Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02534 | ATGATGGATTCCGGCAACCTTTCCTCCTCCTCCTCCTTGCCCCCTCCAATTTCCGTCGGAAACTTCGGGCTCTGGCCACTCCTCGATGTCCAAATCTTGGAGATCTCTTTCGCTCTTTTTGTGTTCTTAGTCATCCATGTCGTTAGACAGAAGAGACATTATGACTTGCCTGTGTGGCCAATCGTTGGTATGTTACCGGCTTTGATTACAGCAACACGTGAAAATATCTACGAGTGGATTACTGACCTCTTATGTCGTCACAAGGGCACGTTTCAATTTCGAGGCCCCTGGTTTACTAGTCTCAATTGTGTCGTCACTGCTGATCCTCGAAACTTGGAGCACCTTCTCAAGACCAAATTTTCTTCCTACCCAAAAGGGTCATTCTTCCGCGACACAGTGAGAGACCTACTCGGTGACGGAATATTTGGGGCAGACGACGAGACGTGGCAACGACAGAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCGAGATTTCGACAAATGACGGTGGAGTCGTTGGTGGAGCTCGTGCACTCAAGGTTGGAAGCGGTGTTGGCGGATTTCGCGGGACGGTCGGAGGAGGTGGACCTGCAGGATGTTCTTTTGAGGTTGACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCTGGCTGCTTGCGCGTCGGATTGCCAGAAATTCCATTTGCTAAGGCCTTTGAGGATGCCACTGAAGTCACTGTTATACGCTTCATCTCACCTACTTTCGTATGGAAAGTCCTGAGGTATCTGAACTTGGGAATGGAAAAGAAGTTGAAGCAATCGATCAAAGCCGTTGACGAATTTGCAGAGAACGTGATTCAAACACGGAAGAGAGAACTCTCTATGGCAGCGCAAGCACAAGCCGATAACCAAAGATCCGACCTATTGACTGTATTCATGAAGCTAAGAGATGAGCAAGGGCGACCATTCTCCGACAAGTTTCTTAGAGATATTTGCGTCAATTTCATTCTCGCCGGAAGAGACACATCTTCCGTAGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATTCTGGTATAGAAGACAAAATTCTAGCAGAAATTTGCAGAATCGTAGGCGAACGAGAAGAGGCCAAAACCAAAGAGCTTCGATTCGATTCGTTAGTGTTCAAACCAGAGGAAATCAAGAAAATGGAGTATTTGCATGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTATGAAGAAAGGAACGAAAATCATCTATGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGATGGTCGGTTCATGAGTGAATCAGCATATCGATTCACAGCCTTCAATGGCGGCCCTCGATTGTGCCTTGGAAAGGATTTTGCGTACTATCAAATGAAATACGTCGCCGCTTCGATCATCGTCCGGTATCGAGTGGCAGTGGTGACGAACCATCCAGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAGAACGGTCTAAAGATCAATTTAATTAAACGAGAAGAGGAACAGATTTAA | 1629 | 46.9 | MMDSGNLSSSSSLPPPISVGNFGLWPLLDVQILEISFALFVFLVIHVVRQKRHYDLPVWPIVGMLPALITATRENIYEWITDLLCRHKGTFQFRGPWFTSLNCVVTADPRNLEHLLKTKFSSYPKGSFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEAVLADFAGRSEEVDLQDVLLRLTFDNVCMIAFGVDPGCLRVGLPEIPFAKAFEDATEVTVIRFISPTFVWKVLRYLNLGMEKKLKQSIKAVDEFAENVIQTRKRELSMAAQAQADNQRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNSGIEDKILAEICRIVGEREEAKTKELRFDSLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTIMKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMRDGRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIIVRYRVAVVTNHPVEPKLALTFYMKNGLKINLIKREEEQI | 542 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31830474 | 31832899 | - | Lsi02G025340.1 | Lsi02g02534 | 657276 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02534 | 542 | PRINTS | E-class P450 group I signature | 397 | 415 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | E-class P450 group I signature | 485 | 508 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | E-class P450 group I signature | 475 | 485 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | P450 superfamily signature | 398 | 409 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | P450 superfamily signature | 476 | 485 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | P450 superfamily signature | 485 | 496 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | PANTHER | CYTOCHROME P450 86B1-LIKE | 20 | 537 | - | - | |
Lsi02g02534 | 542 | Gene3D | Cytochrome P450 | 55 | 542 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 478 | 487 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi02g02534 | 542 | PANTHER | CYTOCHROME P450 | 20 | 537 | - | - | |
Lsi02g02534 | 542 | SUPERFAMILY | Cytochrome P450 | 57 | 537 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02534 | 542 | Pfam | Cytochrome P450 | 57 | 522 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02534 | Lsi-Chr2:31830474 | Lsi09g00245 | Lsi-Chr9:2581643 | 8.53E-155 | dispersed | |
Lsi11g00985 | Lsi-Chr11:16390830 | Lsi02g02534 | Lsi-Chr2:31830474 | 2.66E-103 | dispersed | |
Lsi02g02534 | Lsi-Chr2:31830474 | Lsi02g02535 | Lsi-Chr2:31836786 | 1.58E-39 | tandem | |
Lsi02g02534 | Lsi-Chr2:31830474 | Lsi03g01176 | Lsi-Chr3:22115304 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02534 | K15402 | - | csv:101212202 | 979.163 |