Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02726 ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGTTAGCAAGCGGCGAGAAAGGACAGCTAACACACTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAACAGCATCACCTTGAGCTTCAATCCTTGATTAGGAAAGTACAGGAAGAAGGATTAGATCTTCAGACAACTAAGAATGAAGATCATTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGTTGCCTTATGGCTTATGTGCATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCACGTCTGAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGGGTGCTCGATGATATCGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACTTCATTCCATACATTTTCTTAAACGAACAGACGCTGAACAATACATCTCACGGGGATTAATGGAGGAGCTTAGAGGCTAA 603 40.46 MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLIWKIVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33592350 33595563 + Lsi02G027260.1 Lsi02g02726 657468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02726 200 SUPERFAMILY GINS helical bundle-like 1 147 IPR036224 -
Lsi02g02726 200 CDD GINS_A_psf1 3 137 IPR005339 GO:0000811|GO:0006260
Lsi02g02726 200 Gene3D - 1 135 - -
Lsi02g02726 200 Pfam GINS complex protein 48 117 IPR021151 -
Lsi02g02726 200 PANTHER PARTNER OF SLD5 1 196 IPR005339 GO:0000811|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02726 K10732 - csv:101205409 397.512