Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02019 ATGTCAACACTGAATAACCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCTCCCTCCCCATGACCAAATGACAACCTCCCACAACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCCGTCCTCGGCGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGTGTTGGTGCCGTCAAGCACGATGTCAAGGCCATGATCCTCACTGGCTTTGCCGGCCTCATTGCTGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCCGTCTACTCTCAATTGGATATAGAAATGGCCCATATAAAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTGCCCAACCCTCTTCAGGCGGCAGCAGCTTCAGCCTTGGCCTTTTCCATAGGGGCAATAGTGCCACTATTGGCCGCAGCGTTCATAAAGGAGTATAGGATCCGACTCGGGGTGGTGGTGGTGGCAGTGACAGTGGCACTAGTAGGGTTTGGTTGGCTGGGAGCAACATTAGGGAAGGCGCCAACGATCAGGTCGGTGACTGACTTCCTAATATGGAGTATCTTCTAG 624 52.88 MSTLNNQSSSLNSCTKFPLPPHDQMTTSHNHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIKRNKDHRKELEEEEREKLPNPLQAAAASALAFSIGAIVPLLAAAFIKEYRIRLGVVVVAVTVALVGFGWLGATLGKAPTIRSVTDFLIWSIF 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26203892 26204818 + Lsi02G020190.1 Lsi02g02019 656761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02019 207 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 31 203 - -
Lsi02g02019 207 Pfam VIT family 124 205 IPR008217 GO:0005384|GO:0030026
Lsi02g02019 207 Pfam VIT family 50 131 IPR008217 GO:0005384|GO:0030026
Lsi02g02019 207 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 203 IPR008217 GO:0005384|GO:0030026
Lsi02g02019 207 Coils Coil 111 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02019 Lsi-Chr2:26203892 Lsi08g00551 Lsi-Chr8:13677376 1.08E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02019 K22736 - csv:101210510 321.627