Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02862 | ATGGCTGCTCTTCTTCGAGCAATCTTTCTCTTCTCTCTCATCATCCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGATCGATGCTTCAAAGAAGACCTTCATTGTGCAGGTTCACAAAGATGCCAAGCCTTCTATTTTCCCAACCCACAAGCACTGGTATGAGTCCTCTCTAGCCTCCATCTCTTCAAACAAGGCAACGACGTCAAACCCAGATGCTTCTGGTACTGATGGAGGAGCCATCATTCATACATATGAAACTGTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTCTGAAGTTGAGAAGCTTCAAACTTTCCCCCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCCTCACACTACTCGTTCCCCTGAGTTTCTCGGCCTTAAGACATCCGACAGTGCTGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATAGGTGTCATTGATACTGGTATTTGGCCGGAGAGGCAGAGTTTCAATGACCGCGATCTGGGTCCCATTCCTTCCAAATGGAAAGGCCAGTGCTTGGAGGCTAAAGACTTTCCAGCCACCTCTTGCAACCGTAAACTCATTGGGGCTCGATTCTTCTGCAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGTACCGCTCGCCGCGAGATTCCGATGGCCACGGTACACACACAGCGTCCATTGCTGCAGGTCGTTATGTGTTTCCGGCTTCAACTTTAGGCTATGCTCGTGGTAAAGCCGCCGGAATGGCTCCTAAGGCCCGTCTTGCCGCCTATAAAGTGTGCTGGAACGCCGGCTGCTACGACTCCGACATTCTTGCAGCTTTTGATGCTGCTGTTTCCGACGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCGTATTATCTCGATGCCATAGCTATTGGGGCTTTTAGAGCGGTGGCAGACGGCGTTTTTGTCTCGGCATCAGCCGGTAATGGTGGCCCAGGTGGGCTCACCGTGACTAATGTCGCACCGTGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGTTATTCTCGGTACTAGTGTCTACGGTGGACCGGCTTTGGTTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACCGAAGGCGGTGATGGATATTCTTCGTCTCTATGCTTAGAAGGTTCATTGAACCCCAATTCAGTGAAAGGGAAGATTGTACTATGTGATAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGATTGGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTGGCTGACTGCCACGTACTACCTGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATTCGCAAATATATTGCAGAAGCAGCGAAGTCTCATTCACCGCCAACCGCCACAATTTTGTTCAAGGGAACTCGGCTTGGAGTTAGGCCAGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTAAAGCCTGATGTGATTGCGCCAGGGTTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGGCCTTCTGGAATTCCCACAGACAAGCGTTTTACCGAGTTCAACATACTTTCTGGCACTTCTATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCCCTGCTGAAGGCGGCACACCCAGGATGGAGTCCAGCAGCTATAAAATCAGCCCTAATGACCACAGCTTATACTTTGGACAATCGGGGTGAGACGATGTTAGATGAATCTTCAGGCAATACTTCCACGGTCTTGGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCGATGGACCCTGGTTTAATCTATGACCTGAACACATATGATTATGTTGATTTCTTGTGCAACTCCAACTACACCACAAAGAATATCCAAGTTATTACAGGGAAGATTGCAGATTGTAGTGGGGCGAAAAGGGCTGGACATACTGGGAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAGCATAAGATGTCTACACATTTCATAAGAACTGTGACTAACGTTGGGGATGCCAATTCCATCTATAAGGTATCAATAAAGCCACCAAGTGGAATTTCAGTGACAGTGGAACCAGAAAAGCTGGCGTTTAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAACATGAAGAGTGGTTCTATAGTTTGGACTGATGGAAAACACGAAGTCACGAGTCCTTTGGTTGTTACCATGCAGCAACCTCTGCAGTAG | 2388 | 48.79 | MAALLRAIFLFSLIIPFSSSSSSSSSSSSIDASKKTFIVQVHKDAKPSIFPTHKHWYESSLASISSNKATTSNPDASGTDGGAIIHTYETVFHGFSAKLSPSEVEKLQTFPHIASIIPEQVRHPHTTRSPEFLGLKTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGQCLEAKDFPATSCNRKLIGARFFCSGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVADGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNSVKGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSHSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRFTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNSNYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVSIKPPSGISVTVEPEKLAFRRVGQKLSFLVRVQAMAVRLSPGSSNMKSGSIVWTDGKHEVTSPLVVTMQQPLQ | 795 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 34835744 | 34838131 | + | Lsi02G028620.1 | Lsi02g02862 | 657604 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02862 | 795 | Pfam | PA domain | 391 | 479 | IPR003137 | - | |
Lsi02g02862 | 795 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.5 | 13 | 794 | - | - | |
Lsi02g02862 | 795 | Pfam | Fibronectin type-III domain | 684 | 788 | IPR041469 | - | |
Lsi02g02862 | 795 | Gene3D | Peptidase S8/S53 domain | 152 | 649 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi02g02862 | 795 | CDD | PA_subtilisin_like | 364 | 497 | - | - | |
Lsi02g02862 | 795 | SUPERFAMILY | PA domain | 415 | 471 | IPR046450 | - | |
Lsi02g02862 | 795 | Gene3D | - | 653 | 791 | - | - | |
Lsi02g02862 | 795 | PRINTS | Subtilisin serine protease family (S8) signature | 565 | 581 | IPR015500 | - | |
Lsi02g02862 | 795 | PRINTS | Subtilisin serine protease family (S8) signature | 228 | 241 | IPR015500 | - | |
Lsi02g02862 | 795 | PRINTS | Subtilisin serine protease family (S8) signature | 150 | 169 | IPR015500 | - | |
Lsi02g02862 | 795 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 129 | 636 | - | - | |
Lsi02g02862 | 795 | Gene3D | - | 358 | 505 | - | - | |
Lsi02g02862 | 795 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED | 13 | 794 | - | - | |
Lsi02g02862 | 795 | CDD | Peptidases_S8_3 | 123 | 602 | IPR034197 | - | |
Lsi02g02862 | 795 | SUPERFAMILY | Protease propeptides/inhibitors | 34 | 123 | - | - | |
Lsi02g02862 | 795 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 125 | IPR037045 | - | |
Lsi02g02862 | 795 | SUPERFAMILY | Subtilisin-like | 125 | 640 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi02g02862 | 795 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 566 | 576 | IPR023828 | - | |
Lsi02g02862 | 795 | Pfam | Subtilase family | 150 | 617 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi02g02862 | 795 | Pfam | Peptidase inhibitor I9 | 36 | 123 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02862 | Lsi-Chr2:34835744 | Lsi05g01289 | Lsi-Chr5:20693666 | 0 | dispersed | |
Lsi02g02862 | Lsi-Chr2:34835744 | Lsi10g00488 | Lsi-Chr10:7018143 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02862 | - | - | csv:101210434 | 1464.9 |