Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02375 ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCGAAATGCTATCACGGACGAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGGCCGTGAGCACCTCGCCGCCGCGGGGTGGTGGGTGACTCTGCAACTAGCATTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTATGTTTTTCAGAGCACTTTTCCGGCAGGGATAAAACATAAGGAGGACGTTTTGGGAGTTCTGTCGTTGATTTATTATACGCTCACTTTGATTCCTCTGTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGTGGGACATTTGCGTTGTATTCTTTGCTTTGTCGATATGTAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTGGACATTCCCAACAACCGTGTGCTGCGGGCATCATGGTTGAAGTCGCAGCTCGAGAACCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACCATGCTTGGCACCTCCATGGTCATAGGTGACGGGGTTCTCACTCCTTGCATTTCTGAGGGTGTAGTTTGCAAAGATATTAAAATTCTCATGGACTTTTGTTCACAGTTACAAAAGCCATTTGTCCTTTTTTTTGGGAGTAGTTCAATCCTTGTGTTTGTAATTATTGCAGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTAGATCTTCAATAACACAAGGTACTTCCAAGGATTCTCTTAAAAATCTCATAGCTTCCATTGGCTTCTTCAATTTTGTAAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTAACTATTTTAGAAGGAATAAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAGATCAATTCAAATAAGCATGTGTGTTGTTACGTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCTTCTTACCTTTACACACACATTAATGAAGTTGGAAACATCTTCTTCAAATCCATTCCAGATCCTTTATACTGGCCAATGTTCGTGGTGGCTGTATTATCAGCCATAATTGCAAGCCAAGCTATGATATCAGGAACATTCTCTGTAATTCAGCAATCCCTTTCACTTGGGTGTTTCCCAAGAGTTAAAATTGTTCATACTTCTTCCAAGTATGAAGGCCAAGTTTATATCCCTGAAGTTAACTTTCTACTCATGCTTGCTTGTTTGGCTGTCACTCTTGCCTTCAAGGACACTGACAAGATTGGAAATGCCTATGGTAACACTTGTTTTATACTTTCATGCTTTTGA 1398 42.49 MAGEVEIDDLNNSPEMLSRTKLRRFDSLDIESNKLDGGREHLAAAGWWVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKEDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYVRIGLIPSQQVEDREVSNYRLDIPNNRVLRASWLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISEGVVCKDIKILMDFCSQLQKPFVLFFGSSSILVFVIIAVLSAVGGIKRARSSITQGTSKDSLKNLIASIGFFNFVKFDPSVIKALNPKYIINYFRRNKTQAWISLGGIVLSITGTEALFADVGHFSVRSIQISMCVVTYPALLLAYTGQASYLYTHINEVGNIFFKSIPDPLYWPMFVVAVLSAIIASQAMISGTFSVIQQSLSLGCFPRVKIVHTSSKYEGQVYIPEVNFLLMLACLAVTLAFKDTDKIGNAYGNTCFILSCF 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30442129 30451095 - Lsi02G023750.1 Lsi02g02375 657117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02375 465 Pfam K+ potassium transporter 54 458 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lsi02g02375 465 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 458 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lsi02g02375 465 PANTHER POTASSIUM TRANSPORTER 6 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02375 Lsi-Chr2:30442129 Lsi07g00402 Lsi-Chr7:4328196 3.15E-168 dispersed
Lsi02g02374 Lsi-Chr2:30419480 Lsi02g02375 Lsi-Chr2:30442129 0 tandem
Lsi02g02375 Lsi-Chr2:30442129 Lsi03g01052 Lsi-Chr3:20254552 1.87E-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02375 K03549 - csv:101204520 667.922