Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g01904 | ATGGAATTCTTCAAGCTTTTTGACATGTTTATGATTTCTTGTTCTGAGTTTACCATGTTGAGGTTGTTGGTTATTCAGTTCATTAAAGAGCAGCAAGTTTTCGATAAAGCTCTTCGGTTCCTCCTCGATGCTTCGAAGACGATCGCTTTCGCTTTGTTTCTATCTCTTCTCGCTCTAGGAAGCAATAATGGAGAGCTTGATGGATGGGAAGGGACTGATGAACTGGGCAAGCAACTTTTCGGAGTATATGTATCGAGAGATATCGGAGTTCGTCGACGTTGTCGGAGAAAGTTGTGTGGAAGGGATGTCAATGGAGAGTATGTTATGGACCATGATAAACACAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTATTGTTCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCAATCGAGCTTTCGATACTATCCGAATATTATGGACGTGAAATAGCAGCATATGATATCCAGACCACACGATGTGATTTGTACGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCAGCTGAGGGGGCTCCAGAGGAATTTGATCAGACCATATTTTCGGTGAATAGGGACAGGACGATTGGGCCGATTGAGGAGCAAGCTCTTCATTTTGTTAAAGAGCAACAAAGGAAAAGGAGATTCACTGACACTGCCAACTTCACGCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATTGGCCAAGCGGAGGCCGTCGAACACGCAAAAGCCACTGGCCATGTCAACTTTCAAGAGTATAGATGA | 879 | 44.03 | MEFFKLFDMFMISCSEFTMLRLLVIQFIKEQQVFDKALRFLLDASKTIAFALFLSLLALGSNNGELDGWEGTDELGKQLFGVYVSRDIGVRRRCRRKLCGRDVNGEYVMDHDKHKATELRQVIAATVASDPTRYSEAFLGKPNEEYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPAEGAPEEFDQTIFSVNRDRTIGPIEEQALHFVKEQQRKRRFTDTANFTLRCGVCQIGVIGQAEAVEHAKATGHVNFQEYR | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24971894 | 24980899 | + | Lsi02G019040.1 | Lsi02g01904 | 656646 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g01904 | 292 | Gene3D | - | 104 | 257 | - | - | |
Lsi02g01904 | 292 | SUPERFAMILY | Cysteine proteinases | 110 | 209 | IPR038765 | - | |
Lsi02g01904 | 292 | PANTHER | HIV-INDUCED PROTEIN-7-LIKE PROTEASE | 106 | 290 | IPR039138 | GO:0004843|GO:0016579|GO:0030433|GO:0101005 | |
Lsi02g01904 | 292 | PANTHER | UBIQUITIN THIOESTERASE OTU1 | 106 | 290 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g01904 | K13719 | - | csv:101222942 | 371.318 |