Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02317 ATGCTTCCGTGGGGAGGCCTTAGTTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTATTGAAATCTGTCACGCGGGTTAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGGCAGAATGTGTATTACCTCTGATCGTTGCAATTTCTGGAAGAGTTAGCTCTGATACACCAATAAATTGTGAATTTAGTGGTTTAAGGGGTGTAATTGTGGAGGAAACGGCAGAACAACACTTTCTAAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGTAAAGAAGTCCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTGGGAGCTCGAAGTGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTATTTGAAGAGTCTGGCAGATCCCTTATGCGTGGCACTTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATAGAGCGCGTTCTACCTACTGGTACTTCATTGACTGTTGTTGGTGAGGCTGCCAAAGATGACATTGGTACCATCAGAATTCAACGTCCACACAAAGGACCATTTTATGTCTCCCCGAAAACTATTGATCAGCTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTATGCTTCCGTGGGTTTGAGTATATTTGGTTTGTATCTGGTCACAAAGCATGCTATTCTTTATCTCCTGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTCCTTGCTGCAGCTGCCAAAAGATCAATCCAAGAAAATGAAGGAGAAAATGAAAAGTCCAGCAACGGAACAGATGGTACAAAGAGAGATCGGTCAATGCCAGATCTTTGTGTAATATGTCTCGAGAGAGACTACAATGCTGTTTTTGTCCCGTAA 930 44.41 MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLEAECVLPLIVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARSATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASVGLSIFGLYLVTKHAILYLLERRRRWELQKRVLAAAAKRSIQENEGENEKSSNGTDGTKRDRSMPDLCVICLERDYNAVFVP 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29760530 29767823 + Lsi02G023170.1 Lsi02g02317 657059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02317 309 Pfam E3 Ubiquitin ligase 86 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Lsi02g02317 309 PANTHER - 1 309 IPR044231 GO:0004842|GO:0016567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02317 K15688 - csv:101218196 560.836