Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02661 ATGGAGAAAAACCGCTTATGCAAAGGAAGGACACGTGTCGGTCGAAGGAACGGCCTTACGGGTGATTGTGGTAGGTGGATCACCGTGCCTCCCGTTTCCCCTTTCTCTTATTTATACGGGCGATTTCATTTCTCCCTGAAAATACTAGTAATAACTCCATTTTCTCCTTCAATTTTTACTTCCGTTTTCTTCTTCTTCATCTTCCATTTCACTCCCCACCGATTGTTAGATCATATCAAGATGATTATCACCGTGAAGGATTCGACTATGGTGACTCCGGCGGAGGAGACGCCGCATCAGAGCCTCTGGAATTCCAACATCGATCTCGTGGTGCCGAGTATGCACACGCCCAGCGTCTACTTCTACCGCCCTACCGGCGCCTCCAATTTCTTCGATGCTGAGGTTCTCAAGGAAGGACTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCCGGACGGTTGAGACGCGATGAAGACGGTCGAATTGAGATCAACTGTAATGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACTACGGCGGTTATCGACGATTTTGGTGATTTCGCGCCGACGTTGCAGCTCCGGCAGCTTATTCCGGCCGTCGATTACTCCGGCGGAATCGAATCGTATCCGTTGCTGGTGTTACAGTCATATGCACATGATGATAACATGCAAAATTCAGAAGTAATCTCTCAAGCAAACAGAGCACTTTTTTCTTCTAGAAATCAAAACAATTCCATTAAATGGCAGAATTTATGGTTTCGTACTGTGACATACTTCAAATGCGGTGGAGTTTCGCTCGGCGTTGGAATGCAGCATCATGTAGCAGACGGCTTCTCCGGTCTCCACTTCGTCAACACTTGGTCCGATATGTCGCGTGGCCTCGACCTCAAGCTTCGGCCTTACATCGATCGAACCCTCCTCCGTGCACGGGACCCACCTCAACCGACCTTTCGACACGTTGAATATCAACCGGCCCCACCCATGAAAAACCCGGTCCAACCCGACTCGGAAGGAACCACCGTCTCCATTTTCAAATTCAATCGGGAGCAGCTTAATTTACTCAAAGCCAAATCCAAAGAAAATGGCAACACCACAAATTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGGTGCACGTGCAAGGCGCGTGACCTTCCAGAGGATCAAGACACTAAGCTTTACATCGCCACCGACGGTCGTGCTCGATTGCGCCCGCCACTCCCCAATGGCTACTTTGGCAATGTCATCTTTACAGCGACGCCGCTTGCCGTCGCCGGCGAACTAATGTCGAATCCGACGTGGTTCGCCGCCGGCAAGATCCACGACGCCTTGATTCGGATGGACAACGATTATTTGAGATCGGCTTTGGATTATCTTGAGATTCAGCCGAACATATCGGCATTGGTTCGTGGTGCTCATACTTTTCGTTGCCCCAATTTGGGGATCACGAGTTGGGTTCGGTTGCCGATTCACGACGCTGATTTCGGGTGGGGCCGACCGATTTTTATGGGCCCTGGCGGAATCGCATACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGACGGCAGCTTGTCAGTAGCGATTTCGCTGCAAAATCGACATATGAAGGTTTTTGAGAAGTTGTTCTTTGATATTTGA 1653 50.33 MEKNRLCKGRTRVGRRNGLTGDCGRWITVPPVSPFSYLYGRFHFSLKILVITPFSPSIFTSVFFFFIFHFTPHRLLDHIKMIITVKDSTMVTPAEETPHQSLWNSNIDLVVPSMHTPSVYFYRPTGASNFFDAEVLKEGLSKALVPFYPMAGRLRRDEDGRIEINCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQSYAHDDNMQNSEVISQANRALFSSRNQNNSIKWQNLWFRTVTYFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMSRGLDLKLRPYIDRTLLRARDPPQPTFRHVEYQPAPPMKNPVQPDSEGTTVSIFKFNREQLNLLKAKSKENGNTTNYSSYEMLSGHVWRCTCKARDLPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTATPLAVAGELMSNPTWFAAGKIHDALIRMDNDYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33069688 33075801 - Lsi02G026610.1 Lsi02g02661 657403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02661 550 MobiDBLite consensus disorder prediction 315 337 - -
Lsi02g02661 550 Gene3D - 77 325 IPR023213 -
Lsi02g02661 550 Gene3D - 330 550 IPR023213 -
Lsi02g02661 550 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 84 217 - -
Lsi02g02661 550 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 233 549 - -
Lsi02g02661 550 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 233 549 - -
Lsi02g02661 550 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 84 217 - -
Lsi02g02661 550 Pfam Transferase family 82 216 - -
Lsi02g02661 550 Pfam Transferase family 237 545 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g01675 Lsi-Chr1:15303775 Lsi02g02661 Lsi-Chr2:33069688 7.65E-51 dispersed
Lsi02g02659 Lsi-Chr2:33025606 Lsi02g02661 Lsi-Chr2:33069688 0 dispersed
Lsi02g02661 Lsi-Chr2:33069688 Lsi06g01658 Lsi-Chr6:26839428 1.67E-74 dispersed
Lsi02g02660 Lsi-Chr2:33043556 Lsi02g02661 Lsi-Chr2:33069688 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02661 K13065 - csv:101214857 828.165