Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02561 ATGGCGAAGACTAAGGTTCATGAGCCATCGCGAGCGTTAGCAGGTGATACATGCACAATTCGGCTGACTGAAATTTTCGGGAGGGCGACCAAGTCTATTTTGGGCTTCTTTCTCATGGTGGGTCTTTGCAATGGCGTGCATTACCTTTTGAGGCCATTTTCTCAACCTCGCATTACCTCTGATACGATCGTAGGTTTGGTTGTTGGCAACTTCATAAGGAAGCAACTTGATATATCAACGATTAAGACGCTGCGTTATATCGTCGACTTTGGTATGATATGCTATATGTTTGTGCTGGGATTGGAGGTGGATCCATATGTACTCTTCAAAGCACCTACACGTGATGCTAAGGTAGCTTATGCTGGAATGATTTCGACACTCATCTTAGCCTGTTCCATAATCCCATTTATTAGCCTTGCAAAGTCCAAAGATATCAGTTTCATAATCTCCCTCTCAACTGTCCTTTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATTACCAGCCTGAAAATAGGTAAGTCAGATATAGGCCGGCTCGTCATTGCTGCCGGAATGCATTCTGATTTTATATCCACTCTCATGATCTGTTTTGGTTATCTCTTTTGCAAATGCCAAGAGACACGCATCTCCCTTATAAAAGGTTTTCAATTAGGTATTCTATTATTGATCCAGACAGTACTGACAGCGAAGGTTTCACCAGTATTCATGAACTGGGTAAATAACGAAAACCCTGAGGGTAAACCTATGAAAGGTCCTCACCTAGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCTGCTGCCCTACTGTATTTGGTTACAATCCGATTCTCAGTGCGTTCTTAGCTGGAACGTTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAATTGGAAAAATTAATTACCTGCTTACTACCATTTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATCCAAGTTGAGTGACTTTGAACCTGGACAAATAATGACATGGGTCAGGTTAATTTTGCTTTTTGCTATTGCAACCTTAGGAAAAGTTGTTGGTACTGTCATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTGGCTATTGCTGCAAAAACAGCTGGGAAGATAAGTACATCTACGAGCATGGTGATGGTAATTGTAATCTTCTTCACAGTCGTGCATGCTCCAAAAGTTGTAGCACATATAATCAAAAGGGCAAGGAAACGCACACCTACACATCGAATGGCTCTCCAATTGCTTGATCCATCAAGTGAGCTTAAGATCTTGTTATGTGTACATGGACCTCAGAACACTGCAGCAGCCATTAACATCATGGAGATTTCTCGGGGGACAGCTAACCCTGGGGTTGTTGTATATGTCACAGACATGATTGAACTTACAGATGAAATAGCATCCACATTAGTTCAAGGCGAAGGAGTGGACACCGTGACTGTAACCCACACAGGAGTGACACAAATGAGAGACCAAGTTACTTCTGCAGTTCAGAGCTATGTAGATGAAAATGGAGAAGGGATTACCCTTAGGAGAATGTTGGCTCTCTCAACATTCAATTCTATGGCTCAGGACATTTGCATTTTGGCAGAGGAATTGATGGGAGCTCTTATCATACTGCCATTCCACAAGAGCCAGCGTGGAGATGGGTCGTTGAGTGAGGGCCAAGCAGCTTTCCGCTATGTAAACCGCAAGGTTCTCAGGCATGCCCCCTGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGATCAGTAGAGAAAATTTCAAGATCGTATGTATCTCAAAATGTGGCAGTCATTTTCATTGGCGGTAAAGACGACCGAGAAGCATTGGCCTACGCTGGTCGAGTAGCAAGGCATCCCGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGGACTTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACAAGATGACGAATGCTTTGCCTATTTTTACGAACGGCATGTGGCTGGTGGGCACGTTGCTTACGTTGAAAAACACCTGGCCAGTTCCTCTGAGACATATTCTACTTTGAAATCACTGGAAGGGCAATACGCCCTCATAATCGTAGGTCGAGGTGGGAAGGTCAACTCGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTGGGTCCTATAGGGGATATTCTTTCCGGGTCTGAATTCTCTGTTAGGACCTCAGTTTTGATCATCCATCAACACAATCTAAAAGGAGAACTAGATGGACTTGATGATGACTTCTCAATTATGTAG 2373 43.95 MAKTKVHEPSRALAGDTCTIRLTEIFGRATKSILGFFLMVGLCNGVHYLLRPFSQPRITSDTIVGLVVGNFIRKQLDISTIKTLRYIVDFGMICYMFVLGLEVDPYVLFKAPTRDAKVAYAGMISTLILACSIIPFISLAKSKDISFIISLSTVLSSTASPVLTRLITSLKIGKSDIGRLVIAAGMHSDFISTLMICFGYLFCKCQETRISLIKGFQLGILLLIQTVLTAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCCCPTVFGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLTTIFYPIFFFWMGVESKLSDFEPGQIMTWVRLILLFAIATLGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAAKTAGKISTSTSMVMVIVIFFTVVHAPKVVAHIIKRARKRTPTHRMALQLLDPSSELKILLCVHGPQNTAAAINIMEISRGTANPGVVVYVTDMIELTDEIASTLVQGEGVDTVTVTHTGVTQMRDQVTSAVQSYVDENGEGITLRRMLALSTFNSMAQDICILAEELMGALIILPFHKSQRGDGSLSEGQAAFRYVNRKVLRHAPCSVGILVDRGLGSVEKISRSYVSQNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEEMRQDDECFAYFYERHVAGGHVAYVEKHLASSSETYSTLKSLEGQYALIIVGRGGKVNSVLTFGMNDWQQCPELGPIGDILSGSEFSVRTSVLIIHQHNLKGELDGLDDDFSIM 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32099079 32103392 + Lsi02G025610.1 Lsi02g02561 657303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02561 790 Gene3D - 443 743 - -
Lsi02g02561 790 Pfam Sodium/hydrogen exchanger family 43 419 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lsi02g02561 790 Gene3D - 29 429 IPR038770 -
Lsi02g02561 790 PANTHER CATION/H(+) ANTIPORTER 28 20 787 - -
Lsi02g02561 790 PANTHER CATION/H + ANTIPORTER 20 787 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02561 Lsi-Chr2:32099079 Lsi10g00730 Lsi-Chr10:10120813 5.47E-116 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02561 - - csv:101211645 1491.86