Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02862 ATGGCTGCTCTTCTTCGAGCAATCTTTCTCTTCTCTCTCATCATCCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGATCGATGCTTCAAAGAAGACCTTCATTGTGCAGGTTCACAAAGATGCCAAGCCTTCTATTTTCCCAACCCACAAGCACTGGTATGAGTCCTCTCTAGCCTCCATCTCTTCAAACAAGGCAACGACGTCAAACCCAGATGCTTCTGGTACTGATGGAGGAGCCATCATTCATACATATGAAACTGTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTCTGAAGTTGAGAAGCTTCAAACTTTCCCCCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCCTCACACTACTCGTTCCCCTGAGTTTCTCGGCCTTAAGACATCCGACAGTGCTGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATAGGTGTCATTGATACTGGTATTTGGCCGGAGAGGCAGAGTTTCAATGACCGCGATCTGGGTCCCATTCCTTCCAAATGGAAAGGCCAGTGCTTGGAGGCTAAAGACTTTCCAGCCACCTCTTGCAACCGTAAACTCATTGGGGCTCGATTCTTCTGCAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGTACCGCTCGCCGCGAGATTCCGATGGCCACGGTACACACACAGCGTCCATTGCTGCAGGTCGTTATGTGTTTCCGGCTTCAACTTTAGGCTATGCTCGTGGTAAAGCCGCCGGAATGGCTCCTAAGGCCCGTCTTGCCGCCTATAAAGTGTGCTGGAACGCCGGCTGCTACGACTCCGACATTCTTGCAGCTTTTGATGCTGCTGTTTCCGACGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCGTATTATCTCGATGCCATAGCTATTGGGGCTTTTAGAGCGGTGGCAGACGGCGTTTTTGTCTCGGCATCAGCCGGTAATGGTGGCCCAGGTGGGCTCACCGTGACTAATGTCGCACCGTGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGTTATTCTCGGTACTAGTGTCTACGGTGGACCGGCTTTGGTTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACCGAAGGCGGTGATGGATATTCTTCGTCTCTATGCTTAGAAGGTTCATTGAACCCCAATTCAGTGAAAGGGAAGATTGTACTATGTGATAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGATTGGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTGGCTGACTGCCACGTACTACCTGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATTCGCAAATATATTGCAGAAGCAGCGAAGTCTCATTCACCGCCAACCGCCACAATTTTGTTCAAGGGAACTCGGCTTGGAGTTAGGCCAGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTAAAGCCTGATGTGATTGCGCCAGGGTTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGGCCTTCTGGAATTCCCACAGACAAGCGTTTTACCGAGTTCAACATACTTTCTGGCACTTCTATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCCCTGCTGAAGGCGGCACACCCAGGATGGAGTCCAGCAGCTATAAAATCAGCCCTAATGACCACAGCTTATACTTTGGACAATCGGGGTGAGACGATGTTAGATGAATCTTCAGGCAATACTTCCACGGTCTTGGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCGATGGACCCTGGTTTAATCTATGACCTGAACACATATGATTATGTTGATTTCTTGTGCAACTCCAACTACACCACAAAGAATATCCAAGTTATTACAGGGAAGATTGCAGATTGTAGTGGGGCGAAAAGGGCTGGACATACTGGGAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAGCATAAGATGTCTACACATTTCATAAGAACTGTGACTAACGTTGGGGATGCCAATTCCATCTATAAGGTATCAATAAAGCCACCAAGTGGAATTTCAGTGACAGTGGAACCAGAAAAGCTGGCGTTTAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAACATGAAGAGTGGTTCTATAGTTTGGACTGATGGAAAACACGAAGTCACGAGTCCTTTGGTTGTTACCATGCAGCAACCTCTGCAGTAG 2388 48.79 MAALLRAIFLFSLIIPFSSSSSSSSSSSSIDASKKTFIVQVHKDAKPSIFPTHKHWYESSLASISSNKATTSNPDASGTDGGAIIHTYETVFHGFSAKLSPSEVEKLQTFPHIASIIPEQVRHPHTTRSPEFLGLKTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGQCLEAKDFPATSCNRKLIGARFFCSGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVADGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNSVKGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSHSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRFTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNSNYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVSIKPPSGISVTVEPEKLAFRRVGQKLSFLVRVQAMAVRLSPGSSNMKSGSIVWTDGKHEVTSPLVVTMQQPLQ 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34835744 34838131 + Lsi02G028620.1 Lsi02g02862 657604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02862 795 Pfam PA domain 391 479 IPR003137 -
Lsi02g02862 795 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 13 794 - -
Lsi02g02862 795 Pfam Fibronectin type-III domain 684 788 IPR041469 -
Lsi02g02862 795 Gene3D Peptidase S8/S53 domain 152 649 IPR036852 GO:0004252|GO:0006508
Lsi02g02862 795 CDD PA_subtilisin_like 364 497 - -
Lsi02g02862 795 SUPERFAMILY PA domain 415 471 IPR046450 -
Lsi02g02862 795 Gene3D - 653 791 - -
Lsi02g02862 795 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Lsi02g02862 795 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Lsi02g02862 795 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Lsi02g02862 795 ProSiteProfiles Serine proteases, subtilase domain profile. 129 636 - -
Lsi02g02862 795 Gene3D - 358 505 - -
Lsi02g02862 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 13 794 - -
Lsi02g02862 795 CDD Peptidases_S8_3 123 602 IPR034197 -
Lsi02g02862 795 SUPERFAMILY Protease propeptides/inhibitors 34 123 - -
Lsi02g02862 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 125 IPR037045 -
Lsi02g02862 795 SUPERFAMILY Subtilisin-like 125 640 IPR036852 GO:0004252|GO:0006508
Lsi02g02862 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Lsi02g02862 795 Pfam Subtilase family 150 617 IPR000209 GO:0006508|GO:0008236
Lsi02g02862 795 Pfam Peptidase inhibitor I9 36 123 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02862 Lsi-Chr2:34835744 Lsi05g01289 Lsi-Chr5:20693666 0 dispersed
Lsi02g02862 Lsi-Chr2:34835744 Lsi10g00488 Lsi-Chr10:7018143 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02862 - - csv:101210434 1464.9