Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02659 AATTCGACTATGGTAACTCCCGCAGAGGAGACGCCACATCGGAGCCTCTGGAATTCCAACGTTGATCTCCTGTTGCCGAGTATGCACACAGCGAGCATCTACTTCTACCGCCCTACCGGCGCCACCAATTTCTTCGACACTGAGGTTCTCAAGGAAGGCCTAAGCAAGGCGTTGGTTCTTTTTTATCCACTAGCCGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCGAATGTAATGCCAAAGGTGTGCTTTTTGTCGAGGCTGAGTCCACGGCAGTTATCGATGATTTCAGTGATTTCGCGCCAACGTTGCAGCACCAGCAGCTTATTCCGGCCATCGATTACTCCGGGGGAATCGATTCGTATTCGTTACTGGTGTTACAAGTGACACACTTCAAATGTGATGCCATTTCACTTGGCGTTGGAATGCAGCACATTGTAGCGGACGACTTCTCTGGTATCCACTTCGTCAACACCTGGTCCGACATGACGAGTGGCGTCGACCTCAAGCTTCGACCTTACATTGATAGGACACTCCTCCGTGCGCGGGACCCACCTCAACCGACCTTCCAACACGTTGAATATCAACCAGGCCCAACCATGAAAACTTCAGTCCAACCTGACTCGAACGAAATAACCGCCTCCATCTTCAAATTCACCCTAGAGCAGCTTAATTTACTCAAAGGCAAATCCAAAGAAAGCGGCAACATCACCAACTACAGCTCCTTCGAGATGCTCTCCGGCCACATATGGCGATGCACGTGTAAGGCACGCGACCTTCTAGCGGATCAAGACACTAAGCTCTATTTCACCATCAACGGTCGTGCTCGGTTGCGCCCACCACTCCCCAATGGCTACTTCGGCAATGTCGTCTTTGTAGCAACATCGCTCGGCATTGCCGACGAACTAATGTCGAATCCTACGTGGTTCGCCTCTAGTAAGATCCACGACACCTTGCTTCGGATGGACAACGATTATTTGAGATCGGCTTTGGACTATCTCGAGATTCTACATGGCATATCATCGTTGCTCAATGGTGTTCATTCTTGTGAATGCCTCAACCTACATATCACAAGTTGGGTTCGACTGCCGATTTACGATGTCGATTTTGGGTGGGGACGACCGATTTTTATGGGACCCGGTAGAATTGAATGCGACGGAACGTCTTTTATAATCCCGAGTGCTTCCGTTGACGGCAGCTTGTCGGTGGTAATTTCGCTGCATAATCGACATATGAAGAATTCAACTATGGTGACTCCAGCGGAGGAAACGCCGCATCGGAGCCTCTGGAATTCCAATGTCGATCTCCTCGTGCTGAGTATGCATACGGCGAGCATCTACTTCTACCGCCCTACCGGCGCCACCAATTTCTTCAACGTTGAGGTTCTCAAGGAAGGCCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCCGGACGGTTGAGACACGATGAAGACGGTCGAATCGAGATCAACTGCAATTCTGAAGGTGTGCTTTTTGTCGAGGCTGAGTCCACGGCGGTTATCGACGATTTCGGTGATTTTGCGCCAACGTTGCAGCTCCAACAACTTATTCCGGTCGTCGATTACTCTGGCGGAATCGAGTCGTATCCGTTACTGGTGTTACAAGTGACACACTTCAAATGTGGTGCCGTTTCACTCGGCATTGGAATGCAGCACATTGTAGCAGACGGCTTCTCCGGTCTCCACTTTGTCAACACCTGGTCTGAAATGTCGCGTGGCATCGACCTTAAGCTTCGACCTTACATCGACCGAACCCTCCTCCATGCACGGGACCCACCTCAACCGATCTTCCAACATGTTGAATATCAACCAAGCCCAACGATGAAAACTCTAGTCCAACCTGACTCGGACGAAATAATCGTCTCCATGTTCAAATTCACCCAAGAGCAACTTAATTTACTCAAAGCCAAATCCAAAGAAAGCGGTAACACCACCAATTATAGCTCGTACGAGATGCTCTCAGGCCACATATGGCGGTGCATATGTATGGCGCGTGACCTTCCAGCAGATCAAGACACTAAGCTCTATTTTGTCGTCGACGGTCGTGCCCGGTTGCGCCCACCACTCCCCAACGGCTACTTCGGCAATGTCATCTTTCTAGGGATATCGCTCGGAATTGCCGGCGAACTAATGTCGAATCCAACGTGGTTCGCTGCAGGTAAAATCCACGACACCTTGATTCAAATGGACAACGATTATTTGAGATCGGCTTTGGACTATCTCGAGATTCATGGCCTATTGCCATTGCTCAATGGTGCTCATGGTCACGAGTACCCCAATGTGGGGATCGCGACCTGGGTGTGGCTGCCAATTTATGACGCTGATTTTGGGTGGGGACGACCGATTTTTATGGGCCCCGGCAGAATCAAATGCGAAGGATCGTCTTTTATAATTCCGAGTATTTCCAATGATGGCAGCTTGTCAGTGGTAATTTCGTTGCATAGTCGACATATGAAGGTGCTTAAGAAGCTATTCTTTGATATTTGA 2517 49.74 NSTMVTPAEETPHRSLWNSNVDLLLPSMHTASIYFYRPTGATNFFDTEVLKEGLSKALVLFYPLAGRLRRDEDGRIEIECNAKGVLFVEAESTAVIDDFSDFAPTLQHQQLIPAIDYSGGIDSYSLLVLQVTHFKCDAISLGVGMQHIVADDFSGIHFVNTWSDMTSGVDLKLRPYIDRTLLRARDPPQPTFQHVEYQPGPTMKTSVQPDSNEITASIFKFTLEQLNLLKGKSKESGNITNYSSFEMLSGHIWRCTCKARDLLADQDTKLYFTINGRARLRPPLPNGYFGNVVFVATSLGIADELMSNPTWFASSKIHDTLLRMDNDYLRSALDYLEILHGISSLLNGVHSCECLNLHITSWVRLPIYDVDFGWGRPIFMGPGRIECDGTSFIIPSASVDGSLSVVISLHNRHMKNSTMVTPAEETPHRSLWNSNVDLLVLSMHTASIYFYRPTGATNFFNVEVLKEGLSKALVPFYPMAGRLRHDEDGRIEINCNSEGVLFVEAESTAVIDDFGDFAPTLQLQQLIPVVDYSGGIESYPLLVLQVTHFKCGAVSLGIGMQHIVADGFSGLHFVNTWSEMSRGIDLKLRPYIDRTLLHARDPPQPIFQHVEYQPSPTMKTLVQPDSDEIIVSMFKFTQEQLNLLKAKSKESGNTTNYSSYEMLSGHIWRCICMARDLPADQDTKLYFVVDGRARLRPPLPNGYFGNVIFLGISLGIAGELMSNPTWFAAGKIHDTLIQMDNDYLRSALDYLEIHGLLPLLNGAHGHEYPNVGIATWVWLPIYDADFGWGRPIFMGPGRIKCEGSSFIIPSISNDGSLSVVISLHSRHMKVLKKLFFDI 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33025606 33036668 - Lsi02G026590.1 Lsi02g02659 657401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02659 838 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 415 - -
Lsi02g02659 838 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 2 415 - -
Lsi02g02659 838 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 413 837 - -
Lsi02g02659 838 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 413 837 - -
Lsi02g02659 838 Pfam Transferase family 415 833 - -
Lsi02g02659 838 Gene3D - 416 614 IPR023213 -
Lsi02g02659 838 Gene3D - 1 199 IPR023213 -
Lsi02g02659 838 MobiDBLite consensus disorder prediction 189 208 - -
Lsi02g02659 838 Gene3D - 204 415 IPR023213 -
Lsi02g02659 838 Gene3D - 621 838 IPR023213 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02659 Lsi-Chr2:33025606 Lsi02g02661 Lsi-Chr2:33069688 0 dispersed
Lsi09g01123 Lsi-Chr9:18035250 Lsi02g02659 Lsi-Chr2:33025606 1.15E-12 dispersed
Lsi02g02658 Lsi-Chr2:33007173 Lsi02g02659 Lsi-Chr2:33025606 1.62E-69 tandem
Lsi02g02659 Lsi-Chr2:33025606 Lsi02g02660 Lsi-Chr2:33043556 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02659 K13065 - csv:101214857 688.723