACTGGCCATGTCAACTTTCAAGAGTATAGATGA 879 44.03 MEFFKLFDMFMISCSEFTMLRLLVIQFIKEQQVFDKALRFLLDASKTIAFALFLSLLALGSNNGELDGWEGTDELGKQLFGVYVSRDIGVRRRCRRKLCGRDVNGEYVMDHDKHKATELRQVIAATVASDPTRYSEAFLGKPNEEYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPAEGAPEEFDQTIFSVNRDRTIGPIEEQALHFVKEQQRKRRFTDTANFTLRCGVCQIGVIGQAEAVEHAKATGHVNFQEYR 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24971894 24980899 + Lsi02G019040.1 Lsi02g01904 656646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g01904 292 Gene3D - 104 257 - -
Lsi02g01904 292 SUPERFAMILY Cysteine proteinases 110 209 IPR038765 -
Lsi02g01904 292 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 106 290 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Lsi02g01904 292 PANTHER UBIQUITIN THIOESTERASE OTU1 106 290 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g01904 K13719 - csv:101222942 371.318