Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02507 | ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTCCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTCGGTAAAGAGACTCGTCTTGTTGATGAAATTGAGCCCATCGATGGTGGGATTTCGATTGATCCGACTCTCAACCGTGTTCGTGCTTCCGAATCTGCTTGTTCCAGTTCTCAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGTCGATACGGCGAATGGAAGGGAATTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGACCTAGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTATCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTGTTTGATGGACATGGAGGTCCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGGCTCTTTTTTGAGGATGTTAGTTTTCCTCAAATTCCAGATATCGATGAAGTCTTGCCGGAGGAGATAGAAAATTGTCTCCAAAAAGCATTTCTTCTAGCTGATCGAGCTCTGGCTGATGATTCCAGTGTTAGTAGTTCGTCCGGAACAACGGCCCTGACAGCTCTTGTGCTTGGAAGGTATGTTTTTCCTCCCCAATGTATTGATCCTTCATACCTTTTGATAGCAATCTCTGTGTTTGTAGTTGCTGCTACTGGTTTCCATTAA | 702 | 44.44 | MVAEAEVVVCPKSLPVLEVPYFGKETRLVDEIEPIDGGISIDPTLNRVRASESACSSSQSDIKPMKKIPDSDVDTANGREFPSLRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIDEVLPEEIENCLQKAFLLADRALADDSSVSSSSGTTALTALVLGRYVFPPQCIDPSYLLIAISVFVVAATGFH | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31530512 | 31533214 | + | Lsi02G025060.1 | Lsi02g02507 | 657249 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02507 | 233 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 207 | IPR015655 | GO:0004722|GO:0006470 | |
Lsi02g02507 | 233 | Pfam | Protein phosphatase 2C | 95 | 204 | IPR001932 | - | |
Lsi02g02507 | 233 | ProSiteProfiles | PPM-type phosphatase domain profile. | 85 | 233 | IPR001932 | - | |
Lsi02g02507 | 233 | MobiDBLite | consensus disorder prediction | 53 | 79 | - | - | |
Lsi02g02507 | 233 | Gene3D | - | 66 | 212 | IPR036457 | - | |
Lsi02g02507 | 233 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 1 | 207 | - | - | |
Lsi02g02507 | 233 | ProSitePatterns | PPM-type phosphatase domain signature. | 124 | 132 | IPR000222 | GO:0043169 | |
Lsi02g02507 | 233 | SUPERFAMILY | PP2C-like | 80 | 207 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02507 | Lsi-Chr2:31530512 | Lsi09g01515 | Lsi-Chr9:23255055 | 1.11E-49 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02507 | K14803 | - | csv:101216626 | 335.495 |