Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02134 ATGTCTCGAACACCGAATTATGAGTTCCAAGAATGGTGGAACAAGCAGAGAGAAAGGAACCATGATGAACACTTACAGGAAAAGTCCGACAACTTATCGACCTCACCTGCATTTCTCTCCGTTGAGATCCGGAGTTCTGGGAGCCCTGGAGATCGGATGGCCGATAAGGACCGGGCGAGGACCAGGAGTGCCCGCCAGATTTCTTGGGTTTGGCTGTTGAAATTCCAGCAGATTGCTGGTTCATTGGCTTCAATCACCAATGGCGTCGTTTATCTAATTCGTACTGCTAATCGTCGGATCTCATCGCCGGATTCTCCAGCAGATTCAGCCTCGTCTCGGCTCTACAGGATTATCAAAGTGTTTTTGATTGTAGTGCTTCTATTGCTCGTTTTTGAGCTTCTGGCGTACTTCAATGGCTGGCATTTCAGCCCCCCTTCTGTGAGTTCCGCTTCTGCGGAAGTGCTTGGAATGATGGGGTTTCTCTATGCTAATTGGCTTCAGATTCGGGCAAATTACCTGGCTCCACCGCTGCAGTACTTGACCAATCTCTGCATTTTGTTGTTCCTGATCCAGTCAGTGGATCGTTTACTTTTAATGTTTGGGTGTTTTTGGATCAAGTTCAGGCAATTGAAGCCTGTTGCGGCATTTGAGTACTCTTCCACGGACGAAAATGCTGCTACTCCTGAGGATTATCCAATGGTATTGGTGCAGATTCCCATGTGCAATGAGAGGGAGGTTTATCAACAATCGATTGCAGCTGTTTGCATCCAGGACTGGCCAAAGGATAAAATGCTTGTACAGGTTTTAGATGATTCTGATGAGCTAGATGTTCAACAACTTATCAAGGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGCATATTGTATAGACACCGCCTCATACGTACGGGCTACAAGGCAGGGAATCTCAAATCTGCAATGGGGTGCGATTATGTAAAAGACTATGAGTTTGTGGCAATCTTTGATGCAGATTTTCAGCCAGGACCAGACTTTTTAAAGAAAACAATTCCACATTTTAAGGGGAATGATGAACTTGCATTGGTCCAAACAAGGTGGTCATTTGTGAACAAAGACGAAAACTTGCTCACAAGATTGCAGAACATAAATTTATCCTTCCATTTTGAGGTCGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGTACTGCTGGAGTCTGGAGAATTAAGGCTTTGGAAGAATGTGGGGGCTGGTTAGAAAGAACAACTGTTGAGGACATGGATGTTGCAGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATATATTTAAATGATGTGAAGTGCCTTTGTGAACTTCCAGAATCATATGAAGCGTACAAGAAACAACAGCACCGCTGGCATTCGGGTCCTATGCAGTTATTTCGTTTGTGCTTCTCTGACATACTCAAATCAAAGGTGAGTTGGAAGAAGAAAGCTAATTTGATTTTTCTTTTCTTCCTCTTGCGAAAACTTGTCCTTCCATTTTATTCCTTTACCTTGTTCTGCATAATTCTCCCACTTACAATGTTCCTTCCAGAAGCCCATCTACCAGCTTGGGTCGTTTGCTATGTTCCCGGATTCATGTCCATCTTAAATATTCTTCCCGCACCGCGATCGTTTCCATTTTTAGTCCCCTATCTTCTATTTGAAAACACTATGTCTGTTACCAAATTCAATGCCATGATATCAGGGTTATTCCGCTTTGGAAGTTCATATGAATGGATAGTAACGAAAAAATTAGGACGATCATCTGAAAACAATCTTGTTGCTTTCGAAAAAGAACTAGAACCTCTAGTTGAGGGTACAAGTCTTCATCGATCTTCCTCAGAATCAGGTCTTCAGGAACTGACCAAGCTCGAGATATCGAAAAAAGCAGGGAAACACAAAAGAAATCGTCTTTATAGGAAGGAATTGGCTCTCGCATTCATTTTGTTAACTGCCTCGGCAAGAAGTTTGTTATCTGCTCAAGGAATTCACTTCTACTTCCTATTATTCCAGGGTATCACTTTTCTAGTCGTCGGTCTCGATTTAATCGGAGAGCAGGTCAGTTAA 2085 43.02 MSRTPNYEFQEWWNKQRERNHDEHLQEKSDNLSTSPAFLSVEIRSSGSPGDRMADKDRARTRSARQISWVWLLKFQQIAGSLASITNGVVYLIRTANRRISSPDSPADSASSRLYRIIKVFLIVVLLLLVFELLAYFNGWHFSPPSVSSASAEVLGMMGFLYANWLQIRANYLAPPLQYLTNLCILLFLIQSVDRLLLMFGCFWIKFRQLKPVAAFEYSSTDENAATPEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKANLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGFMSILNILPAPRSFPFLVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSENNLVAFEKELEPLVEGTSLHRSSSESGLQELTKLEISKKAGKHKRNRLYRKELALAFILLTASARSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27661481 27670824 + Lsi02G021340.1 Lsi02g02134 656876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02134 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 510 IPR029044 -
Lsi02g02134 694 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 25 693 - -
Lsi02g02134 694 PANTHER - 25 693 - -
Lsi02g02134 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 450 IPR029044 -
Lsi02g02134 694 Pfam Glycosyl transferase family group 2 326 531 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02134 Lsi-Chr2:27661481 Lsi04g02204 Lsi-Chr4:29073775 0 dispersed
Lsi02g02134 Lsi-Chr2:27661481 Lsi04g01454 Lsi-Chr4:22296233 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02134 - - csv:101216681 1322.76