Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02637 ATGGCTGTTGAATCTAACCAAACTAACGAATTCATTTTCCGTTCAAAGCTTCCCGATATTCACATTCCCAATCATCTTCCACTCCACGATTACGTTTTCCAAAATCTGTCTAAATTCGCCTCCCGACCCTGTTTGATCAACGGCGCCACCGGCGATGTTTACTCCTACAACGACGTTCAGATAACGGCACGTCGAGTTGCCGCCGGCCTACACAAACTCGGAATTAAAAAGGGTGACGTCATCATGAATTTGCTTCCCAACTCCCCGGAGTTCGTCTTCACCTTCCTCGGCGCGTCCTACCGGGGCGCCATAATGACGGCGGCGAACCCTTTTTACACGGCCGTGGAAATCGCAAAACAGGCAAAAGCCGCCAATGCGAAATTGATCGTGACGATGGCTTGCTTTTACGATCGGGTTAAGGATTTGGCTGAAAATGGTGTCAAAATCGTGTGTGTTGATTTTGCCGTTGAGGGTTGTTCGCATTTCTCTGTTTTGAGTGGGGCTGATGAATCTAGCTTGCCGCCGGTGGAATTTTCCCCCGATGACGTGGTGGCGCTTCCGTATTCCTCCGGTACCACCGGTTTGCCGAAGGGAGTTATGTTGACGCATAAAGGGTTAATCACAAGCGTGGCTCAACAAATGGACGGCCAAAATCCGAACCTCCATTATCACAGCGATGATGTTATCCTCTGTGTGCTGCCGTTTTTCCACATCTATTCACTCAATTCCATTTTGCTGTGTGGGCTACGCGTCGGCGCTGCGATTATGATTATGCAGAAATTTGACATTGTTTCACTTTTACAATTGATTGAGAAACACAGAATCTCGATCATGCCCATCGTGCCGCCGATCTTTGTGGCCATTGCTAAGTCGCCGGACTTTGAGAAATACGACGTGTCGTCAGTGAGGGTACTCAAATCCGGTGGAGCTCCACTGGGGAAGGAGCTGGAAGACGCCGTGAGGGAGAAATTTCCGGCGGCGGTTCTCGGACAGGGGTATGGAATGACCGAGGCCGGTCCGGTTCTGAGCATGAGTTTAGCTTTTGCGAAAGAACCGTTTCAAGTGAAAGCCGGAGCTTGCGGAACTGTGGTCCGAAATGCAGAGATGAAGATTGTGGACCCGGAAACTGGCGCTTCCTTGCCGGCGAATTCCGCCGGAGAGATTTGTATTAGAGGTGATCAGATCATGAAGGGATATTTGAATGATTTGGAGTCAACCAAGAGGACTATTGACAAAGAAGGATGGCTTCACACCGGCGACATCGGCCTCATCGACGACGATGGCGAGCTCTTCATTGTCGACCGACTTAAGGAACTTATCAAATTCAAGGCCTTTCAAGTGGCGCCCGCCGAGCTGGAGGCCCTTCTTATCACCCACCCAAAACTATCTGATGCTGCTGTTATTGGTATGCCAGATGTGGAGGCCGGAGAAGTACCAGTAGCATTTGTGGTGAAAGCGAATGGCGGCGCAATAACAGAGGAAGAAGTAAAGCAATTCATAGCAAAACAAGTGGTGTTCTACAAGAGGTTAAAACGTGTGTTTTTCGTCAACGCTATTCCAAAGGCCCCATCTGGAAAAATCCTTAGAAAAGAACTCAGAGCAAAACTGGCTTATGGTGCTTATCATTAA 1629 49.11 MAVESNQTNEFIFRSKLPDIHIPNHLPLHDYVFQNLSKFASRPCLINGATGDVYSYNDVQITARRVAAGLHKLGIKKGDVIMNLLPNSPEFVFTFLGASYRGAIMTAANPFYTAVEIAKQAKAANAKLIVTMACFYDRVKDLAENGVKIVCVDFAVEGCSHFSVLSGADESSLPPVEFSPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQMDGQNPNLHYHSDDVILCVLPFFHIYSLNSILLCGLRVGAAIMIMQKFDIVSLLQLIEKHRISIMPIVPPIFVAIAKSPDFEKYDVSSVRVLKSGGAPLGKELEDAVREKFPAAVLGQGYGMTEAGPVLSMSLAFAKEPFQVKAGACGTVVRNAEMKIVDPETGASLPANSAGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDIGLIDDDGELFIVDRLKELIKFKAFQVAPAELEALLITHPKLSDAAVIGMPDVEAGEVPVAFVVKANGGAITEEEVKQFIAKQVVFYKRLKRVFFVNAIPKAPSGKILRKELRAKLAYGAYH 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32793313 32795177 - Lsi02G026370.1 Lsi02g02637 657379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02637 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Lsi02g02637 542 SUPERFAMILY Acetyl-CoA synthetase-like 10 537 - -
Lsi02g02637 542 Pfam AMP-binding enzyme 35 442 IPR000873 -
Lsi02g02637 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Lsi02g02637 542 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 538 - -
Lsi02g02637 542 Gene3D - 437 538 IPR045851 -
Lsi02g02637 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 538 - -
Lsi02g02637 542 Gene3D - 3 436 IPR042099 -
Lsi02g02637 542 CDD 4CL 22 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02635 Lsi-Chr2:32778201 Lsi02g02637 Lsi-Chr2:32793313 0 dispersed
Lsi02g02637 Lsi-Chr2:32793313 Lsi03g01245 Lsi-Chr3:23048096 0 dispersed
Lsi02g02636 Lsi-Chr2:32784508 Lsi02g02637 Lsi-Chr2:32793313 1.28E-38 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02637 K01904 - csv:101218361 999.579