Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02759 | ATGAGAAAAGAAGAAAATCATATCAGGGCTAATATTGGAGAATTCCCTGGTAGAGTTACGCGTGCTCGGGCCGCTGCATTTAGTGCGTCAGCACAGCTGCCTCCAAAAGTTCCTGCACATCAACAGGAGACGCGTGTTGCACGAGCTAATCTGAAAAGAGCTGCTTCTGAAGAAAATAGCTGCCATTCTATTGCTAAATCATCTCGACCATGTAAAAGGAGGGCTGTGCTTCAGGACGTCAGCAATATAGGCTGTGAACCTTCGTACTCAAAATGTTTCAATGCAGCTAAAATTGAGCCCAATAGTAGTAAGCCGACAATCAGAAACCGTCTCAAGAAGTCCAAAGGAGCCTCATCAGTTGGTGTGGCTAACTCCAAGGTTCCTCTAGGTCTTAGAACCAAAGGAGCTTCATCAGTTGGTGTGGCTTACTCCAAGCCTCTTGATCTTAGAACACAAGGTGTACAAGCAAACATAAAATCAAAAGCTAAGTTGAAAGTTGAGCGTTCAAGTCATTCTGAAGACCCCGAGACCCATCATCGGGTAGGTGGTATAAAGGAAGAGGTCACAAGTGATTTTCGAGATGATAATTGGAGGTCTCAAAGTCCTTCAGAGTCTCAAAATTTTCAAAATAAGGAGAAACCGTTGCTTCTGGGGACAAGAAGCAACCTGGACATTACAGATATTGATTGTAATGACAGAGATGCTCAGCTGTGCACTGTCTATGCTCAGGATATCTATAACAATTTACGTGTTGCTGAGCTAACCAGAAGACCACGTACCAATTTCATGGAAACAGTGCAGACTGATATTACCCAAAGCATGCGGGGTATATTGGTTGATTGGCTTGTAGAGGAAGTAACACCGGTGGTCCTTGTGCCCTCCAGGAAGTATGAAGAAATTTGTGCACCACGTGTTGAAGACTTTTGTTTCATTACTGACAGCACCTACACAAAAGAGGAGGTATTGAATATGGAAGGTCAAATATTGAAGCATATGGGCTTTCAACTATCTGCACCAACTGCAAAATCTTTCCTCAGGAGATATGTTCGAGCTGCACAAACGACATATAAGAACCCTAGTCTTGAACTCGAGTGCCTCGCCAACTATCTAGCCGAATTAACACTGGTTGACTATGGTTTCTTGAATTTTCTTCCCTCAGTTATAGCTGCATCAGCTGTATTTCTTTCCAAATGGACGTTGGATCAATCAAGTCACCCATGGAATTCAACACTGGAATATTATACCTCATACAAAGCATCAGATCTGAAACAAACCGTTGTTGCTTTACAAGATTTACAGTTGAACACCAACGGGTGTCCACTTAGTTCGATTCGCACCAAGTATCGGCAAGAAAAGTTCAAAGCCGTTGCAACTTTGTCTTCCCCAAAATTACTTGATACGCTATTCTGA | 1410 | 42.84 | MRKEENHIRANIGEFPGRVTRARAAAFSASAQLPPKVPAHQQETRVARANLKRAASEENSCHSIAKSSRPCKRRAVLQDVSNIGCEPSYSKCFNAAKIEPNSSKPTIRNRLKKSKGASSVGVANSKVPLGLRTKGASSVGVAYSKPLDLRTQGVQANIKSKAKLKVERSSHSEDPETHHRVGGIKEEVTSDFRDDNWRSQSPSESQNFQNKEKPLLLGTRSNLDITDIDCNDRDAQLCTVYAQDIYNNLRVAELTRRPRTNFMETVQTDITQSMRGILVDWLVEEVTPVVLVPSRKYEEICAPRVEDFCFITDSTYTKEEVLNMEGQILKHMGFQLSAPTAKSFLRRYVRAAQTTYKNPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSSHPWNSTLEYYTSYKASDLKQTVVALQDLQLNTNGCPLSSIRTKYRQEKFKAVATLSSPKLLDTLF | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33845487 | 33852024 | - | Lsi02G027590.1 | Lsi02g02759 | 657501 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02759 | 469 | Pfam | Cyclin, N-terminal domain | 244 | 284 | IPR006671 | - | |
Lsi02g02759 | 469 | Pfam | Cyclin, N-terminal domain | 296 | 336 | IPR006671 | - | |
Lsi02g02759 | 469 | SMART | Cyclin_C_2 | 339 | 462 | IPR004367 | - | |
Lsi02g02759 | 469 | SMART | cyclin_7 | 243 | 330 | IPR013763 | - | |
Lsi02g02759 | 469 | SMART | cyclin_7 | 343 | 431 | IPR013763 | - | |
Lsi02g02759 | 469 | Gene3D | - | 331 | 466 | - | - | |
Lsi02g02759 | 469 | MobiDBLite | consensus disorder prediction | 160 | 213 | - | - | |
Lsi02g02759 | 469 | MobiDBLite | consensus disorder prediction | 100 | 121 | - | - | |
Lsi02g02759 | 469 | PANTHER | CYCLIN-A2-4 | 294 | 469 | - | - | |
Lsi02g02759 | 469 | PANTHER | CYCLIN-A2-4 | 52 | 284 | - | - | |
Lsi02g02759 | 469 | SUPERFAMILY | Cyclin-like | 234 | 336 | IPR036915 | - | |
Lsi02g02759 | 469 | Gene3D | - | 258 | 284 | - | - | |
Lsi02g02759 | 469 | MobiDBLite | consensus disorder prediction | 199 | 213 | - | - | |
Lsi02g02759 | 469 | MobiDBLite | consensus disorder prediction | 161 | 198 | - | - | |
Lsi02g02759 | 469 | CDD | CYCLIN | 339 | 426 | IPR013763 | - | |
Lsi02g02759 | 469 | Pfam | Cyclin, C-terminal domain | 339 | 461 | IPR004367 | - | |
Lsi02g02759 | 469 | Gene3D | - | 291 | 330 | - | - | |
Lsi02g02759 | 469 | Gene3D | - | 244 | 257 | - | - | |
Lsi02g02759 | 469 | SUPERFAMILY | Cyclin-like | 339 | 464 | IPR036915 | - | |
Lsi02g02759 | 469 | PIRSF | Cyclin_A_B_D_E | 289 | 468 | IPR039361 | - | |
Lsi02g02759 | 469 | PIRSF | Cyclin_A_B_D_E | 35 | 294 | IPR039361 | - | |
Lsi02g02759 | 469 | PANTHER | CYCLINS | 294 | 469 | IPR039361 | - | |
Lsi02g02759 | 469 | PANTHER | CYCLINS | 52 | 284 | IPR039361 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02759 | Lsi-Chr2:33845487 | Lsi08g00456 | Lsi-Chr8:12228253 | 1.12E-76 | dispersed | |
Lsi02g02759 | Lsi-Chr2:33845487 | Lsi08g01152 | Lsi-Chr8:20147136 | 5.75E-82 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02759 | K06627 | - | csv:101222299 | 809.29 |