Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02381 ATGGCCGGTGCTATCAAGGTTCATGGAATCCCCACTTCCACAGCCACTGGTAGGGTTCTTGCTGCCCTTTACGAGAAGGGTCTTTCATTCGAGCTTGTGAATGTCAAATTACACGAAGGGGAACACAAGAGAGAGCCCTTCCTCTCACTGAATCCCTTTGGTCAAGTTCCTGGGTTCCAAGATGGAGATCTGACGCTTTTTGAATCTAGAGCGATCACGCAGTACATCTCGGGAAATTATGCTAGTAATGGAACCCAGTTGATTCCTCAAGACCCCAAGAAAGGGGCGCTCGTATTAACGTGGATTGAGGTGGAGAGCCACCATTTTGACCCAGTAGCCATGAAACTGGTGTTCGAGCTGTGCTTGAAGCCAGTTTTTGGGTTGGGTAACCCAGATCCTGCAGTGGTTGAGCAAAGTGAAGCTGATTTAGGCAAAGTTCTTGATATCTATGAGAAAAGGCTGTCCGAGTCCAAATACTTAGGAGGTGAGTCCTTCAGTTTGGCTGATCTGCACCATCTCCCTGTTTTGGGCTACTTGTTGGCCACACAGTCCAAGAAACTGTTTGAATCTCGACCCCATGTCAATGCTTGGGTGGCTGATATCATAGCTAGGCCATCTTGGGCTAAAGTTCTTGAACTTCGCAAGTAA 648 47.84 MAGAIKVHGIPTSTATGRVLAALYEKGLSFELVNVKLHEGEHKREPFLSLNPFGQVPGFQDGDLTLFESRAITQYISGNYASNGTQLIPQDPKKGALVLTWIEVESHHFDPVAMKLVFELCLKPVFGLGNPDPAVVEQSEADLGKVLDIYEKRLSESKYLGGESFSLADLHHLPVLGYLLATQSKKLFESRPHVNAWVADIIARPSWAKVLELRK 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30492436 30493938 + Lsi02G023810.1 Lsi02g02381 657123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02381 215 SFLD Main.5: Phi-like 4 213 - -
Lsi02g02381 215 SUPERFAMILY Thioredoxin-like 5 89 IPR036249 -
Lsi02g02381 215 CDD GST_N_Phi 4 77 - -
Lsi02g02381 215 Gene3D - 91 215 - -
Lsi02g02381 215 CDD GST_C_Phi 93 211 IPR034347 -
Lsi02g02381 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Lsi02g02381 215 Pfam Glutathione S-transferase, C-terminal domain 111 205 IPR004046 -
Lsi02g02381 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 215 - -
Lsi02g02381 215 SFLD Glutathione Transferase (cytosolic) 4 213 IPR040079 -
Lsi02g02381 215 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 215 - -
Lsi02g02381 215 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Lsi02g02381 215 Gene3D Glutaredoxin 4 88 - -
Lsi02g02381 215 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Lsi02g02381 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02378 Lsi-Chr2:30474137 Lsi02g02381 Lsi-Chr2:30492436 5.52E-56 dispersed
Lsi02g02379 Lsi-Chr2:30479526 Lsi02g02381 Lsi-Chr2:30492436 8.81E-107 dispersed
Lsi02g02381 Lsi-Chr2:30492436 Lsi08g01285 Lsi-Chr8:21216527 6.99E-58 dispersed
Lsi02g02380 Lsi-Chr2:30481717 Lsi02g02381 Lsi-Chr2:30492436 5.57E-114 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02381 K00799 - csv:101212291 407.912