Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02332 ATGGCTGGGAGTAATGAAGTCAACCTTAATGAATCTAAGATTTTGAATTGGGGCTTAATGGTTTCATTTATGGGGTCTCTTCTGTTTTTTTTTTTTTTTTTAAACTTTTCCTTTGCTTTTAATGGTTATGATTTTGGGTTTTCAAGCTATCTTGCTTGTATGCTGAATTTTGGACTGGGTTTGAATTATATGTCATGGTACTTGGCTAACAATGAGCTGGTGAGAGTATATTTCTGGTATGTTTTGATTGTTTCTTCCCATTTCTTCCTACTTCTACTTGTGACTTGTGAGTCTTCTTCTGTTGAAAAGTGGAGGGAAATGTTTGGAGATAATATCCTTGTTCTTCAGGATAATCATAGGGTTGTTCCACTGAATACATGGGTGCTTATCTCCAATTTCAAGCTAGCCTACACGATCCTCCGCCGCGCAGATGGAACCTTCAACCGTGAGTTAGCAGAGTATCTCGAGCGTAAAGTTCCGGCCAATGTGATTCCGGTGGATGGGGTTTTCTCATTTGATCATGTCGATCGAGCTTCTGGCCTTCTCAACCGAGTTTACCAGCAGGCCCCAGAAAATGAAGCTCGATGGGGCATCATTGATCTTGAGAAGCCTCTAAGCACGTCAAAAGTTGTTCCTGTCATTCTGTTTTTTCATGGTGGGAGTTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACCTTTTGCCGTCGCATCGTAAGCGTCTGCAAGGCAGTTGTAGTCTCGGTTAACTACCGGCGATCGCCTGAACACCGATATCCATGTGCATATGAGGATGGCTGGGCTGCACTCAAATGGGTAAAATCAAAAACATGGTTGCAAAGTGGGAAGGATTCTAAGGTTCATGTGTATTTGGCTGGAGACAGTTCTGGTGGCAACATTGCCCATCATGTTGCAGTGAGGGCAGCTGAAGAAGACATCGAGGTACTAGGCAACATCCTTCTTCACCCGATGTTTGGGGGTGAAAAGAGAACCGAATCGGAGAAGAAACTCGATGGTAAATACTTTGTAACCATTCAAGACCGAGATTGGTACTGGAGAGCTTTTCTCCCTGAAGGAGAAGACAGAGATCATCCAGCTTGTAACATTTTTGGCCCCAAAGCCAAAAGCCTAGTAGCACTTGACTTCCCAAAAAGTTTAGTCGTCGTTGCCGGTTTGGATCTGATGCAAGATTGGCAACTTGCTTACGTGCAAGGCCTAAAAGACTCCGGTCACGACGTGAAACTTCTCTTCCTCGAGCAGGCGACAATCGGGTTCTACTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAAACAACTTCATCAACCCTTAA 1347 43.58 MAGSNEVNLNESKILNWGLMVSFMGSLLFFFFFLNFSFAFNGYDFGFSSYLACMLNFGLGLNYMSWYLANNELVRVYFWYVLIVSSHFFLLLLVTCESSSVEKWREMFGDNILVLQDNHRVVPLNTWVLISNFKLAYTILRRADGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQQAPENEARWGIIDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWRAFLPEGEDRDHPACNIFGPKAKSLVALDFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEQATIGFYFLPNNEHFYCLMEEINNFINP 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29946276 29949904 - Lsi02G023320.1 Lsi02g02332 657074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02332 448 PANTHER ARYLACETAMIDE DEACETYLASE 109 446 - -
Lsi02g02332 448 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 290 302 IPR033140 -
Lsi02g02332 448 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 214 230 IPR002168 GO:0016787
Lsi02g02332 448 SUPERFAMILY alpha/beta-Hydrolases 204 447 IPR029058 -
Lsi02g02332 448 PANTHER GIBBERELLIN RECEPTOR GID1B 109 446 - -
Lsi02g02332 448 Gene3D alpha/beta hydrolase 103 447 IPR029058 -
Lsi02g02332 448 Pfam alpha/beta hydrolase fold 214 427 IPR013094 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02332 Lsi-Chr2:29946276 Lsi06g00168 Lsi-Chr6:1847552 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02332 K14493 - csv:101219912 663.685