Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02507 ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTCCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTCGGTAAAGAGACTCGTCTTGTTGATGAAATTGAGCCCATCGATGGTGGGATTTCGATTGATCCGACTCTCAACCGTGTTCGTGCTTCCGAATCTGCTTGTTCCAGTTCTCAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGTCGATACGGCGAATGGAAGGGAATTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGACCTAGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTATCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTGTTTGATGGACATGGAGGTCCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGGCTCTTTTTTGAGGATGTTAGTTTTCCTCAAATTCCAGATATCGATGAAGTCTTGCCGGAGGAGATAGAAAATTGTCTCCAAAAAGCATTTCTTCTAGCTGATCGAGCTCTGGCTGATGATTCCAGTGTTAGTAGTTCGTCCGGAACAACGGCCCTGACAGCTCTTGTGCTTGGAAGGTATGTTTTTCCTCCCCAATGTATTGATCCTTCATACCTTTTGATAGCAATCTCTGTGTTTGTAGTTGCTGCTACTGGTTTCCATTAA 702 44.44 MVAEAEVVVCPKSLPVLEVPYFGKETRLVDEIEPIDGGISIDPTLNRVRASESACSSSQSDIKPMKKIPDSDVDTANGREFPSLRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIDEVLPEEIENCLQKAFLLADRALADDSSVSSSSGTTALTALVLGRYVFPPQCIDPSYLLIAISVFVVAATGFH 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31530512 31533214 + Lsi02G025060.1 Lsi02g02507 657249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02507 233 PANTHER PROTEIN PHOSPHATASE 2C 1 207 IPR015655 GO:0004722|GO:0006470
Lsi02g02507 233 Pfam Protein phosphatase 2C 95 204 IPR001932 -
Lsi02g02507 233 ProSiteProfiles PPM-type phosphatase domain profile. 85 233 IPR001932 -
Lsi02g02507 233 MobiDBLite consensus disorder prediction 53 79 - -
Lsi02g02507 233 Gene3D - 66 212 IPR036457 -
Lsi02g02507 233 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 207 - -
Lsi02g02507 233 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Lsi02g02507 233 SUPERFAMILY PP2C-like 80 207 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02507 Lsi-Chr2:31530512 Lsi09g01515 Lsi-Chr9:23255055 1.11E-49 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02507 K14803 - csv:101216626 335.495