Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02614 ATGGGAGTTCGATTCCATTACGGCCATCCAGATGTTTTTGATAGATTGTTTCACCTTACCCGAGGGGGTGTTAGTAAAGCTTCCAAAGTCATCAACTTGAGTTTCAACTCTACATTGCGTGAAGGTAATGTTACTCATCATGAATACATACAAGTTGGTAAAGGGAGGGATGTTGGCCTCAACCAGATCTCAATGTTTGAGGCTAAGATAGCCAATGGTAATGGCGAACAGACATTAAGCCGTGATATGTACAGGCTAGGTCATCGATTTGATTTCTTTCGCATGTTGTCTTGTTATTTCACAACCATTGGTTTCTATTTCAGTACTATGCTGACAGTGCTCACAGTCTATGTCTTTCTATATGGCCGCCTTTACCTTGTTCTCAGTGGCCTTGAAAAAGCTTTGAGTACTCACCCAGCCATTAAAGACAACAAGTCCCTTCAAACAGCTCTTATTTCACAGTCCGCTGTGCAAATTGGACTTCTGATGGCATTGCCTATGATGGTTGAAATAGGACTGGAAAGGGGATTTCGAGCAGCTTTAAGTGATTTCATACTAATGCAGCTGCAGCTTGCACCTGTGTTTTTCACTTTCTCTTTAGGAACCAAAACACATTATTATGGAAGGACATTGCTTCATGGGGGTGCGCAATACAGAGGTACCGGTCGTGGTTTTGTGGTGTTCCATGCCAAATTTGCTGACAATTATAGGATGTATTCTCGCAGTCATTTTGTCAAAGGAATTGAATTGATGATTCTTCTTCTGGTTTACCACATACTTGGCGTTTCATATAGAGGTGTGGTTGCTCATGTCTTGATCACCATATCAATATGGTTTATGGTAGGAACATGGCTTTTTGCACCTTTCCTCTTCAATCCATTAGGCTTTGAGTGGCAAAAGATAGTTGATGACTGGACAGATTGGAAAAAATGGATTGTCAACCGTGGAGGAATCGGAGTATCTCCTGATAAAAGTTGGGAGTCTTGGTGGGAAAAAGAACATGAACATCTACATTACTCCGGAAAGCGTGGCATCTTCGTTGAGATATTATTGTCACTACGATTTTTCATCTTTCAATATGGACTAGTGTATCACTTGAAAATAATTGACTCCCAAAGTTTTCTGGTACGAATATTGTTCCCACATTCTTACCAATTCCTTGGTTTAACCGAGCATATAAGCATATTTATTCTACTTCAAATTTCAGGTTTATGGCCTTTCTTGGGTTGTGATCATTTCAATATTGCTCCTGATGAAGGTAAGAAATTTGTTATTCCGGATCCTCATCCCGCTGTATCCGTTGGACGACGTAAATTCAGTGCAAGCTTTCAGTTGTTATTTAGGCTGGCCGAGGGTTTTATTTTCATTATCTGCGTGGCTGGTTTCATAACTTTAGTTGCAATCCCTCATATGACAATCAGGGACATCATTCTTTGCATTCTTGCCTTCTTGCCAACAGGATGGGGCCTGCTTTTGGTGAGTTTACTGAAACATCTCCATGCTAGATACACTTTAGATATTGCCCAAGCTTGTAGGCCCTTAATTCATCATACTGCATTATGGGGATCTGTTCGCGCTCTGGCTCGGAGTTACGAAATTGTCATGGGGTTGCTTCTGTTCACACCTGTAGCATTTCTAGCCTGGTTTCCATTCGTTTCAGAGTTCCAGACACGAATGCTTTTTAACCAAGCATTCAGTAGAGGTCTGCAAATTTCTCGCATTCTTGGGGGGCCTAGCAAAAAGGAAAAGAGTTCCTTCACAGACAAAGAGTAA 1773 41.29 MGVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDMYRLGHRFDFFRMLSCYFTTIGFYFSTMLTVLTVYVFLYGRLYLVLSGLEKALSTHPAIKDNKSLQTALISQSAVQIGLLMALPMMVEIGLERGFRAALSDFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAQYRGTGRGFVVFHAKFADNYRMYSRSHFVKGIELMILLLVYHILGVSYRGVVAHVLITISIWFMVGTWLFAPFLFNPLGFEWQKIVDDWTDWKKWIVNRGGIGVSPDKSWESWWEKEHEHLHYSGKRGIFVEILLSLRFFIFQYGLVYHLKIIDSQSFLVRILFPHSYQFLGLTEHISIFILLQISGLWPFLGCDHFNIAPDEGKKFVIPDPHPAVSVGRRKFSASFQLLFRLAEGFIFIICVAGFITLVAIPHMTIRDIILCILAFLPTGWGLLLVSLLKHLHARYTLDIAQACRPLIHHTALWGSVRALARSYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPSKKEKSSFTDKE 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32580556 32584462 - Lsi02G026140.1 Lsi02g02614 657356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02614 590 PANTHER CALLOSE SYNTHASE 2 3 376 IPR026953 GO:0003843
Lsi02g02614 590 PANTHER CALLOSE SYNTHASE 2 431 585 IPR026953 GO:0003843
Lsi02g02614 590 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 3 376 - -
Lsi02g02614 590 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 431 585 - -
Lsi02g02614 590 Pfam 1,3-beta-glucan synthase component 1 345 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02614 Lsi-Chr2:32580556 Lsi11g01625 Lsi-Chr11:24589546 0 dispersed
Lsi02g02614 Lsi-Chr2:32580556 Lsi02g02618 Lsi-Chr2:32607259 0 proximal
Lsi02g02614 Lsi-Chr2:32580556 Lsi06g00462 Lsi-Chr6:5209926 2.36E-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02614 K11000 - csv:101221120 967.992