Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02066 ATGAAAGAGGAAGATTTGGTTGGGAGCTTAGATGAGATTGTGTTTGGTAACACATCAACAAAACCCATCAAGATGACCACTACTACCATTTTAACGAGGATTGAATATCTTGCTTCTATCTCCTTCAAAGAATTGCTTATCAACAGGAAGAGCACACTTGCCTTAAAATCCTCAAACTTAACCCAACAATTTCCAACCGTGCTTGTTTGGGACAAGCATGGGTGGCCCACAGCCGAATGGAGAATCACAACTCTGCATGTGAGCTCCATCAATCGAACTCTGCACTCTCACTCACTCACCGTTGATCTTCATCACTATTCCCAGTCAAAAGATCATGGGACACGTATCGGACGGTGGAGAATATGGGAGGAAGCAGCCCCTGTACGATGTGATTCCTTACATTTTCCTTCTTCTTCTTCCTCTTCTTCCTCTTCTTTTTCTTCTGATGTTCAGCTTCTTTTGGGAAAGATCAGAGCTTCACTTGAAGGAGACACTCAAAACTTGCTTTTGTCTTCATGGAATTACTCTCTGCCTGTTTGCCAATGGAGGGGACTCAAATGGGTCTTCTCTACTGGAACTCCACTGGTCTGCAGTGATTCTTCTTCTCCACAGTGGTCTAATCTCACTCTGTTCAAAGACCCTTCTCTTCATGTTCTCTCTCTGCAACTTCCATCTGCTAATCTCACTGGTTCGTTGCCCAAGGAGCTTGGTGAGTTCACTATGCTCCAAAGCCTCTATCTAAGTATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTTTTGACTGGAGCTCTTCCACCCTCGATCTGGAATCTGTGTGATAAACTTGTTTCTGTCAGACTTCATGCCAATTCATTATCTGGGTCTCTGCCAGAGCCGGCTTTACCAAACTCCACCTGCAAGAATTTGGAGGCTTTGGATTTGGGCAACAATCAGATTTCAGGTACTTTCCCAGAATTCATTACTAGATTTCAGGGTCTGAAAGAGCTTGATCTTGGGAAAAATTTGTTGTCTGGGCAAATCCCTCAGAGCTTAGGCCAGTTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCCGTCTTTAGTAACTCAAAGTTTGGTGTTGAGGCTTTTGAAGGGAATAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGGACCTTCTCATTTGAGTTCAGGTGCCATTGCTGGCCTTGTTATCGGCTTGATGACTGGGACGGTGGTTTTAGCTTCATTGCTTATTGGTTATATGCAAAACAAGAAGAAAAAGAGTAGGAGTGAGAGTGGAGATGAGATTGATGAAGGAGAAGATGAAGAAAATGGTGGCAGTATTGGCGCGGGCGGTGAAGGAAAGCTCATTTTGTTTCAGGGTGGTGAGCATCTGACATTGGATGATGTCTTGAATGCTACAGGGCAAGTTATGGAGAAAACAAGCTATGGCACTATATATAAGGCAAAGCTTGCTGATGGAGGCACCATTGCTCTGAGACTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTATCTGTGATTAAACAGCTGGGAAAGATTCGCCATGAGAACTTGATTCCTTTGAGAGCTTTTTATCAGGGAAAGAGAGGAGAGAAGCTCCTCATTTATGACTATCTGCCTATCAGAACTTTACATGATTTTCTACATGAGTCTAGGGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCATTAGGCATCGCCCGGGGACTAGCCCATCTTCACACAGGTCTTGAAGTGCCCATTACACATGGTAACGTTAGATCAAAAAATGTGCTCGTGGATGACTTCTTTGCAGCGAGACTGACGGAGTTCGGGCTCGACAAGCTAATGATCCCATCGGTAGCTGACGAAATCGTCTCGCTTGCAAAATCAGACGGGTACAAGGCACCGGAGTTGCAACGGATGAAGAAATGCAATTCCAGAACAGACGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAACCAGGAAAAAGTGGAAGAAGTGGAGAGTATGTGGATCTGCCATCAATGGTGAAAGTGGCAGTTTTGGAGGAGACAACAATGGAGGTTTTTGATGTGGAGGTTTTGAAAGGGATTAGAAGCCCCATGGAAGATGGAATTGTTCAGGCATTGAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCAGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGTTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACAGAAACAAGAAGTGAAATTGGTACCCCATTTTGA 2376 44.4 MKEEDLVGSLDEIVFGNTSTKPIKMTTTTILTRIEYLASISFKELLINRKSTLALKSSNLTQQFPTVLVWDKHGWPTAEWRITTLHVSSINRTLHSHSLTVDLHHYSQSKDHGTRIGRWRIWEEAAPVRCDSLHFPSSSSSSSSSFSSDVQLLLGKIRASLEGDTQNLLLSSWNYSLPVCQWRGLKWVFSTGTPLVCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCDKLVSVRLHANSLSGSLPEPALPNSTCKNLEALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGQIPQSLGQLELEKLNLSNNNFSGILPVFSNSKFGVEAFEGNSPGLCGEPLKSCAGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSRSESGDEIDEGEDEENGGSIGAGGEGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAARLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRSGEYVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEDGIVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26822626 26829697 + Lsi02G020660.1 Lsi02g02066 656808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02066 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 137 791 - -
Lsi02g02066 791 Pfam Protein tyrosine and serine/threonine kinase 495 766 IPR001245 GO:0004672|GO:0006468
Lsi02g02066 791 SUPERFAMILY L domain-like 163 382 - -
Lsi02g02066 791 MobiDBLite consensus disorder prediction 771 791 - -
Lsi02g02066 791 ProSiteProfiles Protein kinase domain profile. 491 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi02g02066 791 Gene3D Ribonuclease Inhibitor 291 409 IPR032675 -
Lsi02g02066 791 Gene3D Phosphorylase Kinase; domain 1 477 567 - -
Lsi02g02066 791 Gene3D Ribonuclease Inhibitor 150 290 IPR032675 -
Lsi02g02066 791 Gene3D Transferase(Phosphotransferase) domain 1 569 784 - -
Lsi02g02066 791 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 137 791 - -
Lsi02g02066 791 MobiDBLite consensus disorder prediction 772 791 - -
Lsi02g02066 791 MobiDBLite consensus disorder prediction 447 469 - -
Lsi02g02066 791 Pfam Leucine rich repeat 317 375 IPR001611 GO:0005515
Lsi02g02066 791 SUPERFAMILY Protein kinase-like (PK-like) 496 767 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02066 Lsi-Chr2:26822626 Lsi03g02248 Lsi-Chr3:33456316 2.93E-17 dispersed
Lsi07g00112 Lsi-Chr7:1233110 Lsi02g02066 Lsi-Chr2:26822626 6.14E-67 dispersed
Lsi09g00482 Lsi-Chr9:5067947 Lsi02g02066 Lsi-Chr2:26822626 4.01E-51 dispersed
Lsi02g02066 Lsi-Chr2:26822626 Lsi11g00286 Lsi-Chr11:2954323 2.56E-82 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83419 PF07714 PK_Tyr_Ser-Thr 3.80E-25 CL0016 Lsi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02066 - - cmo:103497530 1210.67